RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 SKIV2L2P42285 1042 aaKnown RBP17.22■□□□□ 0.35
LETMD1-220ENST00000549686 RAB10P61026 200 aa17.22■□□□□ 0.35
LETMD1-220ENST00000549686 PPP2CBP62714 309 aa17.22■□□□□ 0.35
LETMD1-220ENST00000549686 PPP2CAP67775 309 aa17.22■□□□□ 0.35
LETMD1-220ENST00000549686 FGL2Q14314 439 aa17.22■□□□□ 0.35
LETMD1-220ENST00000549686 ZKSCAN8Q15776 578 aaPredicted RBP17.22■□□□□ 0.35
LETMD1-220ENST00000549686 USP39Q53GS9 565 aaKnown RBP17.22■□□□□ 0.35
LETMD1-220ENST00000549686 TAF1BQ53T94 588 aaPredicted RBP17.22■□□□□ 0.35
LETMD1-220ENST00000549686 KCTD16Q68DU8 428 aa17.22■□□□□ 0.35
LETMD1-220ENST00000549686 PTRHD1Q6GMV3 140 aaKnown RBP17.22■□□□□ 0.35
LETMD1-220ENST00000549686 UGT3A1Q6NUS8 523 aa17.22■□□□□ 0.35
LETMD1-220ENST00000549686 CADM4Q8NFZ8 388 aa17.22■□□□□ 0.35
LETMD1-220ENST00000549686 KCNJ9Q92806 393 aa17.22■□□□□ 0.35
LETMD1-220ENST00000549686 CENPTQ96BT3 561 aa17.22■□□□□ 0.35
LETMD1-220ENST00000549686 HIC2Q96JB3 615 aa17.22■□□□□ 0.35
LETMD1-220ENST00000549686 BIRC8Q96P09 236 aa17.22■□□□□ 0.35
LETMD1-220ENST00000549686 EPHX3Q9H6B9 360 aa17.22■□□□□ 0.35
LETMD1-220ENST00000549686 CD93Q9NPY3 652 aa17.22■□□□□ 0.35
LETMD1-220ENST00000549686 PRMT8Q9NR22 394 aaPredicted RBP17.22■□□□□ 0.35
LETMD1-220ENST00000549686 SNX15Q9NRS6 342 aa17.22■□□□□ 0.35
LETMD1-220ENST00000549686 MKS1Q9NXB0 559 aa17.22■□□□□ 0.35
LETMD1-220ENST00000549686 TAS2R13Q9NYV9 303 aa17.22■□□□□ 0.35
LETMD1-220ENST00000549686 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.22■□□□□ 0.35
LETMD1-220ENST00000549686 TLK1Q9UKI8 766 aa17.22■□□□□ 0.35
LETMD1-220ENST00000549686 TMPRSS11EQ9UL52 423 aa17.22■□□□□ 0.35
LETMD1-220ENST00000549686 SMG5Q9UPR3 1016 aaKnown RBP17.22■□□□□ 0.35
LETMD1-220ENST00000549686 GPR89AB7ZAQ6 455 aa17.21■□□□□ 0.35
LETMD1-220ENST00000549686 H3BQF6 201 aa17.21■□□□□ 0.35
LETMD1-220ENST00000549686 TPP1O14773 563 aa17.21■□□□□ 0.35
LETMD1-220ENST00000549686 PI15O43692 258 aa17.21■□□□□ 0.35
LETMD1-220ENST00000549686 VEGFDO43915 354 aa17.21■□□□□ 0.35
LETMD1-220ENST00000549686 OR1I1O60431 355 aa17.21■□□□□ 0.35
LETMD1-220ENST00000549686 NDUFS2O75306 463 aa17.21■□□□□ 0.35
LETMD1-220ENST00000549686 VPS26AO75436 327 aa17.21■□□□□ 0.35
LETMD1-220ENST00000549686 PCCBP05166 539 aa17.21■□□□□ 0.35
LETMD1-220ENST00000549686 HOXC4P09017 264 aaPredicted RBP17.21■□□□□ 0.35
LETMD1-220ENST00000549686 OR56A5P0C7T3 313 aa17.21■□□□□ 0.35
LETMD1-220ENST00000549686 GPR89BP0CG08 455 aa17.21■□□□□ 0.35
LETMD1-220ENST00000549686 KRT4P19013 534 aa17.21■□□□□ 0.35
LETMD1-220ENST00000549686 FDXRP22570 491 aa17.21■□□□□ 0.35
LETMD1-220ENST00000549686 HNRNPA2B1P22626 353 aaKnown RBP17.21■□□□□ 0.35
LETMD1-220ENST00000549686 AKT2P31751 481 aa17.21■□□□□ 0.35
LETMD1-220ENST00000549686 TRIM23P36406 574 aa17.21■□□□□ 0.35
LETMD1-220ENST00000549686 SLC26A3P40879 764 aa17.21■□□□□ 0.35
LETMD1-220ENST00000549686 CCNFP41002 786 aa17.21■□□□□ 0.35
LETMD1-220ENST00000549686 ABCG1P45844 678 aa17.21■□□□□ 0.35
LETMD1-220ENST00000549686 SLC18A2Q05940 514 aa17.21■□□□□ 0.35
LETMD1-220ENST00000549686 IRF4Q15306 451 aa17.21■□□□□ 0.35
LETMD1-220ENST00000549686 ZNF549Q6P9A3 640 aa17.21■□□□□ 0.35
LETMD1-220ENST00000549686 MICALCLQ6ZW33 695 aa17.21■□□□□ 0.35
LETMD1-220ENST00000549686 ARFGAP2Q8N6H7 521 aa17.21■□□□□ 0.35
LETMD1-220ENST00000549686 FAM174AQ8TBP5 190 aa17.21■□□□□ 0.35
LETMD1-220ENST00000549686 ZBTB9Q96C00 473 aa17.21■□□□□ 0.35
LETMD1-220ENST00000549686 ZNF514Q96K75 400 aaPredicted RBP17.21■□□□□ 0.35
LETMD1-220ENST00000549686 PANX3Q96QZ0 392 aa17.21■□□□□ 0.35
LETMD1-220ENST00000549686 KLF6Q99612 283 aaPredicted RBP17.21■□□□□ 0.35
LETMD1-220ENST00000549686 TEX101Q9BY14 249 aa17.21■□□□□ 0.35
LETMD1-220ENST00000549686 TPSD1Q9BZJ3 242 aa17.21■□□□□ 0.35
LETMD1-220ENST00000549686 WDR26Q9H7D7 661 aa17.21■□□□□ 0.35
LETMD1-220ENST00000549686 TRIM39Q9HCM9 518 aa17.21■□□□□ 0.35
LETMD1-220ENST00000549686 PHPT1Q9NRX4 125 aaPredicted RBP17.21■□□□□ 0.35
LETMD1-220ENST00000549686 KLHL42Q9P2K6 505 aa17.21■□□□□ 0.35
LETMD1-220ENST00000549686 CNOT6Q9ULM6 557 aaKnown RBP17.21■□□□□ 0.35
LETMD1-220ENST00000549686 ANKRD6Q9Y2G4 727 aa17.21■□□□□ 0.35
LETMD1-220ENST00000549686 PLXNA2O75051 1894 aa17.2■□□□□ 0.34
LETMD1-220ENST00000549686 A0A087X1B8 175 aa17.2■□□□□ 0.34
LETMD1-220ENST00000549686 A0A1W2PPM1 405 aa17.2■□□□□ 0.34
LETMD1-220ENST00000549686 E5RI56 91 aa17.2■□□□□ 0.34
LETMD1-220ENST00000549686 LAMTOR5O43504 91 aa17.2■□□□□ 0.34
LETMD1-220ENST00000549686 RHOBTB1O94844 696 aa17.2■□□□□ 0.34
LETMD1-220ENST00000549686 F7P08709 466 aaPredicted RBP17.2■□□□□ 0.34
LETMD1-220ENST00000549686 GSTM1P09488 218 aa17.2■□□□□ 0.34
LETMD1-220ENST00000549686 PYGBP11216 843 aa17.2■□□□□ 0.34
LETMD1-220ENST00000549686 COL6A2P12110 1019 aa17.2■□□□□ 0.34
LETMD1-220ENST00000549686 ATP1B2P14415 290 aaPredicted RBP17.2■□□□□ 0.34
LETMD1-220ENST00000549686 BRAFP15056 766 aa17.2■□□□□ 0.34
LETMD1-220ENST00000549686 CCT5P48643 541 aa17.2■□□□□ 0.34
LETMD1-220ENST00000549686 CSRP3P50461 194 aa17.2■□□□□ 0.34
LETMD1-220ENST00000549686 SLC18A1P54219 525 aa17.2■□□□□ 0.34
LETMD1-220ENST00000549686 TAS2R39P59534 338 aa17.2■□□□□ 0.34
LETMD1-220ENST00000549686 GSTM4Q03013 218 aa17.2■□□□□ 0.34
LETMD1-220ENST00000549686 GTF2H3Q13889 308 aa17.2■□□□□ 0.34
LETMD1-220ENST00000549686 RBM20Q5T481 1227 aaKnown RBP17.2■□□□□ 0.34
LETMD1-220ENST00000549686 SH2D5Q6ZV89 423 aa17.2■□□□□ 0.34
LETMD1-220ENST00000549686 RAPH1Q70E73 1250 aa17.2■□□□□ 0.34
LETMD1-220ENST00000549686 BMP8AQ7Z5Y6 402 aa17.2■□□□□ 0.34
LETMD1-220ENST00000549686 C11orf74Q86VG3 221 aa17.2■□□□□ 0.34
LETMD1-220ENST00000549686 SLC41A1Q8IVJ1 513 aa17.2■□□□□ 0.34
LETMD1-220ENST00000549686 COX14Q96I36 57 aa17.2■□□□□ 0.34
LETMD1-220ENST00000549686 SERAC1Q96JX3 654 aa17.2■□□□□ 0.34
LETMD1-220ENST00000549686 NDNQ99608 321 aa17.2■□□□□ 0.34
LETMD1-220ENST00000549686 GPR174Q9BXC1 333 aa17.2■□□□□ 0.34
LETMD1-220ENST00000549686 SYTL2Q9HCH5 934 aa17.2■□□□□ 0.34
LETMD1-220ENST00000549686 HS3ST3A1Q9Y663 406 aa17.2■□□□□ 0.34
LETMD1-220ENST00000549686 A0A096LPK6 155 aa17.19■□□□□ 0.34
LETMD1-220ENST00000549686 PRAMEF26H0Y7S4 382 aa17.19■□□□□ 0.34
LETMD1-220ENST00000549686 K7ESM1 405 aa17.19■□□□□ 0.34
LETMD1-220ENST00000549686 FPGTO14772 594 aa17.19■□□□□ 0.34
LETMD1-220ENST00000549686 INPP4BO15327 924 aa17.19■□□□□ 0.34
LETMD1-220ENST00000549686 SLC31A1O15431 190 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms