RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 VPS35Q96QK1 796 aa17.51■□□□□ 0.39
FOXN3-204ENST00000553840 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.51■□□□□ 0.39
FOXN3-204ENST00000553840 B3GNT4Q9C0J1 378 aa17.51■□□□□ 0.39
FOXN3-204ENST00000553840 TBC1D29Q9UFV1 150 aa17.51■□□□□ 0.39
FOXN3-204ENST00000553840 ACSL6Q9UKU0 697 aa17.51■□□□□ 0.39
FOXN3-204ENST00000553840 PCDHB11Q9Y5F2 797 aa17.51■□□□□ 0.39
FOXN3-204ENST00000553840 SPO11Q9Y5K1 396 aa17.51■□□□□ 0.39
FOXN3-204ENST00000553840 MACROD2A1Z1Q3 448 aa17.5■□□□□ 0.39
FOXN3-204ENST00000553840 KMOO15229 486 aa17.5■□□□□ 0.39
FOXN3-204ENST00000553840 ATXN7O15265 892 aaPredicted RBP17.5■□□□□ 0.39
FOXN3-204ENST00000553840 VEGFDO43915 354 aa17.5■□□□□ 0.39
FOXN3-204ENST00000553840 ZNF189O75820 626 aaPredicted RBP17.5■□□□□ 0.39
FOXN3-204ENST00000553840 ANXA9O76027 345 aa17.5■□□□□ 0.39
FOXN3-204ENST00000553840 PTMAP06454 111 aaKnown RBP17.5■□□□□ 0.39
FOXN3-204ENST00000553840 ZNF8P17098 575 aaPredicted RBP17.5■□□□□ 0.39
FOXN3-204ENST00000553840 CSTF2P33240 577 aaKnown RBP eCLIP17.5■□□□□ 0.394e-7■■■■□ 19.8
FOXN3-204ENST00000553840 CLCNKAP51800 687 aa17.5■□□□□ 0.39
FOXN3-204ENST00000553840 VAV2P52735 878 aa17.5■□□□□ 0.39
FOXN3-204ENST00000553840 RWDD2BP57060 319 aa17.5■□□□□ 0.39
FOXN3-204ENST00000553840 RHDQ02161 417 aa17.5■□□□□ 0.39
FOXN3-204ENST00000553840 CLN3Q13286 438 aa17.5■□□□□ 0.39
FOXN3-204ENST00000553840 GTF2H3Q13889 308 aa17.5■□□□□ 0.39
FOXN3-204ENST00000553840 C16orf72Q14CZ0 275 aa17.5■□□□□ 0.39
FOXN3-204ENST00000553840 NOMO1Q15155 1222 aa17.5■□□□□ 0.39
FOXN3-204ENST00000553840 INSCQ1MX18 579 aa17.5■□□□□ 0.39
FOXN3-204ENST00000553840 SIRPB2Q5JXA9 342 aa17.5■□□□□ 0.39
FOXN3-204ENST00000553840 NKAIN2Q5VXU1 208 aa17.5■□□□□ 0.39
FOXN3-204ENST00000553840 TMEM71Q6P5X7 295 aa17.5■□□□□ 0.39
FOXN3-204ENST00000553840 ZNF574Q6ZN55 896 aaPredicted RBP17.5■□□□□ 0.39
FOXN3-204ENST00000553840 LRRTM4Q86VH4 590 aa17.5■□□□□ 0.39
FOXN3-204ENST00000553840 CDKL3Q8IVW4 592 aaPredicted RBP17.5■□□□□ 0.39
FOXN3-204ENST00000553840 IPMKQ8NFU5 416 aa17.5■□□□□ 0.39
FOXN3-204ENST00000553840 GDAP1Q8TB36 358 aa17.5■□□□□ 0.39
FOXN3-204ENST00000553840 USP7Q93009 1102 aa17.5■□□□□ 0.39
FOXN3-204ENST00000553840 MRGPRX2Q96LB1 330 aa17.5■□□□□ 0.39
FOXN3-204ENST00000553840 CCDC74BQ96LY2 380 aa17.5■□□□□ 0.39
FOXN3-204ENST00000553840 TTC25Q96NG3 672 aa17.5■□□□□ 0.39
FOXN3-204ENST00000553840 BBC3Q96PG8 261 aaPredicted RBP17.5■□□□□ 0.39
FOXN3-204ENST00000553840 CCNL2Q96S94 520 aaPredicted RBP17.5■□□□□ 0.39
FOXN3-204ENST00000553840 BAG1Q99933 345 aaPredicted RBP17.5■□□□□ 0.39
FOXN3-204ENST00000553840 OSBPL8Q9BZF1 889 aa17.5■□□□□ 0.39
FOXN3-204ENST00000553840 OSGEPL1Q9H4B0 414 aa17.5■□□□□ 0.39
FOXN3-204ENST00000553840 BPIFA1Q9NP55 256 aa17.5■□□□□ 0.39
FOXN3-204ENST00000553840 ARFGAP3Q9NP61 516 aa17.5■□□□□ 0.39
FOXN3-204ENST00000553840 KLC4Q9NSK0 619 aa17.5■□□□□ 0.39
FOXN3-204ENST00000553840 SSUH2Q9Y2M2 353 aa17.5■□□□□ 0.39
FOXN3-204ENST00000553840 PKP3Q9Y446 797 aa17.5■□□□□ 0.39
FOXN3-204ENST00000553840 PCYT1BQ9Y5K3 369 aaPredicted RBP17.5■□□□□ 0.39
FOXN3-204ENST00000553840 RCCD1A6NED2 376 aa17.49■□□□□ 0.39
FOXN3-204ENST00000553840 ERVH48-1M5A8F1 160 aa17.49■□□□□ 0.39
FOXN3-204ENST00000553840 AURKAO14965 403 aa17.49■□□□□ 0.39
FOXN3-204ENST00000553840 CHUKO15111 745 aa17.49■□□□□ 0.39
FOXN3-204ENST00000553840 CDK14O94921 469 aa17.49■□□□□ 0.39
FOXN3-204ENST00000553840 TJP3O95049 919 aa17.49■□□□□ 0.39
FOXN3-204ENST00000553840 LIPCP11150 499 aa17.49■□□□□ 0.39
FOXN3-204ENST00000553840 VCLP18206 1134 aa17.49■□□□□ 0.39
FOXN3-204ENST00000553840 CD82P27701 267 aa17.49■□□□□ 0.39
FOXN3-204ENST00000553840 RBL1P28749 1068 aa17.49■□□□□ 0.39
FOXN3-204ENST00000553840 PTPN7P35236 360 aa17.49■□□□□ 0.39
FOXN3-204ENST00000553840 GEMP55040 296 aa17.49■□□□□ 0.39
FOXN3-204ENST00000553840 PRPSAP1Q14558 356 aa17.49■□□□□ 0.39
FOXN3-204ENST00000553840 SLC1A5Q15758 541 aa17.49■□□□□ 0.39
FOXN3-204ENST00000553840 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.49■□□□□ 0.39
FOXN3-204ENST00000553840 ZNF648Q5T619 568 aaPredicted RBP17.49■□□□□ 0.39
FOXN3-204ENST00000553840 GLT6D1Q7Z4J2 308 aa17.49■□□□□ 0.39
FOXN3-204ENST00000553840 ADGRG6Q86SQ4 1221 aa17.49■□□□□ 0.39
FOXN3-204ENST00000553840 AGBL5Q8NDL9 886 aa17.49■□□□□ 0.39
FOXN3-204ENST00000553840 RCBTB1Q8NDN9 531 aa17.49■□□□□ 0.39
FOXN3-204ENST00000553840 ACTL9Q8TC94 416 aa17.49■□□□□ 0.39
FOXN3-204ENST00000553840 DTX3LQ8TDB6 740 aa17.49■□□□□ 0.39
FOXN3-204ENST00000553840 BRSK1Q8TDC3 778 aa17.49■□□□□ 0.39
FOXN3-204ENST00000553840 BLOC1S5Q8TDH9 187 aa17.49■□□□□ 0.39
FOXN3-204ENST00000553840 SLC39A7Q92504 469 aa17.49■□□□□ 0.39
FOXN3-204ENST00000553840 LRRC45Q96CN5 670 aa17.49■□□□□ 0.39
FOXN3-204ENST00000553840 OXNAD1Q96HP4 312 aaPredicted RBP17.49■□□□□ 0.39
FOXN3-204ENST00000553840 ADGRG1Q9Y653 693 aa17.49■□□□□ 0.39
FOXN3-204ENST00000553840 BPTFQ12830 3046 aa17.49■□□□□ 0.39
FOXN3-204ENST00000553840 PRAMEF33A0A0G2JMD5 474 aa17.48■□□□□ 0.39
FOXN3-204ENST00000553840 F5H423 210 aaPredicted RBP17.48■□□□□ 0.39
FOXN3-204ENST00000553840 PJA2O43164 708 aa17.48■□□□□ 0.39
FOXN3-204ENST00000553840 PRAMEF10O60809 474 aa17.48■□□□□ 0.39
FOXN3-204ENST00000553840 PPFIA2O75334 1257 aa17.48■□□□□ 0.39
FOXN3-204ENST00000553840 EML2O95834 649 aa17.48■□□□□ 0.39
FOXN3-204ENST00000553840 SPAM1P38567 509 aa17.48■□□□□ 0.39
FOXN3-204ENST00000553840 EPHA4P54764 986 aa17.48■□□□□ 0.39
FOXN3-204ENST00000553840 OTUD4Q01804 1114 aaKnown RBP17.48■□□□□ 0.39
FOXN3-204ENST00000553840 NFATC2Q13469 925 aa17.48■□□□□ 0.39
FOXN3-204ENST00000553840 ITGA9Q13797 1035 aa17.48■□□□□ 0.39
FOXN3-204ENST00000553840 TAF1BQ53T94 588 aaPredicted RBP17.48■□□□□ 0.39
FOXN3-204ENST00000553840 CRTC3Q6UUV7 619 aa17.48■□□□□ 0.39
FOXN3-204ENST00000553840 RAD9BQ6WBX8 426 aa17.48■□□□□ 0.39
FOXN3-204ENST00000553840 GAS2L3Q86XJ1 694 aa17.48■□□□□ 0.39
FOXN3-204ENST00000553840 ZNF761Q86XN6 746 aaPredicted RBP17.48■□□□□ 0.39
FOXN3-204ENST00000553840 SYCE1Q8N0S2 351 aa17.48■□□□□ 0.39
FOXN3-204ENST00000553840 UBL4BQ8N7F7 174 aa17.48■□□□□ 0.39
FOXN3-204ENST00000553840 SNRNP27Q8WVK2 155 aaKnown RBP17.48■□□□□ 0.39
FOXN3-204ENST00000553840 PPP1R2P1Q96PQ5 205 aa17.48■□□□□ 0.39
FOXN3-204ENST00000553840 TIMM29Q9BSF4 260 aa17.48■□□□□ 0.39
FOXN3-204ENST00000553840 ZCCHC2Q9C0B9 1178 aaKnown RBP17.48■□□□□ 0.39
FOXN3-204ENST00000553840 GBA3Q9H227 469 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms