RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 ZNF569Q5MCW4 686 aa11.66□□□□□ -0.54
LETMD1-221ENST00000550100 MEI1Q5TIA1 1274 aa11.66□□□□□ -0.54
LETMD1-221ENST00000550100 CCDC70Q6NSX1 233 aa11.66□□□□□ -0.54
LETMD1-221ENST00000550100 CRTC3Q6UUV7 619 aa11.66□□□□□ -0.54
LETMD1-221ENST00000550100 XKR5Q6UX68 686 aa11.66□□□□□ -0.54
LETMD1-221ENST00000550100 FAM151BQ6UXP7 276 aa11.66□□□□□ -0.54
LETMD1-221ENST00000550100 C11orf96Q7Z7L8 435 aa11.66□□□□□ -0.54
LETMD1-221ENST00000550100 SLITRK4Q8IW52 837 aa11.66□□□□□ -0.54
LETMD1-221ENST00000550100 SYCE1Q8N0S2 351 aa11.66□□□□□ -0.54
LETMD1-221ENST00000550100 FGF11Q92914 225 aa11.66□□□□□ -0.54
LETMD1-221ENST00000550100 SLC46A1Q96NT5 459 aa11.66□□□□□ -0.54
LETMD1-221ENST00000550100 ZSCAN5AQ9BUG6 496 aa11.66□□□□□ -0.54
LETMD1-221ENST00000550100 CDH19Q9H159 772 aa11.66□□□□□ -0.54
LETMD1-221ENST00000550100 CARD9Q9H257 536 aa11.66□□□□□ -0.54
LETMD1-221ENST00000550100 TMEM9Q9P0T7 183 aa11.66□□□□□ -0.54
LETMD1-221ENST00000550100 CACNA1GO43497 2377 aa11.65□□□□□ -0.54
LETMD1-221ENST00000550100 ARHGAP6O43182 974 aa11.65□□□□□ -0.54
LETMD1-221ENST00000550100 SNX2O60749 519 aa11.65□□□□□ -0.54
LETMD1-221ENST00000550100 ANXA9O76027 345 aa11.65□□□□□ -0.54
LETMD1-221ENST00000550100 ETS1P14921 441 aa11.65□□□□□ -0.54
LETMD1-221ENST00000550100 TPH1P17752 444 aa11.65□□□□□ -0.54
LETMD1-221ENST00000550100 MPSTP25325 297 aa11.65□□□□□ -0.54
LETMD1-221ENST00000550100 CSF2RBP32927 897 aa11.65□□□□□ -0.54
LETMD1-221ENST00000550100 ETV5P41161 510 aa11.65□□□□□ -0.54
LETMD1-221ENST00000550100 CTSCP53634 463 aa11.65□□□□□ -0.54
LETMD1-221ENST00000550100 GEMP55040 296 aa11.65□□□□□ -0.54
LETMD1-221ENST00000550100 XIAPP98170 497 aa11.65□□□□□ -0.54
LETMD1-221ENST00000550100 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.65□□□□□ -0.54
LETMD1-221ENST00000550100 IYDQ6PHW0 289 aa11.65□□□□□ -0.54
LETMD1-221ENST00000550100 FOXR1Q6PIV2 292 aa11.65□□□□□ -0.54
LETMD1-221ENST00000550100 GLT6D1Q7Z4J2 308 aa11.65□□□□□ -0.54
LETMD1-221ENST00000550100 SFRP1Q8N474 314 aa11.65□□□□□ -0.54
LETMD1-221ENST00000550100 RASGEF1AQ8N9B8 481 aa11.65□□□□□ -0.54
LETMD1-221ENST00000550100 GLIS1Q8NBF1 620 aa11.65□□□□□ -0.54
LETMD1-221ENST00000550100 OR6C4Q8NGE1 309 aa11.65□□□□□ -0.54
LETMD1-221ENST00000550100 SNIP1Q8TAD8 396 aaKnown RBP11.65□□□□□ -0.54
LETMD1-221ENST00000550100 NAF1Q96HR8 494 aaKnown RBP11.65□□□□□ -0.54
LETMD1-221ENST00000550100 PLEKHG4BQ96PX9 1271 aa11.65□□□□□ -0.54
LETMD1-221ENST00000550100 TRABDQ9H4I3 376 aa11.65□□□□□ -0.54
LETMD1-221ENST00000550100 EPB41L5Q9HCM4 733 aa11.65□□□□□ -0.54
LETMD1-221ENST00000550100 LZTFL1Q9NQ48 299 aa11.65□□□□□ -0.54
LETMD1-221ENST00000550100 KLC4Q9NSK0 619 aa11.65□□□□□ -0.54
LETMD1-221ENST00000550100 PIH1D1Q9NWS0 290 aaKnown RBP11.65□□□□□ -0.54
LETMD1-221ENST00000550100 IGHV1OR21-1A0A087WYE8 117 aa11.64□□□□□ -0.55
LETMD1-221ENST00000550100 RHPN2P1A8MT19 583 aa11.64□□□□□ -0.55
LETMD1-221ENST00000550100 CDRT15L2A8MXV6 281 aa11.64□□□□□ -0.55
LETMD1-221ENST00000550100 TNFSF15O95150 251 aa11.64□□□□□ -0.55
LETMD1-221ENST00000550100 PRSS56P0CW18 603 aa11.64□□□□□ -0.55
LETMD1-221ENST00000550100 BRAFP15056 766 aa11.64□□□□□ -0.55
LETMD1-221ENST00000550100 INHBCP55103 352 aa11.64□□□□□ -0.55
LETMD1-221ENST00000550100 CCDC173Q0VFZ6 552 aa11.64□□□□□ -0.55
LETMD1-221ENST00000550100 TMEM115Q12893 351 aaPredicted RBP11.64□□□□□ -0.55
LETMD1-221ENST00000550100 C16orf72Q14CZ0 275 aa11.64□□□□□ -0.55
LETMD1-221ENST00000550100 OASLQ15646 514 aaKnown RBP11.64□□□□□ -0.55
LETMD1-221ENST00000550100 ITPRIPL1Q6GPH6 555 aa11.64□□□□□ -0.55
LETMD1-221ENST00000550100 SLC13A5Q86YT5 568 aaPredicted RBP11.64□□□□□ -0.55
LETMD1-221ENST00000550100 OR4K2Q8NGD2 314 aa11.64□□□□□ -0.55
LETMD1-221ENST00000550100 OR13C4Q8NGS5 318 aa11.64□□□□□ -0.55
LETMD1-221ENST00000550100 C1orf54Q8WWF1 131 aa11.64□□□□□ -0.55
LETMD1-221ENST00000550100 VPS35Q96QK1 796 aa11.64□□□□□ -0.55
LETMD1-221ENST00000550100 FSD1LQ9BXM9 530 aa11.64□□□□□ -0.55
LETMD1-221ENST00000550100 FAM96AQ9H5X1 160 aa11.64□□□□□ -0.55
LETMD1-221ENST00000550100 RMI1Q9H9A7 625 aa11.64□□□□□ -0.55
LETMD1-221ENST00000550100 FKBPLQ9UIM3 349 aa11.64□□□□□ -0.55
LETMD1-221ENST00000550100 LHX6Q9UPM6 363 aa11.64□□□□□ -0.55
LETMD1-221ENST00000550100 ATMQ13315 3056 aa11.64□□□□□ -0.55
LETMD1-221ENST00000550100 IGHV5-10-1A0A0J9YXX1 117 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 LDB2O43679 373 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 SGTAO43765 313 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 LIASO43766 372 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 CDK14O94921 469 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 ZNF7P17097 686 aaPredicted RBP11.63□□□□□ -0.55
LETMD1-221ENST00000550100 ITIH1P19827 911 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 CCKBRP32239 447 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 SPAM1P38567 509 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 CETN2P41208 172 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 CDKN1CP49918 316 aaPredicted RBP11.63□□□□□ -0.55
LETMD1-221ENST00000550100 ZNF140P52738 457 aaPredicted RBP11.63□□□□□ -0.55
LETMD1-221ENST00000550100 TMPRSS15P98073 1019 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 NFATC2Q13469 925 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 SNX1Q13596 522 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 PEX6Q13608 980 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 LRP8Q14114 963 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 TAF1AQ15573 450 aaPredicted RBP11.63□□□□□ -0.55
LETMD1-221ENST00000550100 PARP6Q2NL67 630 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 GPRC6AQ5T6X5 926 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 PDPK2PQ6A1A2 396 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 FAM83HQ6ZRV2 1179 aaPredicted RBP11.63□□□□□ -0.55
LETMD1-221ENST00000550100 ZNF662Q6ZS27 426 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 RCBTB1Q8NDN9 531 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 WDR36Q8NI36 951 aaKnown RBP11.63□□□□□ -0.55
LETMD1-221ENST00000550100 WDR48Q8TAF3 677 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 RTP4Q96DX8 246 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 LIN37Q96GY3 246 aaPredicted RBP11.63□□□□□ -0.55
LETMD1-221ENST00000550100 SRPK1Q96SB4 655 aaKnown RBP11.63□□□□□ -0.55
LETMD1-221ENST00000550100 TBL1YQ9BQ87 522 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 TLR10Q9BXR5 811 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 ARNT2Q9HBZ2 717 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 RAD18Q9NS91 495 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 HACD3Q9P035 362 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms