RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 SNX18Q96RF0 628 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 ERGIC2Q96RQ1 377 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 THUMPD3Q9BV44 507 aaKnown RBP8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 FRMD8P1Q9BZ68 369 aaPredicted RBP8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 MS4A7Q9GZW8 240 aaPredicted RBP8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 LHPPQ9H008 270 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 PRO1933Q9H354 126 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 DDX31Q9H8H2 851 aaKnown RBP8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 TMEM9Q9P0T7 183 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 PLEKHA6Q9Y2H5 1048 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 KDM5DQ9BY66 1539 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 A0A075B6Q4 140 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 A0A096LPI6 279 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 DDX3YO15523 660 aaKnown RBP8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 RSL1D1O76021 490 aaKnown RBP8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 DHFRP00374 187 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 CKBP12277 381 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 CD36P16671 472 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 PBX1P40424 430 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 PREPP48147 710 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 TMBIM6P55061 237 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 CRADDP78560 199 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 MFSD5Q6N075 450 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 PPP1R18Q6NYC8 613 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 TMEM88Q6PEY1 159 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 C5orf46Q6UWT4 87 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 CLEC9AQ6UXN8 241 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 TMPRSS11AQ6ZMR5 421 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 ZBTB33Q86T24 672 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 FLAD1Q8NFF5 587 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 UNC93B1Q9H1C4 597 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 ARHGEF10O15013 1369 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 ZNF705GA8MUZ8 300 aaPredicted RBP8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 F7P08709 466 aaPredicted RBP8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 NAGAP17050 411 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 PTPN1P18031 435 aaKnown RBP8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 ITGA3P26006 1051 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 PPP5CP53041 499 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 PLK1P53350 603 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 MLLT10P55197 1068 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 ACY1Q03154 408 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 PRKCZQ05513 592 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 PPP1R8Q12972 351 aaKnown RBP8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 ELP2Q6IA86 826 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 TRMT11Q7Z4G4 463 aaKnown RBP8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 TMEM132CQ8N3T6 1108 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 DPP10Q8N608 796 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 NANSQ9NR45 359 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 ABCA10Q8WWZ4 1543 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 EI24O14681 340 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 HTRA2O43464 458 aaPredicted RBP8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 ORC5O43913 435 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 SCAF4O95104 1147 aaKnown RBP8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 TGM1P22735 817 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 HOXC13P31276 330 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 PSME3P61289 254 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 GLO1Q04760 184 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 SCARF1Q14162 830 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 USP10Q14694 798 aaKnown RBP8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 AKAP4Q5JQC9 854 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 ADAMTSL2Q86TH1 951 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 SLC34A3Q8N130 599 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 EPS8L1Q8TE68 723 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 SLC25A36Q96CQ1 311 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 ELP4Q96EB1 424 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 DSN1Q9H410 356 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 SERHLQ9NQF3 203 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 CRYL1Q9Y2S2 319 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 KAT6AQ92794 2004 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 MEIOCA2RUB1 952 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 ARHGAP33O14559 1287 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 PRPSAP2O60256 369 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 SLITRK5O94991 958 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 FARS2O95363 451 aaKnown RBP8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 BMP4P12644 408 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 SPNP16150 400 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 TXNL4AP83876 142 aaKnown RBP8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 STARD3Q14849 445 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 BCL7AQ4VC05 210 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 C16orf59Q7L2K0 433 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 ZSWIM9Q86XI8 627 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 EID3Q8N140 333 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 SPATA6LQ8N4H0 392 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 EMID1Q96A84 441 aaPredicted RBP8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 PPP4R1LQ9P1A2 415 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 CD300AQ9UGN4 299 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 TBC1D24Q9ULP9 559 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 AP3D1O14617 1153 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 RHOBTB3O94955 611 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 POMCP01189 267 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 HNRNPLP14866 589 aaKnown RBP eCLIP8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 TCF4P15884 667 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 FMO3P31513 532 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 ACLYP53396 1101 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 IDI1Q13907 227 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 ZNF404Q494X3 552 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 PRAMEF13Q5VWM6 474 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 CFAP206Q8IYR0 622 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 KLHL6Q8WZ60 621 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 ACDQ96AP0 544 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms