RNA–Protein interactions for RNA: ENST00000552491.5

LIMA1-212, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 2,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-212ENST00000552491 GALNT18Q6P9A2 607 aa5.39□□□□□ -1.55
LIMA1-212ENST00000552491 TFAP2DQ7Z6R9 452 aa5.39□□□□□ -1.55
LIMA1-212ENST00000552491 ZNF598Q86UK7 904 aaKnown RBP5.39□□□□□ -1.55
LIMA1-212ENST00000552491 RALGPS2Q86X27 583 aaPredicted RBP5.39□□□□□ -1.55
LIMA1-212ENST00000552491 PGBD5Q8N414 524 aa5.39□□□□□ -1.55
LIMA1-212ENST00000552491 DCBLD1Q8N8Z6 715 aa5.39□□□□□ -1.55
LIMA1-212ENST00000552491 DDHD1Q8NEL9 900 aa5.39□□□□□ -1.55
LIMA1-212ENST00000552491 BPIFB6Q8NFQ5 453 aa5.39□□□□□ -1.55
LIMA1-212ENST00000552491 OR2T11Q8NH01 316 aa5.39□□□□□ -1.55
LIMA1-212ENST00000552491 SLC22A17Q8WUG5 538 aa5.39□□□□□ -1.55
LIMA1-212ENST00000552491 ESAMQ96AP7 390 aa5.39□□□□□ -1.55
LIMA1-212ENST00000552491 ERLEC1Q96DZ1 483 aa5.39□□□□□ -1.55
LIMA1-212ENST00000552491 SMARCD1Q96GM5 515 aa5.39□□□□□ -1.55
LIMA1-212ENST00000552491 ASB2Q96Q27 587 aa5.39□□□□□ -1.55
LIMA1-212ENST00000552491 ACOX2Q99424 681 aa5.39□□□□□ -1.55
LIMA1-212ENST00000552491 TUBA1CQ9BQE3 449 aa5.39□□□□□ -1.55
LIMA1-212ENST00000552491 C1orf50Q9BV19 199 aa5.39□□□□□ -1.55
LIMA1-212ENST00000552491 CHID1Q9BWS9 393 aa5.39□□□□□ -1.55
LIMA1-212ENST00000552491 LHPPQ9H008 270 aa5.39□□□□□ -1.55
LIMA1-212ENST00000552491 MFSD1Q9H3U5 465 aa5.39□□□□□ -1.55
LIMA1-212ENST00000552491 CARS2Q9HA77 564 aaKnown RBP5.39□□□□□ -1.55
LIMA1-212ENST00000552491 FANCEQ9HB96 536 aa5.39□□□□□ -1.55
LIMA1-212ENST00000552491 SEMA4BQ9NPR2 832 aaPredicted RBP5.39□□□□□ -1.55
LIMA1-212ENST00000552491 GID8Q9NWU2 228 aa5.39□□□□□ -1.55
LIMA1-212ENST00000552491 TMEM9Q9P0T7 183 aa5.39□□□□□ -1.55
LIMA1-212ENST00000552491 ANAPC2Q9UJX6 822 aa5.39□□□□□ -1.55
LIMA1-212ENST00000552491 ASB1Q9Y576 335 aa5.39□□□□□ -1.55
LIMA1-212ENST00000552491 PCDHGA11Q9Y5H2 935 aa5.39□□□□□ -1.55
LIMA1-212ENST00000552491 HS3ST4Q9Y661 456 aa5.39□□□□□ -1.55
LIMA1-212ENST00000552491 ARL5AQ9Y689 179 aa5.39□□□□□ -1.55
LIMA1-212ENST00000552491 PTCH2Q9Y6C5 1203 aa5.39□□□□□ -1.55
LIMA1-212ENST00000552491 NLRC5Q86WI3 1866 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 SOBPA7XYQ1 873 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 ENPP3O14638 875 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 SLC7A4O43246 635 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 SYNCRIPO60506 623 aaKnown RBP5.38□□□□□ -1.55
LIMA1-212ENST00000552491 SEC14L2O76054 403 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 DDNO94850 711 aaPredicted RBP5.38□□□□□ -1.55
LIMA1-212ENST00000552491 GOT2P00505 430 aaKnown RBP5.38□□□□□ -1.55
LIMA1-212ENST00000552491 F2P00734 622 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 HTR1AP08908 422 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 OCM2P0CE71 109 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 OCMP0CE72 109 aaPredicted RBP5.38□□□□□ -1.55
LIMA1-212ENST00000552491 PRR35P0CG20 571 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 PCNAP12004 261 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 EEF1DP29692 281 aaKnown RBP5.38□□□□□ -1.55
LIMA1-212ENST00000552491 CYP2C18P33260 490 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 CASP2P42575 452 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 IREB2P48200 963 aaKnown RBP5.38□□□□□ -1.55
LIMA1-212ENST00000552491 LHX1P48742 406 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 AGTR2P50052 363 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 BCAP31P51572 246 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 PHEXP78562 749 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 CLCQ05315 142 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 FOXM1Q08050 763 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 ITKQ08881 620 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 CAMK2BQ13554 666 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 MOGQ16653 247 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 CYP2A13Q16696 494 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 TIGD2Q4W5G0 525 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 COQ5Q5HYK3 327 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 PIK3R6Q5UE93 754 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 GTF2IRD2BQ6EKJ0 949 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 LAIR2Q6ISS4 152 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 SLC2A7Q6PXP3 512 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 NUDT18Q6ZVK8 323 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 GALNT7Q86SF2 657 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 SCD5Q86SK9 330 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 GTF2IRD2Q86UP8 949 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 RIMKLAQ8IXN7 391 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 HS3ST5Q8IZT8 346 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 FAM86B1Q8N7N1 296 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 RTL3Q8N8U3 475 aaKnown RBP5.38□□□□□ -1.55
LIMA1-212ENST00000552491 OR13C4Q8NGS5 318 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 OR10T2Q8NGX3 314 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 PNPT1Q8TCS8 783 aaKnown RBP5.38□□□□□ -1.55
LIMA1-212ENST00000552491 BPIFB1Q8TDL5 484 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 HASPINQ8TF76 798 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 CHPT1Q8WUD6 406 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 ISG20Q96AZ6 181 aaKnown RBP5.38□□□□□ -1.55
LIMA1-212ENST00000552491 CDCA5Q96FF9 252 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 HMCESQ96FZ2 354 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 GLT1D1Q96MS3 346 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 RNF145Q96MT1 663 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 CYP2S1Q96SQ9 504 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 KCTD14Q9BQ13 255 aaPredicted RBP5.38□□□□□ -1.55
LIMA1-212ENST00000552491 TRIM54Q9BYV2 358 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 MUC13Q9H3R2 512 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 NMUR1Q9HB89 426 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 RIC8BQ9NVN3 520 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 INTS10Q9NVR2 710 aaKnown RBP5.38□□□□□ -1.55
LIMA1-212ENST00000552491 GALPQ9UBC7 116 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 UTS2RQ9UKP6 389 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 CDH9Q9ULB4 789 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 SLC27A5Q9Y2P5 690 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 NEUROG3Q9Y4Z2 214 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 GBF1Q92538 1859 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 CCDC162PA2VCL2 907 aa5.38□□□□□ -1.55
LIMA1-212ENST00000552491 NCF1BA6NI72 391 aaPredicted RBP5.38□□□□□ -1.55
LIMA1-212ENST00000552491 NCF1CA8MVU1 366 aaPredicted RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms