RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 ZFYVE1Q9HBF4 777 aa12.69□□□□□ -0.38
PTCH1-221ENST00000550914 TRIM39Q9HCM9 518 aa12.69□□□□□ -0.38
PTCH1-221ENST00000550914 APMAPQ9HDC9 416 aa12.69□□□□□ -0.38
PTCH1-221ENST00000550914 DTLQ9NZJ0 730 aa12.69□□□□□ -0.38
PTCH1-221ENST00000550914 UVRAGQ9P2Y5 699 aa12.69□□□□□ -0.38
PTCH1-221ENST00000550914 ATXN10Q9UBB4 475 aa12.69□□□□□ -0.38
PTCH1-221ENST00000550914 ZNF487B1APH4 448 aa12.68□□□□□ -0.38
PTCH1-221ENST00000550914 CHUKO15111 745 aa12.68□□□□□ -0.38
PTCH1-221ENST00000550914 MTA2O94776 668 aa12.68□□□□□ -0.38
PTCH1-221ENST00000550914 PROSCO94903 275 aa12.68□□□□□ -0.38
PTCH1-221ENST00000550914 SLC25A14O95258 325 aaPredicted RBP12.68□□□□□ -0.38
PTCH1-221ENST00000550914 JCHAINP01591 159 aa12.68□□□□□ -0.38
PTCH1-221ENST00000550914 PRKAR1AP10644 381 aa12.68□□□□□ -0.38
PTCH1-221ENST00000550914 ZNF8P17098 575 aaPredicted RBP12.68□□□□□ -0.38
PTCH1-221ENST00000550914 TCN2P20062 427 aa12.68□□□□□ -0.38
PTCH1-221ENST00000550914 OAS2P29728 719 aaKnown RBP12.68□□□□□ -0.38
PTCH1-221ENST00000550914 MAPK9P45984 424 aa12.68□□□□□ -0.38
PTCH1-221ENST00000550914 FOXK1P85037 733 aa12.68□□□□□ -0.38
PTCH1-221ENST00000550914 GBE1Q04446 702 aa12.68□□□□□ -0.38
PTCH1-221ENST00000550914 PPIDQ08752 370 aaKnown RBP12.68□□□□□ -0.38
PTCH1-221ENST00000550914 SLC10A2Q12908 348 aaPredicted RBP12.68□□□□□ -0.38
PTCH1-221ENST00000550914 SEPT6Q14141 434 aa12.68□□□□□ -0.38
PTCH1-221ENST00000550914 IL11RAQ14626 422 aa12.68□□□□□ -0.38
PTCH1-221ENST00000550914 SLC14A2Q15849 920 aa12.68□□□□□ -0.38
PTCH1-221ENST00000550914 SKIDA1Q1XH10 827 aa12.68□□□□□ -0.38
PTCH1-221ENST00000550914 TMEM26Q6ZUK4 368 aa12.68□□□□□ -0.38
PTCH1-221ENST00000550914 VSIG1Q86XK7 387 aa12.68□□□□□ -0.38
PTCH1-221ENST00000550914 RBM12BQ8IXT5 1001 aaKnown RBP12.68□□□□□ -0.38
PTCH1-221ENST00000550914 TRAM1L1Q8N609 369 aa12.68□□□□□ -0.38
PTCH1-221ENST00000550914 CCNYQ8ND76 341 aa12.68□□□□□ -0.38
PTCH1-221ENST00000550914 PLEKHG4BQ96PX9 1271 aa12.68□□□□□ -0.38
PTCH1-221ENST00000550914 SRPK1Q96SB4 655 aaKnown RBP12.68□□□□□ -0.38
PTCH1-221ENST00000550914 TIMM29Q9BSF4 260 aa12.68□□□□□ -0.38
PTCH1-221ENST00000550914 SPATA16Q9BXB7 569 aa12.68□□□□□ -0.38
PTCH1-221ENST00000550914 TBC1D10AQ9BXI6 508 aa12.68□□□□□ -0.38
PTCH1-221ENST00000550914 XPO4Q9C0E2 1151 aaKnown RBP12.68□□□□□ -0.38
PTCH1-221ENST00000550914 OR2AG1Q9H205 316 aa12.68□□□□□ -0.38
PTCH1-221ENST00000550914 MAGEE1Q9HCI5 957 aa12.68□□□□□ -0.38
PTCH1-221ENST00000550914 PRDM8Q9NQV8 689 aa12.68□□□□□ -0.38
PTCH1-221ENST00000550914 KLC4Q9NSK0 619 aa12.68□□□□□ -0.38
PTCH1-221ENST00000550914 CAPN11Q9UMQ6 739 aa12.68□□□□□ -0.38
PTCH1-221ENST00000550914 KCTD3Q9Y597 815 aa12.68□□□□□ -0.38
PTCH1-221ENST00000550914 RPS6KL1Q9Y6S9 549 aa12.68□□□□□ -0.38
PTCH1-221ENST00000550914 CENPEQ02224 2701 aa12.68□□□□□ -0.38
PTCH1-221ENST00000550914 NOTCH2Q04721 2471 aa12.67□□□□□ -0.38
PTCH1-221ENST00000550914 GOLGA6L3A6NEY3 463 aa12.67□□□□□ -0.38
PTCH1-221ENST00000550914 PRR19A6NJB7 356 aa12.67□□□□□ -0.38
PTCH1-221ENST00000550914 KMOO15229 486 aa12.67□□□□□ -0.38
PTCH1-221ENST00000550914 VEGFDO43915 354 aa12.67□□□□□ -0.38
PTCH1-221ENST00000550914 UBXN7O94888 489 aa12.67□□□□□ -0.38
PTCH1-221ENST00000550914 VIPP01282 170 aa12.67□□□□□ -0.38
PTCH1-221ENST00000550914 NFKBIBQ15653 356 aa12.67□□□□□ -0.38
PTCH1-221ENST00000550914 WASH2PQ6VEQ5 465 aa12.67□□□□□ -0.38
PTCH1-221ENST00000550914 ADGRG6Q86SQ4 1221 aa12.67□□□□□ -0.38
PTCH1-221ENST00000550914 UNC5BQ8IZJ1 945 aa12.67□□□□□ -0.38
PTCH1-221ENST00000550914 CNTD1Q8N815 330 aa12.67□□□□□ -0.38
PTCH1-221ENST00000550914 GLYATL1Q969I3 302 aa12.67□□□□□ -0.38
PTCH1-221ENST00000550914 EID2BQ96D98 161 aa12.67□□□□□ -0.38
PTCH1-221ENST00000550914 ABHD17AQ96GS6 310 aa12.67□□□□□ -0.38
PTCH1-221ENST00000550914 RNF157Q96PX1 679 aa12.67□□□□□ -0.38
PTCH1-221ENST00000550914 TRIB3Q96RU7 358 aa12.67□□□□□ -0.38
PTCH1-221ENST00000550914 ULBP3Q9BZM4 244 aa12.67□□□□□ -0.38
PTCH1-221ENST00000550914 OSGEPL1Q9H4B0 414 aa12.67□□□□□ -0.38
PTCH1-221ENST00000550914 ZNF768Q9H5H4 540 aaKnown RBP12.67□□□□□ -0.38
PTCH1-221ENST00000550914 WASH6PQ9NQA3 447 aa12.67□□□□□ -0.38
PTCH1-221ENST00000550914 POT1Q9NUX5 634 aa12.67□□□□□ -0.38
PTCH1-221ENST00000550914 OGFRQ9NZT2 677 aa12.67□□□□□ -0.38
PTCH1-221ENST00000550914 CTTNBP2NLQ9P2B4 639 aa12.67□□□□□ -0.38
PTCH1-221ENST00000550914 KLHL3Q9UH77 587 aa12.67□□□□□ -0.38
PTCH1-221ENST00000550914 NENFQ9UMX5 172 aa12.67□□□□□ -0.38
PTCH1-221ENST00000550914 LUC7L2Q9Y383 392 aaKnown RBP12.67□□□□□ -0.38
PTCH1-221ENST00000550914 PCDHB3Q9Y5E6 796 aa12.67□□□□□ -0.38
PTCH1-221ENST00000550914 UNC79Q9P2D8 2635 aa12.66□□□□□ -0.38
PTCH1-221ENST00000550914 SEC16AO15027 2179 aa12.66□□□□□ -0.38
PTCH1-221ENST00000550914 CLEC18AA5D8T8 446 aa12.66□□□□□ -0.38
PTCH1-221ENST00000550914 KCNK1O00180 336 aa12.66□□□□□ -0.38
PTCH1-221ENST00000550914 RECKO95980 971 aa12.66□□□□□ -0.38
PTCH1-221ENST00000550914 H2AFZP0C0S5 128 aa12.66□□□□□ -0.38
PTCH1-221ENST00000550914 ZNF7P17097 686 aaPredicted RBP12.66□□□□□ -0.38
PTCH1-221ENST00000550914 KDELR1P24390 212 aa12.66□□□□□ -0.38
PTCH1-221ENST00000550914 GJC1P36383 396 aa12.66□□□□□ -0.38
PTCH1-221ENST00000550914 SLC19A1P41440 591 aa12.66□□□□□ -0.38
PTCH1-221ENST00000550914 GFERP55789 205 aa12.66□□□□□ -0.38
PTCH1-221ENST00000550914 TAS2R40P59535 323 aa12.66□□□□□ -0.38
PTCH1-221ENST00000550914 TPM4P67936 248 aa12.66□□□□□ -0.38
PTCH1-221ENST00000550914 FANCCQ00597 558 aa12.66□□□□□ -0.38
PTCH1-221ENST00000550914 ZBTB17Q13105 803 aa12.66□□□□□ -0.38
PTCH1-221ENST00000550914 UBAP2LQ14157 1087 aaKnown RBP12.66□□□□□ -0.38
PTCH1-221ENST00000550914 INSCQ1MX18 579 aa12.66□□□□□ -0.38
PTCH1-221ENST00000550914 DEFB109BQ30KR1 87 aa12.66□□□□□ -0.38
PTCH1-221ENST00000550914 LACTB2Q53H82 288 aaPredicted RBP12.66□□□□□ -0.38
PTCH1-221ENST00000550914 AGAP9Q5VTM2 703 aa12.66□□□□□ -0.38
PTCH1-221ENST00000550914 CYB5D1Q6P9G0 228 aa12.66□□□□□ -0.38
PTCH1-221ENST00000550914 ABRAXAS1Q6UWZ7 409 aa12.66□□□□□ -0.38
PTCH1-221ENST00000550914 C6orf15Q6UXA7 325 aaPredicted RBP12.66□□□□□ -0.38
PTCH1-221ENST00000550914 CLEC18BQ6UXF7 455 aa12.66□□□□□ -0.38
PTCH1-221ENST00000550914 H2AFVQ71UI9 128 aa12.66□□□□□ -0.38
PTCH1-221ENST00000550914 PRSS42Q7Z5A4 293 aa12.66□□□□□ -0.38
PTCH1-221ENST00000550914 TMC3Q7Z5M5 1100 aa12.66□□□□□ -0.38
PTCH1-221ENST00000550914 LRRTM4Q86VH4 590 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms