RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 LRRC8BQ6P9F7 803 aa11.58□□□□□ -0.56
TRAFD1-209ENST00000552896 SYDE1Q6ZW31 735 aaPredicted RBP11.58□□□□□ -0.56
TRAFD1-209ENST00000552896 SNX20Q7Z614 316 aa11.58□□□□□ -0.56
TRAFD1-209ENST00000552896 TAF8Q7Z7C8 310 aa11.58□□□□□ -0.56
TRAFD1-209ENST00000552896 NRROSQ86YC3 692 aa11.58□□□□□ -0.56
TRAFD1-209ENST00000552896 SLC35F3Q8IY50 421 aa11.58□□□□□ -0.56
TRAFD1-209ENST00000552896 KYQ8NBH2 561 aa11.58□□□□□ -0.56
TRAFD1-209ENST00000552896 PPHLN1Q8NEY8 458 aaKnown RBP11.58□□□□□ -0.56
TRAFD1-209ENST00000552896 CCL4L1Q8NHW4 92 aa11.58□□□□□ -0.56
TRAFD1-209ENST00000552896 GDAP1Q8TB36 358 aa11.58□□□□□ -0.56
TRAFD1-209ENST00000552896 ZNF398Q8TD17 642 aa11.58□□□□□ -0.56
TRAFD1-209ENST00000552896 CPT1BQ92523 772 aa11.58□□□□□ -0.56
TRAFD1-209ENST00000552896 IL22Q9GZX6 179 aa11.58□□□□□ -0.56
TRAFD1-209ENST00000552896 SUDS3Q9H7L9 328 aaPredicted RBP11.58□□□□□ -0.56
TRAFD1-209ENST00000552896 ARFGAP3Q9NP61 516 aa11.58□□□□□ -0.56
TRAFD1-209ENST00000552896 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.58□□□□□ -0.56
TRAFD1-209ENST00000552896 GPR34Q9UPC5 381 aa11.58□□□□□ -0.56
TRAFD1-209ENST00000552896 GPSM3Q9Y4H4 160 aa11.58□□□□□ -0.56
TRAFD1-209ENST00000552896 AKAP13Q12802 2813 aa11.58□□□□□ -0.56
TRAFD1-209ENST00000552896 TRBV5-4A0A0C4DH59 114 aa11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 TCRBV7S3A2A0A539 114 aa11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 MED19A0JLT2 244 aaPredicted RBP11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 B4DGG1 531 aa11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 CCL22O00626 93 aa11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 KMOO15229 486 aa11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 GRID2O43424 1007 aa11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 MTX2O75431 263 aa11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 MLNP12872 115 aa11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 PMLP29590 882 aa11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 AKT1P31749 480 aa11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 MC4RP32245 332 aa11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 ACTR1BP42025 376 aa11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 ACTR1AP61163 376 aa11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 DR1Q01658 176 aa11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 GTF2H3Q13889 308 aa11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 DHX34Q14147 1143 aaKnown RBP11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 CCDC38Q502W7 563 aa11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 ZNF648Q5T619 568 aaPredicted RBP11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 TSTD2Q5T7W7 516 aa11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 ANKRD22Q5VYY1 191 aa11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 AFTPHQ6ULP2 937 aa11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 RAB44Q7Z6P3 723 aaPredicted RBP11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 SLCO6A1Q86UG4 719 aa11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 LRRTM4Q86VH4 590 aa11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 PPIL6Q8IXY8 311 aa11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 NXPE1Q8N323 547 aa11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 MCUQ8NE86 351 aa11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 OR13J1Q8NGT2 312 aa11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 ADAMTS14Q8WXS8 1223 aa11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 NAT6Q93015 286 aa11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 TIMM29Q9BSF4 260 aa11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 ASB8Q9H765 288 aa11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 MRM3Q9HC36 420 aaKnown RBP11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 XAB2Q9HCS7 855 aaKnown RBP11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 BFARQ9NZS9 450 aa11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 TAAR2Q9P1P5 351 aa11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 SIRPGQ9P1W8 387 aa11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 ASIC3Q9UHC3 531 aa11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 ZNHIT2Q9UHR6 403 aa11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 CRLS1Q9UJA2 301 aa11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 PCYT1BQ9Y5K3 369 aaPredicted RBP11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 ST14Q9Y5Y6 855 aa11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 SLC30A1Q9Y6M5 507 aa11.57□□□□□ -0.56
TRAFD1-209ENST00000552896 IGLV3-16A0A075B6K0 115 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 EME2A4GXA9 379 aaPredicted RBP11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 KIF2AO00139 706 aaPredicted RBP11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 NOBOXO60393 691 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 UGT1A9O60656 530 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 CDK14O94921 469 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 TUBB4AP04350 444 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 ACP5P13686 325 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 UGT1A6P19224 532 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 UGT1A1P22309 533 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 UGT1A4P22310 534 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 AK4P27144 223 aaPredicted RBP11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 UGT1A3P35503 534 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 UGT1A5P35504 534 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 PTGIRP43119 386 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 MAGEA3P43357 314 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 NPY2RP49146 381 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 ARSDP51689 593 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 CLCNKAP51800 687 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 SESN2P58004 480 aaPredicted RBP11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 TMPRSS15P98073 1019 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 CACNG1Q06432 222 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 TMEM115Q12893 351 aaPredicted RBP11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 KCTD19Q17RG1 926 aaPredicted RBP11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 PCID2Q5JVF3 399 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 RNASEH2BQ5TBB1 312 aaKnown RBP11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 GUSBP11Q6P575 273 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 OGFOD3Q6PK18 319 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 SLC30A9Q6PML9 568 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 CRTC3Q6UUV7 619 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 CHST15Q7LFX5 561 aaPredicted RBP11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 ZNF572Q7Z3I7 529 aaPredicted RBP11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 HOOK3Q86VS8 718 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 JAMLQ86YT9 394 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 TRAPPC5Q8IUR0 188 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 ZNF547Q8IVP9 402 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 KLHL7Q8IXQ5 586 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms