RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 FAM198BQ6UWH4 519 aa8.93□□□□□ -0.98
PRKCH-208ENST00000553846 IGFL3Q6UXB1 125 aa8.93□□□□□ -0.98
PRKCH-208ENST00000553846 MON1BQ7L1V2 547 aa8.93□□□□□ -0.98
PRKCH-208ENST00000553846 CHST15Q7LFX5 561 aaPredicted RBP8.93□□□□□ -0.98
PRKCH-208ENST00000553846 ZNF677Q86XU0 584 aa8.93□□□□□ -0.98
PRKCH-208ENST00000553846 PHF13Q86YI8 300 aaPredicted RBP8.93□□□□□ -0.98
PRKCH-208ENST00000553846 HSCBQ8IWL3 235 aa8.93□□□□□ -0.98
PRKCH-208ENST00000553846 RHOT1Q8IXI2 618 aa8.93□□□□□ -0.98
PRKCH-208ENST00000553846 IQCKQ8N0W5 287 aa8.93□□□□□ -0.98
PRKCH-208ENST00000553846 AOPEPQ8N6M6 819 aa8.93□□□□□ -0.98
PRKCH-208ENST00000553846 AVL9Q8NBF6 648 aa8.93□□□□□ -0.98
PRKCH-208ENST00000553846 MOCOSQ96EN8 888 aa8.93□□□□□ -0.98
PRKCH-208ENST00000553846 POM121Q96HA1 1249 aa8.93□□□□□ -0.98
PRKCH-208ENST00000553846 ZNF599Q96NL3 588 aa8.93□□□□□ -0.98
PRKCH-208ENST00000553846 PEBP4Q96S96 227 aa8.93□□□□□ -0.98
PRKCH-208ENST00000553846 CNPY3Q9BT09 278 aa8.93□□□□□ -0.98
PRKCH-208ENST00000553846 RIOK2Q9BVS4 552 aaKnown RBP8.93□□□□□ -0.98
PRKCH-208ENST00000553846 GANQ9H2C0 597 aa8.93□□□□□ -0.98
PRKCH-208ENST00000553846 PDCL3Q9H2J4 239 aa8.93□□□□□ -0.98
PRKCH-208ENST00000553846 STN1Q9H668 368 aaKnown RBP8.93□□□□□ -0.98
PRKCH-208ENST00000553846 SP110Q9HB58 689 aa8.93□□□□□ -0.98
PRKCH-208ENST00000553846 GPATCH2LQ9NWQ4 482 aa8.93□□□□□ -0.98
PRKCH-208ENST00000553846 PCDHGA10Q9Y5H3 936 aa8.93□□□□□ -0.98
PRKCH-208ENST00000553846 MDC1Q14676 2089 aaKnown RBP8.93□□□□□ -0.98
PRKCH-208ENST00000553846 SVILO95425 2214 aa8.93□□□□□ -0.98
PRKCH-208ENST00000553846 IGHV5-51A0A0C4DH38 117 aa8.92□□□□□ -0.98
PRKCH-208ENST00000553846 A0A0J9YYE9 177 aa8.92□□□□□ -0.98
PRKCH-208ENST00000553846 GOLGA6CA6NDK9 693 aa8.92□□□□□ -0.98
PRKCH-208ENST00000553846 GOLGA6BA6NDN3 693 aa8.92□□□□□ -0.98
PRKCH-208ENST00000553846 NUAK1O60285 661 aa8.92□□□□□ -0.98
PRKCH-208ENST00000553846 FGFR1OPO95684 399 aaKnown RBP8.92□□□□□ -0.98
PRKCH-208ENST00000553846 PRLP01236 227 aa8.92□□□□□ -0.98
PRKCH-208ENST00000553846 TRBC1P01850 177 aa8.92□□□□□ -0.98
PRKCH-208ENST00000553846 PYGLP06737 847 aa8.92□□□□□ -0.98
PRKCH-208ENST00000553846 GOLGA6DP0CG33 693 aa8.92□□□□□ -0.98
PRKCH-208ENST00000553846 CYP2A6P11509 494 aaPredicted RBP8.92□□□□□ -0.98
PRKCH-208ENST00000553846 SLC2A4P14672 509 aa8.92□□□□□ -0.98
PRKCH-208ENST00000553846 CTPS1P17812 591 aa8.92□□□□□ -0.98
PRKCH-208ENST00000553846 ERCC2P18074 760 aa8.92□□□□□ -0.98
PRKCH-208ENST00000553846 HNRNPH3P31942 346 aaKnown RBP8.92□□□□□ -0.98
PRKCH-208ENST00000553846 RORAP35398 523 aa8.92□□□□□ -0.98
PRKCH-208ENST00000553846 RENBPP51606 427 aa8.92□□□□□ -0.98
PRKCH-208ENST00000553846 JAM2P57087 298 aa8.92□□□□□ -0.98
PRKCH-208ENST00000553846 TUBB3Q13509 450 aa8.92□□□□□ -0.98
PRKCH-208ENST00000553846 MAN2A1Q16706 1144 aa8.92□□□□□ -0.98
PRKCH-208ENST00000553846 ALG1LQ6GMV1 187 aa8.92□□□□□ -0.98
PRKCH-208ENST00000553846 CERS6Q6ZMG9 384 aa8.92□□□□□ -0.98
PRKCH-208ENST00000553846 RFX8Q6ZV50 586 aa8.92□□□□□ -0.98
PRKCH-208ENST00000553846 USP45Q70EL2 814 aa8.92□□□□□ -0.98
PRKCH-208ENST00000553846 RAVER1Q8IY67 606 aaKnown RBP8.92□□□□□ -0.98
PRKCH-208ENST00000553846 CISD2Q8N5K1 135 aaKnown RBP8.92□□□□□ -0.98
PRKCH-208ENST00000553846 LZTR1Q8N653 840 aa8.92□□□□□ -0.98
PRKCH-208ENST00000553846 ZBTB2Q8N680 514 aa8.92□□□□□ -0.98
PRKCH-208ENST00000553846 EXD1Q8NHP7 514 aa8.92□□□□□ -0.98
PRKCH-208ENST00000553846 UBE2Q2Q8WVN8 375 aa8.92□□□□□ -0.98
PRKCH-208ENST00000553846 LRFN5Q96NI6 719 aa8.92□□□□□ -0.98
PRKCH-208ENST00000553846 KCTD15Q96SI1 283 aaPredicted RBP8.92□□□□□ -0.98
PRKCH-208ENST00000553846 STK33Q9BYT3 514 aa8.92□□□□□ -0.98
PRKCH-208ENST00000553846 NDST4Q9H3R1 872 aa8.92□□□□□ -0.98
PRKCH-208ENST00000553846 RMI1Q9H9A7 625 aa8.92□□□□□ -0.98
PRKCH-208ENST00000553846 SLC40A1Q9NP59 571 aa8.92□□□□□ -0.98
PRKCH-208ENST00000553846 GOLGA6AQ9NYA3 693 aa8.92□□□□□ -0.98
PRKCH-208ENST00000553846 SLC23A2Q9UGH3 650 aa8.92□□□□□ -0.98
PRKCH-208ENST00000553846 ZNHIT2Q9UHR6 403 aa8.92□□□□□ -0.98
PRKCH-208ENST00000553846 FARSAQ9Y285 508 aaKnown RBP8.92□□□□□ -0.98
PRKCH-208ENST00000553846 B3GNT3Q9Y2A9 372 aa8.92□□□□□ -0.98
PRKCH-208ENST00000553846 CNTRLQ7Z7A1 2325 aa8.91□□□□□ -0.98
PRKCH-208ENST00000553846 EIF3CLB5ME19 914 aaKnown RBP8.91□□□□□ -0.98
PRKCH-208ENST00000553846 CHUKO15111 745 aa8.91□□□□□ -0.98
PRKCH-208ENST00000553846 EPHB6O15197 1021 aa8.91□□□□□ -0.98
PRKCH-208ENST00000553846 MAFKO60675 156 aa8.91□□□□□ -0.98
PRKCH-208ENST00000553846 SNX2O60749 519 aa8.91□□□□□ -0.98
PRKCH-208ENST00000553846 TMEM63AO94886 807 aa8.91□□□□□ -0.98
PRKCH-208ENST00000553846 HSP90AA1P07900 732 aaKnown RBP8.91□□□□□ -0.98
PRKCH-208ENST00000553846 RAB40ALP0C0E4 278 aa8.91□□□□□ -0.98
PRKCH-208ENST00000553846 ZNF30P17039 623 aa8.91□□□□□ -0.98
PRKCH-208ENST00000553846 HSPA9P38646 679 aaKnown RBP8.91□□□□□ -0.98
PRKCH-208ENST00000553846 NOP2P46087 812 aaKnown RBP8.91□□□□□ -0.98
PRKCH-208ENST00000553846 GPR18Q14330 331 aa8.91□□□□□ -0.98
PRKCH-208ENST00000553846 CLEC16AQ2KHT3 1053 aa8.91□□□□□ -0.98
PRKCH-208ENST00000553846 ZNF789Q5FWF6 425 aa8.91□□□□□ -0.98
PRKCH-208ENST00000553846 RALGPS1Q5JS13 557 aa8.91□□□□□ -0.98
PRKCH-208ENST00000553846 VWA5B1Q5TIE3 1220 aa8.91□□□□□ -0.98
PRKCH-208ENST00000553846 CACHD1Q5VU97 1274 aa8.91□□□□□ -0.98
PRKCH-208ENST00000553846 TRIM72Q6ZMU5 477 aa8.91□□□□□ -0.98
PRKCH-208ENST00000553846 Q6ZS92 163 aa8.91□□□□□ -0.98
PRKCH-208ENST00000553846 FAM92BQ6ZTR7 304 aa8.91□□□□□ -0.98
PRKCH-208ENST00000553846 ZNF547Q8IVP9 402 aa8.91□□□□□ -0.98
PRKCH-208ENST00000553846 ST6GALNAC3Q8NDV1 305 aa8.91□□□□□ -0.98
PRKCH-208ENST00000553846 ZNF514Q96K75 400 aaPredicted RBP8.91□□□□□ -0.98
PRKCH-208ENST00000553846 LURAP1Q96LR2 239 aa8.91□□□□□ -0.98
PRKCH-208ENST00000553846 MCEEQ96PE7 176 aa8.91□□□□□ -0.98
PRKCH-208ENST00000553846 LYSMD1Q96S90 227 aa8.91□□□□□ -0.98
PRKCH-208ENST00000553846 EIF3CQ99613 913 aaKnown RBP8.91□□□□□ -0.98
PRKCH-208ENST00000553846 SNRNP25Q9BV90 132 aaKnown RBP8.91□□□□□ -0.98
PRKCH-208ENST00000553846 CARD9Q9H257 536 aa8.91□□□□□ -0.98
PRKCH-208ENST00000553846 CHST8Q9H2A9 424 aa8.91□□□□□ -0.98
PRKCH-208ENST00000553846 FAM207AQ9NSI2 230 aaPredicted RBP8.91□□□□□ -0.98
PRKCH-208ENST00000553846 GPR83Q9NYM4 423 aa8.91□□□□□ -0.98
PRKCH-208ENST00000553846 DTLQ9NZJ0 730 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms