RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 CEP112Q8N8E3 955 aa13.32□□□□□ -0.28
NUP188-211ENST00000550219 RCBTB1Q8NDN9 531 aa13.32□□□□□ -0.28
NUP188-211ENST00000550219 MNS1Q8NEH6 495 aa13.32□□□□□ -0.28
NUP188-211ENST00000550219 LPCAT1Q8NF37 534 aa13.32□□□□□ -0.28
NUP188-211ENST00000550219 SNRNP27Q8WVK2 155 aaKnown RBP13.32□□□□□ -0.28
NUP188-211ENST00000550219 PIH1D2Q8WWB5 315 aa13.32□□□□□ -0.28
NUP188-211ENST00000550219 HTR3CQ8WXA8 447 aa13.32□□□□□ -0.28
NUP188-211ENST00000550219 USP7Q93009 1102 aa13.32□□□□□ -0.28
NUP188-211ENST00000550219 SCAMP4Q969E2 229 aa13.32□□□□□ -0.28
NUP188-211ENST00000550219 RUNDC3BQ96NL0 473 aa13.32□□□□□ -0.28
NUP188-211ENST00000550219 OR2M4Q96R27 311 aa13.32□□□□□ -0.28
NUP188-211ENST00000550219 VAT1Q99536 393 aa13.32□□□□□ -0.28
NUP188-211ENST00000550219 TMEM121Q9BTD3 319 aa13.32□□□□□ -0.28
NUP188-211ENST00000550219 ABCG8Q9H221 673 aa13.32□□□□□ -0.28
NUP188-211ENST00000550219 C10orf88Q9H8K7 445 aa13.32□□□□□ -0.28
NUP188-211ENST00000550219 RRAGDQ9NQL2 400 aaPredicted RBP13.32□□□□□ -0.28
NUP188-211ENST00000550219 TRNAU1APQ9NX07 287 aaKnown RBP13.32□□□□□ -0.28
NUP188-211ENST00000550219 AKAP7Q9P0M2 348 aaPredicted RBP13.32□□□□□ -0.28
NUP188-211ENST00000550219 AMACRQ9UHK6 382 aa13.32□□□□□ -0.28
NUP188-211ENST00000550219 FEZ2Q9UHY8 353 aaPredicted RBP13.32□□□□□ -0.28
NUP188-211ENST00000550219 ZNF148Q9UQR1 794 aa13.32□□□□□ -0.28
NUP188-211ENST00000550219 CHKBQ9Y259 395 aa13.32□□□□□ -0.28
NUP188-211ENST00000550219 NEU2Q9Y3R4 380 aa13.32□□□□□ -0.28
NUP188-211ENST00000550219 BPTFQ12830 3046 aa13.32□□□□□ -0.28
NUP188-211ENST00000550219 CAPN8A6NHC0 703 aa13.31□□□□□ -0.28
NUP188-211ENST00000550219 PYCARD-AS1I3L0S3 204 aa13.31□□□□□ -0.28
NUP188-211ENST00000550219 KCNK1O00180 336 aa13.31□□□□□ -0.28
NUP188-211ENST00000550219 B4GAT1O43505 415 aa13.31□□□□□ -0.28
NUP188-211ENST00000550219 ASMTLO95671 621 aa13.31□□□□□ -0.28
NUP188-211ENST00000550219 CPNE6O95741 557 aa13.31□□□□□ -0.28
NUP188-211ENST00000550219 SOD1P00441 154 aa13.31□□□□□ -0.28
NUP188-211ENST00000550219 JCHAINP01591 159 aa13.31□□□□□ -0.28
NUP188-211ENST00000550219 PTPN3P26045 913 aa13.31□□□□□ -0.28
NUP188-211ENST00000550219 PTGIRP43119 386 aa13.31□□□□□ -0.28
NUP188-211ENST00000550219 ZBTB17Q13105 803 aa13.31□□□□□ -0.28
NUP188-211ENST00000550219 MANEAQ5SRI9 462 aa13.31□□□□□ -0.28
NUP188-211ENST00000550219 NKAIN2Q5VXU1 208 aa13.31□□□□□ -0.28
NUP188-211ENST00000550219 CCDC137Q6PK04 289 aaKnown RBP13.31□□□□□ -0.28
NUP188-211ENST00000550219 TECPR1Q7Z6L1 1165 aa13.31□□□□□ -0.28
NUP188-211ENST00000550219 ZNF761Q86XN6 746 aaPredicted RBP13.31□□□□□ -0.28
NUP188-211ENST00000550219 NAGSQ8N159 534 aa13.31□□□□□ -0.28
NUP188-211ENST00000550219 CNTD1Q8N815 330 aa13.31□□□□□ -0.28
NUP188-211ENST00000550219 FAM71DQ8N9W8 422 aa13.31□□□□□ -0.28
NUP188-211ENST00000550219 JPH3Q8WXH2 748 aaPredicted RBP13.31□□□□□ -0.28
NUP188-211ENST00000550219 TMEM159Q96B96 161 aa13.31□□□□□ -0.28
NUP188-211ENST00000550219 WBP1Q96G27 269 aa13.31□□□□□ -0.28
NUP188-211ENST00000550219 CCDC74BQ96LY2 380 aa13.31□□□□□ -0.28
NUP188-211ENST00000550219 AGAP2Q99490 1192 aa13.31□□□□□ -0.28
NUP188-211ENST00000550219 TDRD1Q9BXT4 1180 aaKnown RBP13.31□□□□□ -0.28
NUP188-211ENST00000550219 DDX47Q9H0S4 455 aaKnown RBP13.31□□□□□ -0.28
NUP188-211ENST00000550219 RBM22Q9NW64 420 aaKnown RBP eCLIP13.31□□□□□ -0.28
NUP188-211ENST00000550219 SLC17A4Q9Y2C5 497 aa13.31□□□□□ -0.28
NUP188-211ENST00000550219 SSUH2Q9Y2M2 353 aa13.31□□□□□ -0.28
NUP188-211ENST00000550219 ST14Q9Y5Y6 855 aa13.31□□□□□ -0.28
NUP188-211ENST00000550219 A0A0J9YYE9 177 aa13.3□□□□□ -0.28
NUP188-211ENST00000550219 CTAGE15A4D2H0 777 aa13.3□□□□□ -0.28
NUP188-211ENST00000550219 NVLO15381 856 aaKnown RBP13.3□□□□□ -0.28
NUP188-211ENST00000550219 KCNN4O15554 427 aa13.3□□□□□ -0.28
NUP188-211ENST00000550219 FZD6O60353 706 aa13.3□□□□□ -0.28
NUP188-211ENST00000550219 TRBC1P01850 177 aa13.3□□□□□ -0.28
NUP188-211ENST00000550219 HLA-DQB2P05538 268 aa13.3□□□□□ -0.28
NUP188-211ENST00000550219 IVLP07476 585 aa13.3□□□□□ -0.28
NUP188-211ENST00000550219 CTAGE8P0CG41 777 aa13.3□□□□□ -0.28
NUP188-211ENST00000550219 MPSTP25325 297 aa13.3□□□□□ -0.28
NUP188-211ENST00000550219 TEAD1P28347 426 aa13.3□□□□□ -0.28
NUP188-211ENST00000550219 GDF10P55107 478 aa13.3□□□□□ -0.28
NUP188-211ENST00000550219 C2orf54Q08AI8 447 aa13.3□□□□□ -0.28
NUP188-211ENST00000550219 P3H1Q32P28 736 aa13.3□□□□□ -0.28
NUP188-211ENST00000550219 ALG1LQ6GMV1 187 aa13.3□□□□□ -0.28
NUP188-211ENST00000550219 ADAMTSL4Q6UY14 1074 aa13.3□□□□□ -0.28
NUP188-211ENST00000550219 ZNF438Q7Z4V0 828 aa13.3□□□□□ -0.28
NUP188-211ENST00000550219 CTAGE6Q86UF2 777 aa13.3□□□□□ -0.28
NUP188-211ENST00000550219 GALNT13Q8IUC8 556 aa13.3□□□□□ -0.28
NUP188-211ENST00000550219 CTAGE4Q8IX94 777 aa13.3□□□□□ -0.28
NUP188-211ENST00000550219 MMGT1Q8N4V1 131 aa13.3□□□□□ -0.28
NUP188-211ENST00000550219 GRK7Q8WTQ7 553 aa13.3□□□□□ -0.28
NUP188-211ENST00000550219 TEKT5Q96M29 485 aa13.3□□□□□ -0.28
NUP188-211ENST00000550219 SPATA13Q96N96 652 aa13.3□□□□□ -0.28
NUP188-211ENST00000550219 FERMT1Q9BQL6 677 aa13.3□□□□□ -0.28
NUP188-211ENST00000550219 RIOK2Q9BVS4 552 aaKnown RBP13.3□□□□□ -0.28
NUP188-211ENST00000550219 CARD6Q9BX69 1037 aa13.3□□□□□ -0.28
NUP188-211ENST00000550219 HAUS2Q9NVX0 235 aa13.3□□□□□ -0.28
NUP188-211ENST00000550219 KCNK4Q9NYG8 393 aa13.3□□□□□ -0.28
NUP188-211ENST00000550219 SEPT10Q9P0V9 454 aa13.3□□□□□ -0.28
NUP188-211ENST00000550219 ACSL6Q9UKU0 697 aa13.3□□□□□ -0.28
NUP188-211ENST00000550219 TRHDEQ9UKU6 1024 aa13.3□□□□□ -0.28
NUP188-211ENST00000550219 PRKAB1Q9Y478 270 aa13.3□□□□□ -0.28
NUP188-211ENST00000550219 PCDHB11Q9Y5F2 797 aa13.3□□□□□ -0.28
NUP188-211ENST00000550219 SCN8AQ9UQD0 1980 aa13.3□□□□□ -0.28
NUP188-211ENST00000550219 TRBV23OR9-2A0A075B6M9 112 aa13.29□□□□□ -0.28
NUP188-211ENST00000550219 IGHV5-10-1A0A0J9YXX1 117 aa13.29□□□□□ -0.28
NUP188-211ENST00000550219 C1orf232A0A0U1RR37 186 aa13.29□□□□□ -0.28
NUP188-211ENST00000550219 C9orf172C9J069 976 aa13.29□□□□□ -0.28
NUP188-211ENST00000550219 J3QKU1 62 aa13.29□□□□□ -0.28
NUP188-211ENST00000550219 ZW10O43264 779 aa13.29□□□□□ -0.28
NUP188-211ENST00000550219 EFSO43281 561 aa13.29□□□□□ -0.28
NUP188-211ENST00000550219 SLC4A1P02730 911 aa13.29□□□□□ -0.28
NUP188-211ENST00000550219 CCL4P13236 92 aa13.29□□□□□ -0.28
NUP188-211ENST00000550219 ZNF30P17039 623 aa13.29□□□□□ -0.28
NUP188-211ENST00000550219 CA4P22748 312 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms