RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 SP7Q8TDD2 431 aaPredicted RBP13.89□□□□□ -0.19
RAB3IP-216ENST00000552199 ZNF483Q8TF39 744 aaPredicted RBP13.89□□□□□ -0.19
RAB3IP-216ENST00000552199 TWIST2Q8WVJ9 160 aa13.89□□□□□ -0.19
RAB3IP-216ENST00000552199 DNAJC9Q8WXX5 260 aa13.89□□□□□ -0.19
RAB3IP-216ENST00000552199 VOPP1Q96AW1 172 aa13.89□□□□□ -0.19
RAB3IP-216ENST00000552199 TTC1Q99614 292 aa13.89□□□□□ -0.19
RAB3IP-216ENST00000552199 RAD9AQ99638 391 aa13.89□□□□□ -0.19
RAB3IP-216ENST00000552199 NPAS2Q99743 824 aa13.89□□□□□ -0.19
RAB3IP-216ENST00000552199 CLPBQ9H078 707 aa13.89□□□□□ -0.19
RAB3IP-216ENST00000552199 ASB8Q9H765 288 aa13.89□□□□□ -0.19
RAB3IP-216ENST00000552199 AKTIPQ9H8T0 292 aa13.89□□□□□ -0.19
RAB3IP-216ENST00000552199 WDR41Q9HAD4 459 aa13.89□□□□□ -0.19
RAB3IP-216ENST00000552199 PPM1HQ9ULR3 514 aa13.89□□□□□ -0.19
RAB3IP-216ENST00000552199 HS3ST2Q9Y278 367 aa13.89□□□□□ -0.19
RAB3IP-216ENST00000552199 KIAA0100Q14667 2235 aaKnown RBP13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 TRBV5-4A0A0C4DH59 114 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 ATP6AP2A0A1C7CYW4 349 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 GRM6O15303 877 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 ATP6AP2O75787 350 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 ITGALP20701 1170 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 ATP6V1C1P21283 382 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 AGTR2P50052 363 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 STX5Q13190 355 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 NFATC2Q13469 925 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 TEAD2Q15562 447 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 GEN1Q17RS7 908 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 MUM1Q2TAK8 710 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 FUT11Q495W5 492 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 LYPLAL1Q5VWZ2 237 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 PTRHD1Q6GMV3 140 aaKnown RBP13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 ASTLQ6HA08 431 aaPredicted RBP13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 C22orf39Q6P5X5 142 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 ADGRG6Q86SQ4 1221 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 RBFAQ8N0V3 343 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 CBARPQ8N350 705 aaPredicted RBP13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 PPFIBP2Q8ND30 876 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 CCDC97Q96F63 343 aaPredicted RBP13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 TUBGCP5Q96RT8 1024 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 LYSMD1Q96S90 227 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 MRPL1Q9BYD6 325 aaKnown RBP13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 SEMA4BQ9NPR2 832 aaPredicted RBP13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 UTP6Q9NYH9 597 aaKnown RBP13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 HECAQ9UBI9 543 aaPredicted RBP13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 NCF1BA6NI72 391 aaPredicted RBP13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 NCF1CA8MVU1 366 aaPredicted RBP13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 PIP5K1BO14986 540 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 CFLARO15519 480 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 RFPL2O75678 378 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 BAG2O95816 211 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 NCF1P14598 390 aaPredicted RBP13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 ACADSP16219 412 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 CTNNB1P35222 781 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 ZNF423Q2M1K9 1284 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 ARHGAP15Q53QZ3 475 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 FBXO48Q5FWF7 155 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 PIGGQ5H8A4 983 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 GRAMD4Q6IC98 578 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 RTL10Q7L3V2 364 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 SLC26A7Q8TE54 656 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 POF1BQ8WVV4 589 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 PYDC1Q8WXC3 89 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 KCNA7Q96RP8 456 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 BOCQ9BWV1 1114 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 TUBB1Q9H4B7 451 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 SUV39H2Q9H5I1 410 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 FBRSL1Q9HCM7 1045 aaKnown RBP13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 CD274Q9NZQ7 290 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 GNPTGQ9UJJ9 305 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 PCTPQ9UKL6 214 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 PACSIN3Q9UKS6 424 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 PPIL1Q9Y3C6 166 aa13.88□□□□□ -0.19
RAB3IP-216ENST00000552199 GLYATL1P3A0A0U1RQE8 302 aa13.87□□□□□ -0.19
RAB3IP-216ENST00000552199 A0A1B0GTL3 188 aa13.87□□□□□ -0.19
RAB3IP-216ENST00000552199 SNX2O60749 519 aa13.87□□□□□ -0.19
RAB3IP-216ENST00000552199 MLYCDO95822 493 aa13.87□□□□□ -0.19
RAB3IP-216ENST00000552199 UGT1A6P19224 532 aa13.87□□□□□ -0.19
RAB3IP-216ENST00000552199 UGT1A1P22309 533 aa13.87□□□□□ -0.19
RAB3IP-216ENST00000552199 UGT1A4P22310 534 aa13.87□□□□□ -0.19
RAB3IP-216ENST00000552199 ACRV1P26436 265 aa13.87□□□□□ -0.19
RAB3IP-216ENST00000552199 UGT1A3P35503 534 aa13.87□□□□□ -0.19
RAB3IP-216ENST00000552199 UGT1A5P35504 534 aa13.87□□□□□ -0.19
RAB3IP-216ENST00000552199 SPAM1P38567 509 aa13.87□□□□□ -0.19
RAB3IP-216ENST00000552199 DPP6P42658 865 aa13.87□□□□□ -0.19
RAB3IP-216ENST00000552199 PTPN5P54829 565 aa13.87□□□□□ -0.19
RAB3IP-216ENST00000552199 FPGSQ05932 587 aa13.87□□□□□ -0.19
RAB3IP-216ENST00000552199 CHRNA6Q15825 494 aa13.87□□□□□ -0.19
RAB3IP-216ENST00000552199 TMEM240Q5SV17 173 aa13.87□□□□□ -0.19
RAB3IP-216ENST00000552199 CRTC1Q6UUV9 634 aa13.87□□□□□ -0.19
RAB3IP-216ENST00000552199 TSPAN33Q86UF1 283 aa13.87□□□□□ -0.19
RAB3IP-216ENST00000552199 DDIASQ8IXT1 998 aa13.87□□□□□ -0.19
RAB3IP-216ENST00000552199 SPPL3Q8TCT6 385 aa13.87□□□□□ -0.19
RAB3IP-216ENST00000552199 BADQ92934 168 aa13.87□□□□□ -0.19
RAB3IP-216ENST00000552199 ECHDC3Q96DC8 303 aa13.87□□□□□ -0.19
RAB3IP-216ENST00000552199 SCRN2Q96FV2 425 aa13.87□□□□□ -0.19
RAB3IP-216ENST00000552199 CPEB1Q9BZB8 566 aaKnown RBP13.87□□□□□ -0.19
RAB3IP-216ENST00000552199 CIPCQ9C0C6 399 aa13.87□□□□□ -0.19
RAB3IP-216ENST00000552199 CEP44Q9C0F1 390 aa13.87□□□□□ -0.19
RAB3IP-216ENST00000552199 TDP1Q9NUW8 608 aa13.87□□□□□ -0.19
RAB3IP-216ENST00000552199 CCDC167Q9P0B6 97 aa13.87□□□□□ -0.19
RAB3IP-216ENST00000552199 SLC25A13Q9UJS0 675 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms