RNA–Protein interactions for RNA: ENST00000551787.5

BRF1-219, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-219ENST00000551787 PRUNE1Q86TP1 453 aa16.52■□□□□ 0.24
BRF1-219ENST00000551787 PHYKPLQ8IUZ5 450 aa16.52■□□□□ 0.24
BRF1-219ENST00000551787 OR4K2Q8NGD2 314 aa16.52■□□□□ 0.24
BRF1-219ENST00000551787 WDR48Q8TAF3 677 aa16.52■□□□□ 0.24
BRF1-219ENST00000551787 SLC37A2Q8TED4 501 aa16.52■□□□□ 0.24
BRF1-219ENST00000551787 HNRNPLLQ8WVV9 542 aaKnown RBP16.52■□□□□ 0.24
BRF1-219ENST00000551787 ALS2CR12Q96Q35 445 aa16.52■□□□□ 0.24
BRF1-219ENST00000551787 POLR1BQ9H9Y6 1135 aa16.52■□□□□ 0.24
BRF1-219ENST00000551787 PRDM8Q9NQV8 689 aa16.52■□□□□ 0.24
BRF1-219ENST00000551787 KLC4Q9NSK0 619 aa16.52■□□□□ 0.24
BRF1-219ENST00000551787 DNAJC16Q9Y2G8 782 aa16.52■□□□□ 0.24
BRF1-219ENST00000551787 GLYATL1P3A0A0U1RQE8 302 aa16.51■□□□□ 0.23
BRF1-219ENST00000551787 GOLGA6L3A6NEY3 463 aa16.51■□□□□ 0.23
BRF1-219ENST00000551787 C2orf81A6NN90 581 aa16.51■□□□□ 0.23
BRF1-219ENST00000551787 CCL22O00626 93 aa16.51■□□□□ 0.23
BRF1-219ENST00000551787 LIASO43766 372 aa16.51■□□□□ 0.23
BRF1-219ENST00000551787 ETS1P14921 441 aa16.51■□□□□ 0.23
BRF1-219ENST00000551787 PNLIPP16233 465 aa16.51■□□□□ 0.23
BRF1-219ENST00000551787 LPOP22079 712 aaPredicted RBP16.51■□□□□ 0.23
BRF1-219ENST00000551787 LSSP48449 732 aa16.51■□□□□ 0.23
BRF1-219ENST00000551787 TMEM115Q12893 351 aaPredicted RBP16.51■□□□□ 0.23
BRF1-219ENST00000551787 MSLNQ13421 630 aaPredicted RBP16.51■□□□□ 0.23
BRF1-219ENST00000551787 PEX6Q13608 980 aa16.51■□□□□ 0.23
BRF1-219ENST00000551787 TAF1AQ15573 450 aaPredicted RBP16.51■□□□□ 0.23
BRF1-219ENST00000551787 ZNF662Q6ZS27 426 aa16.51■□□□□ 0.23
BRF1-219ENST00000551787 MICALCLQ6ZW33 695 aa16.51■□□□□ 0.23
BRF1-219ENST00000551787 TMPRSS9Q7Z410 1059 aa16.51■□□□□ 0.23
BRF1-219ENST00000551787 ZNF547Q8IVP9 402 aa16.51■□□□□ 0.23
BRF1-219ENST00000551787 OSGEPL1Q9H4B0 414 aa16.51■□□□□ 0.23
BRF1-219ENST00000551787 EPB41L5Q9HCM4 733 aa16.51■□□□□ 0.23
BRF1-219ENST00000551787 ZNF148Q9UQR1 794 aa16.51■□□□□ 0.23
BRF1-219ENST00000551787 ZFHX4Q86UP3 3567 aa16.51■□□□□ 0.23
BRF1-219ENST00000551787 GAPDHSO14556 408 aaPredicted RBP16.5■□□□□ 0.23
BRF1-219ENST00000551787 CHUKO15111 745 aa16.5■□□□□ 0.23
BRF1-219ENST00000551787 NRDCO43847 1150 aa16.5■□□□□ 0.23
BRF1-219ENST00000551787 IFNB1P01574 187 aa16.5■□□□□ 0.23
BRF1-219ENST00000551787 CD1CP29017 333 aa16.5■□□□□ 0.23
BRF1-219ENST00000551787 PPM1FP49593 454 aaPredicted RBP16.5■□□□□ 0.23
BRF1-219ENST00000551787 NFATC2Q13469 925 aa16.5■□□□□ 0.23
BRF1-219ENST00000551787 OASLQ15646 514 aaKnown RBP16.5■□□□□ 0.23
BRF1-219ENST00000551787 KCTD19Q17RG1 926 aaPredicted RBP16.5■□□□□ 0.23
BRF1-219ENST00000551787 ZDHHC20Q5W0Z9 365 aa16.5■□□□□ 0.23
BRF1-219ENST00000551787 IYDQ6PHW0 289 aa16.5■□□□□ 0.23
BRF1-219ENST00000551787 ZNF438Q7Z4V0 828 aa16.5■□□□□ 0.23
BRF1-219ENST00000551787 TRAPPC5Q8IUR0 188 aa16.5■□□□□ 0.23
BRF1-219ENST00000551787 ZNF398Q8TD17 642 aa16.5■□□□□ 0.23
BRF1-219ENST00000551787 BRSK1Q8TDC3 778 aa16.5■□□□□ 0.23
BRF1-219ENST00000551787 NAT14Q8WUY8 206 aa16.5■□□□□ 0.23
BRF1-219ENST00000551787 NAF1Q96HR8 494 aaKnown RBP16.5■□□□□ 0.23
BRF1-219ENST00000551787 VPS35Q96QK1 796 aa16.5■□□□□ 0.23
BRF1-219ENST00000551787 TLR10Q9BXR5 811 aa16.5■□□□□ 0.23
BRF1-219ENST00000551787 FAM96AQ9H5X1 160 aa16.5■□□□□ 0.23
BRF1-219ENST00000551787 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.5■□□□□ 0.23
BRF1-219ENST00000551787 FKBPLQ9UIM3 349 aa16.5■□□□□ 0.23
BRF1-219ENST00000551787 KIF26BQ2KJY2 2108 aa16.49■□□□□ 0.23
BRF1-219ENST00000551787 VEGFDO43915 354 aa16.49■□□□□ 0.23
BRF1-219ENST00000551787 ZNF189O75820 626 aaPredicted RBP16.49■□□□□ 0.23
BRF1-219ENST00000551787 TNFSF15O95150 251 aa16.49■□□□□ 0.23
BRF1-219ENST00000551787 PRAMEF1O95521 474 aa16.49■□□□□ 0.23
BRF1-219ENST00000551787 HGFP14210 728 aa16.49■□□□□ 0.23
BRF1-219ENST00000551787 ZNF7P17097 686 aaPredicted RBP16.49■□□□□ 0.23
BRF1-219ENST00000551787 MPSTP25325 297 aa16.49■□□□□ 0.23
BRF1-219ENST00000551787 CXCR5P32302 372 aa16.49■□□□□ 0.23
BRF1-219ENST00000551787 ACTN2P35609 894 aa16.49■□□□□ 0.23
BRF1-219ENST00000551787 INHBCP55103 352 aa16.49■□□□□ 0.23
BRF1-219ENST00000551787 SEPT7Q16181 437 aaKnown RBP16.49■□□□□ 0.23
BRF1-219ENST00000551787 INSCQ1MX18 579 aa16.49■□□□□ 0.23
BRF1-219ENST00000551787 TBC1D25Q3MII6 688 aa16.49■□□□□ 0.23
BRF1-219ENST00000551787 PHF19Q5T6S3 580 aa16.49■□□□□ 0.23
BRF1-219ENST00000551787 GPRC6AQ5T6X5 926 aa16.49■□□□□ 0.23
BRF1-219ENST00000551787 KCTD11Q693B1 232 aa16.49■□□□□ 0.23
BRF1-219ENST00000551787 LRRTM4Q86VH4 590 aa16.49■□□□□ 0.23
BRF1-219ENST00000551787 RASGEF1AQ8N9B8 481 aa16.49■□□□□ 0.23
BRF1-219ENST00000551787 OR13C4Q8NGS5 318 aa16.49■□□□□ 0.23
BRF1-219ENST00000551787 FGF11Q92914 225 aa16.49■□□□□ 0.23
BRF1-219ENST00000551787 GRAMD1AQ96CP6 724 aa16.49■□□□□ 0.23
BRF1-219ENST00000551787 PRR11Q96HE9 360 aaPredicted RBP16.49■□□□□ 0.23
BRF1-219ENST00000551787 TTC25Q96NG3 672 aa16.49■□□□□ 0.23
BRF1-219ENST00000551787 PPP1R2P1Q96PQ5 205 aa16.49■□□□□ 0.23
BRF1-219ENST00000551787 SEMA6CQ9H3T2 930 aa16.49■□□□□ 0.23
BRF1-219ENST00000551787 BPTFQ12830 3046 aa16.48■□□□□ 0.23
BRF1-219ENST00000551787 A6NCN8 305 aa16.48■□□□□ 0.23
BRF1-219ENST00000551787 GPR89AB7ZAQ6 455 aa16.48■□□□□ 0.23
BRF1-219ENST00000551787 KMOO15229 486 aa16.48■□□□□ 0.23
BRF1-219ENST00000551787 CEP104O60308 925 aa16.48■□□□□ 0.23
BRF1-219ENST00000551787 PPFIA2O75334 1257 aa16.48■□□□□ 0.23
BRF1-219ENST00000551787 CRTAMO95727 393 aa16.48■□□□□ 0.23
BRF1-219ENST00000551787 ZSCAN5DPP0CG00 497 aa16.48■□□□□ 0.23
BRF1-219ENST00000551787 GPR89BP0CG08 455 aa16.48■□□□□ 0.23
BRF1-219ENST00000551787 HOXB3P14651 431 aaPredicted RBP16.48■□□□□ 0.23
BRF1-219ENST00000551787 RPL10P27635 214 aaKnown RBP16.48■□□□□ 0.23
BRF1-219ENST00000551787 ITPKBP27987 946 aa16.48■□□□□ 0.23
BRF1-219ENST00000551787 RBMS1P29558 406 aaKnown RBP16.48■□□□□ 0.23
BRF1-219ENST00000551787 STIP1P31948 543 aaKnown RBP16.48■□□□□ 0.23
BRF1-219ENST00000551787 EIF2S3P41091 472 aaKnown RBP16.48■□□□□ 0.23
BRF1-219ENST00000551787 CTSCP53634 463 aa16.48■□□□□ 0.23
BRF1-219ENST00000551787 CCDC173Q0VFZ6 552 aa16.48■□□□□ 0.23
BRF1-219ENST00000551787 GTF2H3Q13889 308 aa16.48■□□□□ 0.23
BRF1-219ENST00000551787 SIX1Q15475 284 aaPredicted RBP16.48■□□□□ 0.23
BRF1-219ENST00000551787 P3H1Q32P28 736 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms