RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 KLC4Q9NSK0 619 aa18.01■□□□□ 0.47
SHMT2-206ENST00000553529 VPS18Q9P253 973 aa18.01■□□□□ 0.47
SHMT2-206ENST00000553529 ARL5AQ9Y689 179 aa18.01■□□□□ 0.47
SHMT2-206ENST00000553529 FAM208BQ5VWN6 2430 aa18■□□□□ 0.47
SHMT2-206ENST00000553529 C9orf172C9J069 976 aa18■□□□□ 0.47
SHMT2-206ENST00000553529 KCNN4O15554 427 aa18■□□□□ 0.47
SHMT2-206ENST00000553529 PNLIPP16233 465 aa18■□□□□ 0.47
SHMT2-206ENST00000553529 MAPK9P45984 424 aa18■□□□□ 0.47
SHMT2-206ENST00000553529 GDF10P55107 478 aa18■□□□□ 0.47
SHMT2-206ENST00000553529 SLC14A2Q15849 920 aa18■□□□□ 0.47
SHMT2-206ENST00000553529 CCDC181Q5TID7 509 aa18■□□□□ 0.47
SHMT2-206ENST00000553529 ZFAND4Q86XD8 727 aa18■□□□□ 0.47
SHMT2-206ENST00000553529 OR6C4Q8NGE1 309 aa18■□□□□ 0.47
SHMT2-206ENST00000553529 WDR48Q8TAF3 677 aa18■□□□□ 0.47
SHMT2-206ENST00000553529 JPH3Q8WXH2 748 aaPredicted RBP18■□□□□ 0.47
SHMT2-206ENST00000553529 USP7Q93009 1102 aa18■□□□□ 0.47
SHMT2-206ENST00000553529 TBC1D10AQ9BXI6 508 aa18■□□□□ 0.47
SHMT2-206ENST00000553529 GBA3Q9H227 469 aa18■□□□□ 0.47
SHMT2-206ENST00000553529 OSGEPL1Q9H4B0 414 aa18■□□□□ 0.47
SHMT2-206ENST00000553529 PIH1D1Q9NWS0 290 aaKnown RBP18■□□□□ 0.47
SHMT2-206ENST00000553529 KCNK4Q9NYG8 393 aa18■□□□□ 0.47
SHMT2-206ENST00000553529 CACNA1GO43497 2377 aa17.99■□□□□ 0.47
SHMT2-206ENST00000553529 A8MU76 341 aa17.99■□□□□ 0.47
SHMT2-206ENST00000553529 BTNL10A8MVZ5 291 aa17.99■□□□□ 0.47
SHMT2-206ENST00000553529 EFSO43281 561 aa17.99■□□□□ 0.47
SHMT2-206ENST00000553529 ITGA2BP08514 1039 aa17.99■□□□□ 0.47
SHMT2-206ENST00000553529 RBP3P10745 1247 aa17.99■□□□□ 0.47
SHMT2-206ENST00000553529 CTSCP53634 463 aa17.99■□□□□ 0.47
SHMT2-206ENST00000553529 DRG2P55039 364 aaKnown RBP17.99■□□□□ 0.47
SHMT2-206ENST00000553529 RWDD2BP57060 319 aa17.99■□□□□ 0.47
SHMT2-206ENST00000553529 DCDC1P59894 354 aa17.99■□□□□ 0.47
SHMT2-206ENST00000553529 BIRC2Q13490 618 aa17.99■□□□□ 0.47
SHMT2-206ENST00000553529 ANKRD20A2Q5SQ80 823 aa17.99■□□□□ 0.47
SHMT2-206ENST00000553529 SNAP47Q5SQN1 464 aa17.99■□□□□ 0.47
SHMT2-206ENST00000553529 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.99■□□□□ 0.47
SHMT2-206ENST00000553529 ANKRD20A1Q5TYW2 823 aa17.99■□□□□ 0.47
SHMT2-206ENST00000553529 ANKRD20A3Q5VUR7 823 aa17.99■□□□□ 0.47
SHMT2-206ENST00000553529 IGF2-ASQ6U949 168 aa17.99■□□□□ 0.47
SHMT2-206ENST00000553529 CLEC14AQ86T13 490 aa17.99■□□□□ 0.47
SHMT2-206ENST00000553529 PRUNE1Q86TP1 453 aa17.99■□□□□ 0.47
SHMT2-206ENST00000553529 LSMEM2Q8N112 164 aa17.99■□□□□ 0.47
SHMT2-206ENST00000553529 IL17CQ9P0M4 197 aa17.99■□□□□ 0.47
SHMT2-206ENST00000553529 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.99■□□□□ 0.47
SHMT2-206ENST00000553529 ZNF106Q9H2Y7 1883 aaKnown RBP17.99■□□□□ 0.47
SHMT2-206ENST00000553529 CPNE6O95741 557 aa17.98■□□□□ 0.47
SHMT2-206ENST00000553529 PYGLP06737 847 aa17.98■□□□□ 0.47
SHMT2-206ENST00000553529 JMJD7P0C870 316 aa17.98■□□□□ 0.47
SHMT2-206ENST00000553529 WT1P19544 449 aaPredicted RBP17.98■□□□□ 0.47
SHMT2-206ENST00000553529 RPL10P27635 214 aaKnown RBP17.98■□□□□ 0.47
SHMT2-206ENST00000553529 HHEXQ03014 270 aa17.98■□□□□ 0.47
SHMT2-206ENST00000553529 COL9A2Q14055 689 aaPredicted RBP17.98■□□□□ 0.47
SHMT2-206ENST00000553529 KIAA1614Q5VZ46 1190 aa17.98■□□□□ 0.47
SHMT2-206ENST00000553529 IYDQ6PHW0 289 aa17.98■□□□□ 0.47
SHMT2-206ENST00000553529 DARS2Q6PI48 645 aaKnown RBP17.98■□□□□ 0.47
SHMT2-206ENST00000553529 FAM83HQ6ZRV2 1179 aaPredicted RBP17.98■□□□□ 0.47
SHMT2-206ENST00000553529 BZW1Q7L1Q6 419 aaKnown RBP17.98■□□□□ 0.47
SHMT2-206ENST00000553529 GLT6D1Q7Z4J2 308 aa17.98■□□□□ 0.47
SHMT2-206ENST00000553529 C11orf96Q7Z7L8 435 aa17.98■□□□□ 0.47
SHMT2-206ENST00000553529 VASH2Q86V25 355 aa17.98■□□□□ 0.47
SHMT2-206ENST00000553529 PIM3Q86V86 326 aa17.98■□□□□ 0.47
SHMT2-206ENST00000553529 BEND7Q8N7W2 519 aaPredicted RBP17.98■□□□□ 0.47
SHMT2-206ENST00000553529 TMEM74Q96NL1 305 aa17.98■□□□□ 0.47
SHMT2-206ENST00000553529 ZSCAN5AQ9BUG6 496 aa17.98■□□□□ 0.47
SHMT2-206ENST00000553529 STRADBQ9C0K7 418 aa17.98■□□□□ 0.47
SHMT2-206ENST00000553529 CARD9Q9H257 536 aa17.98■□□□□ 0.47
SHMT2-206ENST00000553529 TRIM39Q9HCM9 518 aa17.98■□□□□ 0.47
SHMT2-206ENST00000553529 OCIAD1Q9NX40 245 aa17.98■□□□□ 0.47
SHMT2-206ENST00000553529 KLHL3Q9UH77 587 aa17.98■□□□□ 0.47
SHMT2-206ENST00000553529 WDR37Q9Y2I8 494 aa17.98■□□□□ 0.47
SHMT2-206ENST00000553529 PTPRQQ9UMZ3 2332 aa17.98■□□□□ 0.47
SHMT2-206ENST00000553529 SMG1Q96Q15 3661 aaKnown RBP17.97■□□□□ 0.47
SHMT2-206ENST00000553529 RGSL1A5PLK6 1076 aa17.97■□□□□ 0.47
SHMT2-206ENST00000553529 OR52A4PA6NMU1 304 aa17.97■□□□□ 0.47
SHMT2-206ENST00000553529 HACD1B0YJ81 288 aa17.97■□□□□ 0.47
SHMT2-206ENST00000553529 CHUKO15111 745 aa17.97■□□□□ 0.47
SHMT2-206ENST00000553529 PRSS56P0CW18 603 aa17.97■□□□□ 0.47
SHMT2-206ENST00000553529 FGF3P11487 239 aaPredicted RBP17.97■□□□□ 0.47
SHMT2-206ENST00000553529 BRAFP15056 766 aa17.97■□□□□ 0.47
SHMT2-206ENST00000553529 ADRA1AP35348 466 aa17.97■□□□□ 0.47
SHMT2-206ENST00000553529 TMPRSS15P98073 1019 aa17.97■□□□□ 0.47
SHMT2-206ENST00000553529 MPP3Q13368 585 aa17.97■□□□□ 0.47
SHMT2-206ENST00000553529 MSLNQ13421 630 aaPredicted RBP17.97■□□□□ 0.47
SHMT2-206ENST00000553529 XRCC4Q13426 336 aa17.97■□□□□ 0.47
SHMT2-206ENST00000553529 LRP8Q14114 963 aa17.97■□□□□ 0.47
SHMT2-206ENST00000553529 INSCQ1MX18 579 aa17.97■□□□□ 0.47
SHMT2-206ENST00000553529 DET1Q7L5Y6 550 aa17.97■□□□□ 0.47
SHMT2-206ENST00000553529 PEX26Q7Z412 305 aa17.97■□□□□ 0.47
SHMT2-206ENST00000553529 RASGEF1AQ8N9B8 481 aa17.97■□□□□ 0.47
SHMT2-206ENST00000553529 OR13C4Q8NGS5 318 aa17.97■□□□□ 0.47
SHMT2-206ENST00000553529 ATG4AQ8WYN0 398 aa17.97■□□□□ 0.47
SHMT2-206ENST00000553529 PLEKHG4BQ96PX9 1271 aa17.97■□□□□ 0.47
SHMT2-206ENST00000553529 SLC38A3Q99624 504 aa17.97■□□□□ 0.47
SHMT2-206ENST00000553529 ANP32EQ9BTT0 268 aa17.97■□□□□ 0.47
SHMT2-206ENST00000553529 FAM96AQ9H5X1 160 aa17.97■□□□□ 0.47
SHMT2-206ENST00000553529 LUC7LQ9NQ29 371 aaKnown RBP17.97■□□□□ 0.47
SHMT2-206ENST00000553529 ZNF624Q9P2J8 865 aaPredicted RBP17.97■□□□□ 0.47
SHMT2-206ENST00000553529 NFKBIL1Q9UBC1 381 aaPredicted RBP17.97■□□□□ 0.47
SHMT2-206ENST00000553529 CCDC66A2RUB6 948 aa17.96■□□□□ 0.47
SHMT2-206ENST00000553529 PRR19A6NJB7 356 aa17.96■□□□□ 0.47
SHMT2-206ENST00000553529 OR2AG2A6NM03 316 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms