RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 OXNAD1Q96HP4 312 aaPredicted RBP5.02□□□□□ -1.61
VTI1B-202ENST00000553619 C9orf72Q96LT7 481 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 SLC6A18Q96N87 628 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 CYTH2Q99418 400 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 TTC1Q99614 292 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 RPP25Q9BUL9 199 aaKnown RBP5.02□□□□□ -1.61
VTI1B-202ENST00000553619 TMEM109Q9BVC6 243 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 KIFC1Q9BW19 673 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 CDADC1Q9BWV3 514 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 FUT8Q9BYC5 575 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 KRTAP9-3Q9BYQ3 159 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 KRTAP4-5Q9BYR2 181 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 TXLNGYQ9BZA5 131 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 TM6SF2Q9BZW4 377 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 NOD2Q9HC29 1040 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 MAGEE1Q9HCI5 957 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 DYRK4Q9NR20 520 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 SLC2A4RGQ9NR83 387 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 FETUBQ9UGM5 382 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 IL36AQ9UHA7 158 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 EVLQ9UI08 416 aaPredicted RBP5.02□□□□□ -1.61
VTI1B-202ENST00000553619 CDH22Q9UJ99 828 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 CHMP2BQ9UQN3 213 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 CHKBQ9Y259 395 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 PLAAQ9Y263 795 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 ZNF281Q9Y2X9 895 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 PPIL1Q9Y3C6 166 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 KIF26AQ9ULI4 1882 aaPredicted RBP5.02□□□□□ -1.61
VTI1B-202ENST00000553619 IQANK1A0A1B0GTG1 560 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 TLDC2A0PJX2 215 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 TTC34A8MYJ7 566 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 LOC730098B7Z3J9 87 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 PRRT4C9JH25 899 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 GOLGA8KD6RF30 607 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 K7ERQ8 282 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 ARNTLO00327 626 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 RASGRF2O14827 1237 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 MUSKO15146 869 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 TP73O15350 636 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 STX7O15400 261 aaKnown RBP5.01□□□□□ -1.61
VTI1B-202ENST00000553619 HTRA2O43464 458 aaPredicted RBP5.01□□□□□ -1.61
VTI1B-202ENST00000553619 ATG13O75143 517 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 AVILO75366 819 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 PGLSO95336 258 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 ACSL3O95573 720 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 EPHX1P07099 455 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 ZNF30P17039 623 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 TPH1P17752 444 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 LPOP22079 712 aaPredicted RBP5.01□□□□□ -1.61
VTI1B-202ENST00000553619 SP100P23497 879 aaPredicted RBP5.01□□□□□ -1.61
VTI1B-202ENST00000553619 NTSR1P30989 418 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 MSH2P43246 934 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 RGRP47804 291 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 STK19P49842 368 aaPredicted RBP5.01□□□□□ -1.61
VTI1B-202ENST00000553619 SERPINB9P50453 376 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 CCNHP51946 323 aaPredicted RBP5.01□□□□□ -1.61
VTI1B-202ENST00000553619 PRAMEP78395 509 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 CLCQ05315 142 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 KDSRQ06136 332 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 ELP6Q0PNE2 266 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 THOC5Q13769 683 aaKnown RBP5.01□□□□□ -1.61
VTI1B-202ENST00000553619 ARHGEF7Q14155 803 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 LRRC32Q14392 662 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 ELAVL3Q14576 367 aaKnown RBP5.01□□□□□ -1.61
VTI1B-202ENST00000553619 ZNF234Q14588 700 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 SSPNQ14714 243 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 UGP2Q16851 508 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 LONRF1Q17RB8 773 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 HNRNPA1L2Q32P51 320 aaKnown RBP5.01□□□□□ -1.61
VTI1B-202ENST00000553619 ANKRD20A4Q4UJ75 823 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 ZNF805Q5CZA5 627 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 TMEM196Q5HYL7 178 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 SIRPB2Q5JXA9 342 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 EOGTQ5NDL2 527 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 CERCAMQ5T4B2 595 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 ATXN7L2Q5T6C5 722 aaPredicted RBP5.01□□□□□ -1.61
VTI1B-202ENST00000553619 TSTD2Q5T7W7 516 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 STEAP4Q687X5 459 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 TMEM215Q68D42 235 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 PDPK2PQ6A1A2 396 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 DENND5AQ6IQ26 1287 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 ERAP2Q6P179 960 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 GALNT18Q6P9A2 607 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 ZNF852Q6ZMS4 543 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 DPY19L3Q6ZPD9 716 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 TPRG1Q6ZUI0 275 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 USP45Q70EL2 814 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 TAOK1Q7L7X3 1001 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 SDCCAG8Q86SQ7 713 aaPredicted RBP5.01□□□□□ -1.61
VTI1B-202ENST00000553619 TTC7BQ86TV6 843 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 TMEM135Q86UB9 458 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 CAMK1DQ8IU85 385 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 GSPT2Q8IYD1 628 aaKnown RBP5.01□□□□□ -1.61
VTI1B-202ENST00000553619 UBALD2Q8IYN6 164 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 CHPFQ8IZ52 775 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 ZNF513Q8N8E2 541 aaPredicted RBP5.01□□□□□ -1.61
VTI1B-202ENST00000553619 LPCAT1Q8NF37 534 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 OR2A12Q8NGT7 310 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 FRS2Q8WU20 508 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 ATXN2LQ8WWM7 1075 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms