RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 AKT1P31749 480 aa22.55■■□□□ 1.2
TDP1-206ENST00000553569 MC4RP32245 332 aa22.55■■□□□ 1.2
TDP1-206ENST00000553569 RPIAP49247 311 aa22.55■■□□□ 1.2
TDP1-206ENST00000553569 NFATC2Q13469 925 aa22.55■■□□□ 1.2
TDP1-206ENST00000553569 GTF2H3Q13889 308 aa22.55■■□□□ 1.2
TDP1-206ENST00000553569 KCNJ11Q14654 390 aa22.55■■□□□ 1.2
TDP1-206ENST00000553569 LDLRAP1Q5SW96 308 aa22.55■■□□□ 1.2
TDP1-206ENST00000553569 EFL1Q7Z2Z2 1120 aaKnown RBP22.55■■□□□ 1.2
TDP1-206ENST00000553569 DDHD1Q8NEL9 900 aa22.55■■□□□ 1.2
TDP1-206ENST00000553569 IFI44Q8TCB0 444 aa22.55■■□□□ 1.2
TDP1-206ENST00000553569 FAM96AQ9H5X1 160 aa22.55■■□□□ 1.2
TDP1-206ENST00000553569 SPATS2LQ9NUQ6 558 aaKnown RBP22.55■■□□□ 1.2
TDP1-206ENST00000553569 SMOXQ9NWM0 555 aa22.55■■□□□ 1.2
TDP1-206ENST00000553569 KCNK6Q9Y257 313 aa22.55■■□□□ 1.2
TDP1-206ENST00000553569 SLC30A1Q9Y6M5 507 aa22.55■■□□□ 1.2
TDP1-206ENST00000553569 MROH6A6NGR9 719 aa22.54■■□□□ 1.2
TDP1-206ENST00000553569 VEGFDO43915 354 aa22.54■■□□□ 1.2
TDP1-206ENST00000553569 TMEM115Q12893 351 aaPredicted RBP22.54■■□□□ 1.2
TDP1-206ENST00000553569 LRP8Q14114 963 aa22.54■■□□□ 1.2
TDP1-206ENST00000553569 ZRANB3Q5FWF4 1079 aa22.54■■□□□ 1.2
TDP1-206ENST00000553569 ANKRD22Q5VYY1 191 aa22.54■■□□□ 1.2
TDP1-206ENST00000553569 RAB44Q7Z6P3 723 aaPredicted RBP22.54■■□□□ 1.2
TDP1-206ENST00000553569 TRAPPC5Q8IUR0 188 aa22.54■■□□□ 1.2
TDP1-206ENST00000553569 PPHLN1Q8NEY8 458 aaKnown RBP22.54■■□□□ 1.2
TDP1-206ENST00000553569 C16orf45Q96MC5 204 aaPredicted RBP22.54■■□□□ 1.2
TDP1-206ENST00000553569 TTC25Q96NG3 672 aa22.54■■□□□ 1.2
TDP1-206ENST00000553569 ZCCHC2Q9C0B9 1178 aaKnown RBP22.54■■□□□ 1.2
TDP1-206ENST00000553569 PADI4Q9UM07 663 aa22.54■■□□□ 1.2
TDP1-206ENST00000553569 TCAF1Q9Y4C2 921 aa22.54■■□□□ 1.2
TDP1-206ENST00000553569 GPR89AB7ZAQ6 455 aa22.53■■□□□ 1.2
TDP1-206ENST00000553569 GPR89BP0CG08 455 aa22.53■■□□□ 1.2
TDP1-206ENST00000553569 ADRA1DP25100 572 aa22.53■■□□□ 1.2
TDP1-206ENST00000553569 ARSDP51689 593 aa22.53■■□□□ 1.2
TDP1-206ENST00000553569 CLDN6P56747 220 aa22.53■■□□□ 1.2
TDP1-206ENST00000553569 CRADDP78560 199 aa22.53■■□□□ 1.2
TDP1-206ENST00000553569 CDK16Q00536 496 aa22.53■■□□□ 1.2
TDP1-206ENST00000553569 ZNF534Q76KX8 674 aa22.53■■□□□ 1.2
TDP1-206ENST00000553569 SNX20Q7Z614 316 aa22.53■■□□□ 1.2
TDP1-206ENST00000553569 LRRTM4Q86VH4 590 aa22.53■■□□□ 1.2
TDP1-206ENST00000553569 ZDHHC1Q8WTX9 485 aa22.53■■□□□ 1.2
TDP1-206ENST00000553569 CPT1BQ92523 772 aa22.53■■□□□ 1.2
TDP1-206ENST00000553569 CDKN2AIPNLQ96HQ2 116 aa22.53■■□□□ 1.2
TDP1-206ENST00000553569 RANBP9Q96S59 729 aa22.53■■□□□ 1.2
TDP1-206ENST00000553569 C19orf43Q9BQ61 176 aa22.53■■□□□ 1.2
TDP1-206ENST00000553569 SLC2A6Q9UGQ3 507 aa22.53■■□□□ 1.2
TDP1-206ENST00000553569 ASIC3Q9UHC3 531 aa22.53■■□□□ 1.2
TDP1-206ENST00000553569 CHUKO15111 745 aa22.52■■□□□ 1.2
TDP1-206ENST00000553569 NOBOXO60393 691 aa22.52■■□□□ 1.2
TDP1-206ENST00000553569 TMEM63AO94886 807 aa22.52■■□□□ 1.2
TDP1-206ENST00000553569 PRSS56P0CW18 603 aa22.52■■□□□ 1.2
TDP1-206ENST00000553569 MSH3P20585 1137 aa22.52■■□□□ 1.2
TDP1-206ENST00000553569 MGAT1P26572 445 aa22.52■■□□□ 1.2
TDP1-206ENST00000553569 MAZP56270 477 aaKnown RBP22.52■■□□□ 1.2
TDP1-206ENST00000553569 ILKQ13418 452 aa22.52■■□□□ 1.2
TDP1-206ENST00000553569 LAMB3Q13751 1172 aa22.52■■□□□ 1.2
TDP1-206ENST00000553569 INSCQ1MX18 579 aa22.52■■□□□ 1.2
TDP1-206ENST00000553569 SKIDA1Q1XH10 827 aa22.52■■□□□ 1.2
TDP1-206ENST00000553569 TSTD2Q5T7W7 516 aa22.52■■□□□ 1.2
TDP1-206ENST00000553569 DET1Q7L5Y6 550 aa22.52■■□□□ 1.2
TDP1-206ENST00000553569 RASGEF1AQ8N9B8 481 aa22.52■■□□□ 1.2
TDP1-206ENST00000553569 GPR156Q8NFN8 814 aa22.52■■□□□ 1.2
TDP1-206ENST00000553569 ULK4Q96C45 1275 aa22.52■■□□□ 1.2
TDP1-206ENST00000553569 TRIM44Q96DX7 344 aaPredicted RBP22.52■■□□□ 1.2
TDP1-206ENST00000553569 OSGEPL1Q9H4B0 414 aa22.52■■□□□ 1.2
TDP1-206ENST00000553569 BFARQ9NZS9 450 aa22.52■■□□□ 1.2
TDP1-206ENST00000553569 RNF14Q9UBS8 474 aa22.52■■□□□ 1.2
TDP1-206ENST00000553569 PCYOX1Q9UHG3 505 aa22.52■■□□□ 1.2
TDP1-206ENST00000553569 PTPRBP23467 1997 aa22.52■■□□□ 1.2
TDP1-206ENST00000553569 NCOR2Q9Y618 2525 aa22.51■■□□□ 1.19
TDP1-206ENST00000553569 EME2A4GXA9 379 aaPredicted RBP22.51■■□□□ 1.19
TDP1-206ENST00000553569 OR51F1A6NGY5 319 aa22.51■■□□□ 1.19
TDP1-206ENST00000553569 H7C0S8 307 aa22.51■■□□□ 1.19
TDP1-206ENST00000553569 AP3B1O00203 1094 aa22.51■■□□□ 1.19
TDP1-206ENST00000553569 KMOO15229 486 aa22.51■■□□□ 1.19
TDP1-206ENST00000553569 MAGEA6P43360 314 aa22.51■■□□□ 1.19
TDP1-206ENST00000553569 CDKN1CP49918 316 aaPredicted RBP22.51■■□□□ 1.19
TDP1-206ENST00000553569 SARNPP82979 210 aaKnown RBP22.51■■□□□ 1.19
TDP1-206ENST00000553569 FOXK2Q01167 660 aa22.51■■□□□ 1.19
TDP1-206ENST00000553569 PTK6Q13882 451 aa22.51■■□□□ 1.19
TDP1-206ENST00000553569 C14orf28Q4W4Y0 310 aa22.51■■□□□ 1.19
TDP1-206ENST00000553569 PERM1Q5SV97 790 aa22.51■■□□□ 1.19
TDP1-206ENST00000553569 LRRC8BQ6P9F7 803 aa22.51■■□□□ 1.19
TDP1-206ENST00000553569 TAS2R42Q7RTR8 314 aa22.51■■□□□ 1.19
TDP1-206ENST00000553569 ZNF547Q8IVP9 402 aa22.51■■□□□ 1.19
TDP1-206ENST00000553569 NXPE1Q8N323 547 aa22.51■■□□□ 1.19
TDP1-206ENST00000553569 OR13J1Q8NGT2 312 aa22.51■■□□□ 1.19
TDP1-206ENST00000553569 NAT14Q8WUY8 206 aa22.51■■□□□ 1.19
TDP1-206ENST00000553569 PATE1Q8WXA2 126 aa22.51■■□□□ 1.19
TDP1-206ENST00000553569 NAT6Q93015 286 aa22.51■■□□□ 1.19
TDP1-206ENST00000553569 ZNF778Q96MU6 729 aa22.51■■□□□ 1.19
TDP1-206ENST00000553569 SCNM1Q9BWG6 230 aa22.51■■□□□ 1.19
TDP1-206ENST00000553569 KLC4Q9NSK0 619 aa22.51■■□□□ 1.19
TDP1-206ENST00000553569 SYBUQ9NX95 663 aa22.51■■□□□ 1.19
TDP1-206ENST00000553569 KLK13Q9UKR3 277 aa22.51■■□□□ 1.19
TDP1-206ENST00000553569 DNAJC16Q9Y2G8 782 aa22.51■■□□□ 1.19
TDP1-206ENST00000553569 CCDC162PA2VCL2 907 aa22.5■■□□□ 1.19
TDP1-206ENST00000553569 OR2AG2A6NM03 316 aa22.5■■□□□ 1.19
TDP1-206ENST00000553569 GOLGA8MH3BSY2 632 aa22.5■■□□□ 1.19
TDP1-206ENST00000553569 CCDC188H7C350 402 aa22.5■■□□□ 1.19
TDP1-206ENST00000553569 SNX2O60749 519 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms