RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 SLC30A1Q9Y6M5 507 aa22.28■■□□□ 1.16
BRF1-216ENST00000550208 CCDC162PA2VCL2 907 aa22.27■■□□□ 1.16
BRF1-216ENST00000550208 AGAP14A8MT82 685 aa22.27■■□□□ 1.16
BRF1-216ENST00000550208 KIF2AO00139 706 aaPredicted RBP22.27■■□□□ 1.16
BRF1-216ENST00000550208 GRID2O43424 1007 aa22.27■■□□□ 1.16
BRF1-216ENST00000550208 VEGFDO43915 354 aa22.27■■□□□ 1.16
BRF1-216ENST00000550208 CDK14O94921 469 aa22.27■■□□□ 1.16
BRF1-216ENST00000550208 ITGALP20701 1170 aa22.27■■□□□ 1.16
BRF1-216ENST00000550208 DHX34Q14147 1143 aaKnown RBP22.27■■□□□ 1.16
BRF1-216ENST00000550208 ZRANB3Q5FWF4 1079 aa22.27■■□□□ 1.16
BRF1-216ENST00000550208 LDLRAP1Q5SW96 308 aa22.27■■□□□ 1.16
BRF1-216ENST00000550208 IZUMO3Q5VZ72 239 aa22.27■■□□□ 1.16
BRF1-216ENST00000550208 LVRNQ6Q4G3 990 aa22.27■■□□□ 1.16
BRF1-216ENST00000550208 NLRP9Q7RTR0 991 aa22.27■■□□□ 1.16
BRF1-216ENST00000550208 SNX20Q7Z614 316 aa22.27■■□□□ 1.16
BRF1-216ENST00000550208 MPP5Q8N3R9 675 aa22.27■■□□□ 1.16
BRF1-216ENST00000550208 DDHD1Q8NEL9 900 aa22.27■■□□□ 1.16
BRF1-216ENST00000550208 SCG3Q8WXD2 468 aaKnown RBP22.27■■□□□ 1.16
BRF1-216ENST00000550208 APOLD1Q96LR9 279 aa22.27■■□□□ 1.16
BRF1-216ENST00000550208 SERPINB12Q96P63 405 aa22.27■■□□□ 1.16
BRF1-216ENST00000550208 GSDMCQ9BYG8 508 aa22.27■■□□□ 1.16
BRF1-216ENST00000550208 CRLS1Q9UJA2 301 aa22.27■■□□□ 1.16
BRF1-216ENST00000550208 OR51F1A6NGY5 319 aa22.26■■□□□ 1.15
BRF1-216ENST00000550208 CHUKO15111 745 aa22.26■■□□□ 1.15
BRF1-216ENST00000550208 MLNP12872 115 aa22.26■■□□□ 1.15
BRF1-216ENST00000550208 ACVR1Q04771 509 aa22.26■■□□□ 1.15
BRF1-216ENST00000550208 ILF3Q12906 894 aaKnown RBP eCLIP22.26■■□□□ 1.15
BRF1-216ENST00000550208 N4BP2L1Q5TBK1 243 aaPredicted RBP22.26■■□□□ 1.15
BRF1-216ENST00000550208 ZCCHC8Q6NZY4 707 aaKnown RBP22.26■■□□□ 1.15
BRF1-216ENST00000550208 CHST15Q7LFX5 561 aaPredicted RBP22.26■■□□□ 1.15
BRF1-216ENST00000550208 TAS2R42Q7RTR8 314 aa22.26■■□□□ 1.15
BRF1-216ENST00000550208 ZNF572Q7Z3I7 529 aaPredicted RBP22.26■■□□□ 1.15
BRF1-216ENST00000550208 PCGF5Q86SE9 256 aa22.26■■□□□ 1.15
BRF1-216ENST00000550208 SLCO6A1Q86UG4 719 aa22.26■■□□□ 1.15
BRF1-216ENST00000550208 RASGEF1AQ8N9B8 481 aa22.26■■□□□ 1.15
BRF1-216ENST00000550208 FAM181AQ8N9Y4 354 aa22.26■■□□□ 1.15
BRF1-216ENST00000550208 FAM46DQ8NEK8 389 aa22.26■■□□□ 1.15
BRF1-216ENST00000550208 KIFC1Q9BW19 673 aa22.26■■□□□ 1.15
BRF1-216ENST00000550208 BOCQ9BWV1 1114 aa22.26■■□□□ 1.15
BRF1-216ENST00000550208 TRIM31Q9BZY9 425 aa22.26■■□□□ 1.15
BRF1-216ENST00000550208 SPATS2LQ9NUQ6 558 aaKnown RBP22.26■■□□□ 1.15
BRF1-216ENST00000550208 GPR34Q9UPC5 381 aa22.26■■□□□ 1.15
BRF1-216ENST00000550208 ZNF106Q9H2Y7 1883 aaKnown RBP22.26■■□□□ 1.15
BRF1-216ENST00000550208 PLXNB3Q9ULL4 1909 aa22.25■■□□□ 1.15
BRF1-216ENST00000550208 LY6G6EA0A0G2JKS1 128 aa22.25■■□□□ 1.15
BRF1-216ENST00000550208 NMBRP28336 390 aa22.25■■□□□ 1.15
BRF1-216ENST00000550208 CACNG1Q06432 222 aa22.25■■□□□ 1.15
BRF1-216ENST00000550208 GPR33Q49SQ1 333 aa22.25■■□□□ 1.15
BRF1-216ENST00000550208 C6orf132Q5T0Z8 1188 aa22.25■■□□□ 1.15
BRF1-216ENST00000550208 CRTC3Q6UUV7 619 aa22.25■■□□□ 1.15
BRF1-216ENST00000550208 CES3Q6UWW8 571 aa22.25■■□□□ 1.15
BRF1-216ENST00000550208 SFTPA2Q8IWL1 248 aa22.25■■□□□ 1.15
BRF1-216ENST00000550208 PIANPQ8IYJ0 282 aa22.25■■□□□ 1.15
BRF1-216ENST00000550208 NXPE1Q8N323 547 aa22.25■■□□□ 1.15
BRF1-216ENST00000550208 ULK4Q96C45 1275 aa22.25■■□□□ 1.15
BRF1-216ENST00000550208 TTC25Q96NG3 672 aa22.25■■□□□ 1.15
BRF1-216ENST00000550208 XAB2Q9HCS7 855 aaKnown RBP22.25■■□□□ 1.15
BRF1-216ENST00000550208 TOR4AQ9NXH8 423 aa22.25■■□□□ 1.15
BRF1-216ENST00000550208 SIRPGQ9P1W8 387 aa22.25■■□□□ 1.15
BRF1-216ENST00000550208 GULP1Q9UBP9 304 aa22.25■■□□□ 1.15
BRF1-216ENST00000550208 U3KQA8 63 aa22.25■■□□□ 1.15
BRF1-216ENST00000550208 TRBV5-4A0A0C4DH59 114 aa22.24■■□□□ 1.15
BRF1-216ENST00000550208 SDR42E2A6NKP2 422 aa22.24■■□□□ 1.15
BRF1-216ENST00000550208 GPR89AB7ZAQ6 455 aa22.24■■□□□ 1.15
BRF1-216ENST00000550208 RAD51CO43502 376 aa22.24■■□□□ 1.15
BRF1-216ENST00000550208 GOT2P00505 430 aaKnown RBP22.24■■□□□ 1.15
BRF1-216ENST00000550208 GPR89BP0CG08 455 aa22.24■■□□□ 1.15
BRF1-216ENST00000550208 CKMT2P17540 419 aa22.24■■□□□ 1.15
BRF1-216ENST00000550208 MSH3P20585 1137 aa22.24■■□□□ 1.15
BRF1-216ENST00000550208 CTSCP53634 463 aa22.24■■□□□ 1.15
BRF1-216ENST00000550208 DAB2P98082 770 aa22.24■■□□□ 1.15
BRF1-216ENST00000550208 CKAP4Q07065 602 aaKnown RBP22.24■■□□□ 1.15
BRF1-216ENST00000550208 GTF2H3Q13889 308 aa22.24■■□□□ 1.15
BRF1-216ENST00000550208 WHAMMP3Q1A5X7 153 aa22.24■■□□□ 1.15
BRF1-216ENST00000550208 OGFOD3Q6PK18 319 aa22.24■■□□□ 1.15
BRF1-216ENST00000550208 SLC30A9Q6PML9 568 aa22.24■■□□□ 1.15
BRF1-216ENST00000550208 TMEM220Q6QAJ8 160 aa22.24■■□□□ 1.15
BRF1-216ENST00000550208 SERPINA9Q86WD7 417 aa22.24■■□□□ 1.15
BRF1-216ENST00000550208 ZNF547Q8IVP9 402 aa22.24■■□□□ 1.15
BRF1-216ENST00000550208 PNPLA1Q8N8W4 532 aa22.24■■□□□ 1.15
BRF1-216ENST00000550208 OR6P1Q8NGX9 317 aa22.24■■□□□ 1.15
BRF1-216ENST00000550208 NAT14Q8WUY8 206 aa22.24■■□□□ 1.15
BRF1-216ENST00000550208 CCDC97Q96F63 343 aaPredicted RBP22.24■■□□□ 1.15
BRF1-216ENST00000550208 TREX1Q9NSU2 369 aa22.24■■□□□ 1.15
BRF1-216ENST00000550208 TAAR2Q9P1P5 351 aa22.24■■□□□ 1.15
BRF1-216ENST00000550208 SLC23A2Q9UGH3 650 aa22.24■■□□□ 1.15
BRF1-216ENST00000550208 SOX13Q9UN79 622 aa22.24■■□□□ 1.15
BRF1-216ENST00000550208 SNX24Q9Y343 169 aa22.24■■□□□ 1.15
BRF1-216ENST00000550208 COL5A1P20908 1838 aaPredicted RBP22.24■■□□□ 1.15
BRF1-216ENST00000550208 FAM187AA6NFU0 413 aa22.23■■□□□ 1.15
BRF1-216ENST00000550208 EFCAB8A8MWE9 144 aa22.23■■□□□ 1.15
BRF1-216ENST00000550208 KMOO15229 486 aa22.23■■□□□ 1.15
BRF1-216ENST00000550208 FTH1P19P0C7X4 201 aa22.23■■□□□ 1.15
BRF1-216ENST00000550208 ACP5P13686 325 aa22.23■■□□□ 1.15
BRF1-216ENST00000550208 AKT1P31749 480 aa22.23■■□□□ 1.15
BRF1-216ENST00000550208 FOXN2P32314 431 aa22.23■■□□□ 1.15
BRF1-216ENST00000550208 ACTR1BP42025 376 aa22.23■■□□□ 1.15
BRF1-216ENST00000550208 ACTR1AP61163 376 aa22.23■■□□□ 1.15
BRF1-216ENST00000550208 B4GALNT1Q00973 533 aa22.23■■□□□ 1.15
BRF1-216ENST00000550208 CCDC157Q569K6 752 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms