RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 GLYATL1P3A0A0U1RQE8 302 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 AGAP14A8MT82 685 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 E5RI56 91 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 BTN3A1O00481 513 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 PPP6CO00743 305 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 ZNF197O14709 1029 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 TRIM24O15164 1050 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 KRT36O76013 467 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 POP4O95707 220 aaKnown RBP11.4□□□□□ -0.58
RAB5C-208ENST00000551338 CYP17A1P05093 508 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 UGT2B4P06133 528 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 CHRM1P11229 460 aaPredicted RBP11.4□□□□□ -0.58
RAB5C-208ENST00000551338 ZNF7P17097 686 aaPredicted RBP11.4□□□□□ -0.58
RAB5C-208ENST00000551338 UGT1A6P19224 532 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 CHRM3P20309 590 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 UGT1A1P22309 533 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 UGT1A4P22310 534 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 ACRV1P26436 265 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 UGT1A3P35503 534 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 UGT1A5P35504 534 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 PTPN5P54829 565 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 IL2P60568 153 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 ECT2LQ008S8 904 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 NFATC2Q13469 925 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 GPM6BQ13491 265 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 GEN1Q17RS7 908 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 TRMT5Q32P41 509 aaKnown RBP11.4□□□□□ -0.58
RAB5C-208ENST00000551338 UGT3A2Q3SY77 523 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 ACCSLQ4AC99 568 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 PREPLQ4J6C6 727 aaPredicted RBP11.4□□□□□ -0.58
RAB5C-208ENST00000551338 KHDC1Q4VXA5 237 aaKnown RBP11.4□□□□□ -0.58
RAB5C-208ENST00000551338 WLSQ5T9L3 541 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 LRRC66Q68CR7 880 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 UGT3A1Q6NUS8 523 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 PGM2L1Q6PCE3 622 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 USP45Q70EL2 814 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 NET1Q7Z628 596 aaPredicted RBP11.4□□□□□ -0.58
RAB5C-208ENST00000551338 AHI1Q8N157 1196 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 HMGCLL1Q8TB92 370 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 ITFG1Q8TB96 612 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 ZNF483Q8TF39 744 aaPredicted RBP11.4□□□□□ -0.58
RAB5C-208ENST00000551338 NAT14Q8WUY8 206 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 MYLIPQ8WY64 445 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 RSPRY1Q96DX4 576 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 SCRN2Q96FV2 425 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 LRRC3BQ96PB8 259 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 PLEKHG4BQ96PX9 1271 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 SLC2A11Q9BYW1 496 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 MCOLN1Q9GZU1 580 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 EBF2Q9HAK2 575 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 ZBTB26Q9HCK0 441 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 SARS2Q9NP81 518 aaKnown RBP11.4□□□□□ -0.58
RAB5C-208ENST00000551338 NUDT4Q9NZJ9 180 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 CRLS1Q9UJA2 301 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 GNPTGQ9UJJ9 305 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 TMCO1Q9UM00 188 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 DOCK8Q8NF50 2099 aa11.4□□□□□ -0.58
RAB5C-208ENST00000551338 LOC100653049A0A140TA62 436 aa11.39□□□□□ -0.59
RAB5C-208ENST00000551338 TSPAN11A1L157 253 aa11.39□□□□□ -0.59
RAB5C-208ENST00000551338 SYCE1LA8MT33 242 aa11.39□□□□□ -0.59
RAB5C-208ENST00000551338 A8MX80 341 aa11.39□□□□□ -0.59
RAB5C-208ENST00000551338 H0Y3Z8 333 aa11.39□□□□□ -0.59
RAB5C-208ENST00000551338 SLC9A3R1O14745 358 aaPredicted RBP11.39□□□□□ -0.59
RAB5C-208ENST00000551338 CCNT2O60583 730 aaKnown RBP11.39□□□□□ -0.59
RAB5C-208ENST00000551338 CIB2O75838 187 aa11.39□□□□□ -0.59
RAB5C-208ENST00000551338 KRT34O76011 436 aa11.39□□□□□ -0.59
RAB5C-208ENST00000551338 PSMG1O95456 288 aa11.39□□□□□ -0.59
RAB5C-208ENST00000551338 LMNAP02545 664 aaKnown RBP11.39□□□□□ -0.59
RAB5C-208ENST00000551338 CA3P07451 260 aa11.39□□□□□ -0.59
RAB5C-208ENST00000551338 FGF4P08620 206 aa11.39□□□□□ -0.59
RAB5C-208ENST00000551338 ITGB6P18564 788 aa11.39□□□□□ -0.59
RAB5C-208ENST00000551338 GNAZP19086 355 aa11.39□□□□□ -0.59
RAB5C-208ENST00000551338 FOXA1P55317 472 aa11.39□□□□□ -0.59
RAB5C-208ENST00000551338 NAA20P61599 178 aa11.39□□□□□ -0.59
RAB5C-208ENST00000551338 SH3BP2P78314 561 aa11.39□□□□□ -0.59
RAB5C-208ENST00000551338 CLCQ05315 142 aa11.39□□□□□ -0.59
RAB5C-208ENST00000551338 CBX2Q14781 532 aaPredicted RBP11.39□□□□□ -0.59
RAB5C-208ENST00000551338 PPP1R3AQ16821 1122 aa11.39□□□□□ -0.59
RAB5C-208ENST00000551338 GPR33Q49SQ1 333 aa11.39□□□□□ -0.59
RAB5C-208ENST00000551338 FBXO48Q5FWF7 155 aa11.39□□□□□ -0.59
RAB5C-208ENST00000551338 TCEAL5Q5H9L2 206 aa11.39□□□□□ -0.59
RAB5C-208ENST00000551338 LYPLAL1Q5VWZ2 237 aa11.39□□□□□ -0.59
RAB5C-208ENST00000551338 KANK2Q63ZY3 851 aa11.39□□□□□ -0.59
RAB5C-208ENST00000551338 ANKS6Q68DC2 871 aa11.39□□□□□ -0.59
RAB5C-208ENST00000551338 PTRHD1Q6GMV3 140 aaKnown RBP11.39□□□□□ -0.59
RAB5C-208ENST00000551338 PDE12Q6L8Q7 609 aaKnown RBP11.39□□□□□ -0.59
RAB5C-208ENST00000551338 TXNDC11Q6PKC3 985 aa11.39□□□□□ -0.59
RAB5C-208ENST00000551338 GDPD4Q6W3E5 623 aa11.39□□□□□ -0.59
RAB5C-208ENST00000551338 RIPOR1Q6ZS17 1223 aa11.39□□□□□ -0.59
RAB5C-208ENST00000551338 RFLNAQ6ZTI6 216 aa11.39□□□□□ -0.59
RAB5C-208ENST00000551338 PLPP6Q8IY26 295 aa11.39□□□□□ -0.59
RAB5C-208ENST00000551338 ADGRG2Q8IZP9 1017 aa11.39□□□□□ -0.59
RAB5C-208ENST00000551338 CLYBLQ8N0X4 340 aa11.39□□□□□ -0.59
RAB5C-208ENST00000551338 NXPE1Q8N323 547 aa11.39□□□□□ -0.59
RAB5C-208ENST00000551338 NAT16Q8N8M0 369 aa11.39□□□□□ -0.59
RAB5C-208ENST00000551338 OR2A12Q8NGT7 310 aa11.39□□□□□ -0.59
RAB5C-208ENST00000551338 RP9Q8TA86 221 aaKnown RBP11.39□□□□□ -0.59
RAB5C-208ENST00000551338 TRPC4APQ8TEL6 797 aa11.39□□□□□ -0.59
RAB5C-208ENST00000551338 FRS2Q8WU20 508 aa11.39□□□□□ -0.59
RAB5C-208ENST00000551338 SMG7Q92540 1137 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms