RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 NEPROQ6NW34 567 aa20.98■□□□□ 0.95
VPS29-206ENST00000549578 WDR93Q6P2C0 686 aa20.98■□□□□ 0.95
VPS29-206ENST00000549578 MARK2Q7KZI7 788 aaKnown RBP20.98■□□□□ 0.95
VPS29-206ENST00000549578 ADGRG6Q86SQ4 1221 aa20.98■□□□□ 0.95
VPS29-206ENST00000549578 OR56A4Q8NGH8 313 aa20.98■□□□□ 0.95
VPS29-206ENST00000549578 GSDMBQ8TAX9 411 aa20.98■□□□□ 0.95
VPS29-206ENST00000549578 NAT14Q8WUY8 206 aa20.98■□□□□ 0.95
VPS29-206ENST00000549578 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.98■□□□□ 0.95
VPS29-206ENST00000549578 CERS2Q96G23 380 aa20.98■□□□□ 0.95
VPS29-206ENST00000549578 PDXPQ96GD0 296 aa20.98■□□□□ 0.95
VPS29-206ENST00000549578 OR2AG1Q9H205 316 aa20.98■□□□□ 0.95
VPS29-206ENST00000549578 LRRC4CQ9HCJ2 640 aa20.98■□□□□ 0.95
VPS29-206ENST00000549578 TRIM39Q9HCM9 518 aa20.98■□□□□ 0.95
VPS29-206ENST00000549578 ATXN10Q9UBB4 475 aa20.98■□□□□ 0.95
VPS29-206ENST00000549578 ADAMTS9Q9P2N4 1935 aa20.97■□□□□ 0.95
VPS29-206ENST00000549578 KHNYNO15037 678 aaKnown RBP20.97■□□□□ 0.95
VPS29-206ENST00000549578 F7P08709 466 aaPredicted RBP20.97■□□□□ 0.95
VPS29-206ENST00000549578 EIF2B5Q13144 721 aaKnown RBP20.97■□□□□ 0.95
VPS29-206ENST00000549578 KYNUQ16719 465 aa20.97■□□□□ 0.95
VPS29-206ENST00000549578 ZNF470Q6ECI4 717 aa20.97■□□□□ 0.95
VPS29-206ENST00000549578 C3orf62Q6ZUJ4 267 aa20.97■□□□□ 0.95
VPS29-206ENST00000549578 PARGQ86W56 976 aa20.97■□□□□ 0.95
VPS29-206ENST00000549578 RELL1Q8IUW5 271 aa20.97■□□□□ 0.95
VPS29-206ENST00000549578 OR1E3Q8WZA6 343 aa20.97■□□□□ 0.95
VPS29-206ENST00000549578 TSACCQ96A04 125 aaPredicted RBP20.97■□□□□ 0.95
VPS29-206ENST00000549578 COPS8Q99627 209 aa20.97■□□□□ 0.95
VPS29-206ENST00000549578 BOCQ9BWV1 1114 aa20.97■□□□□ 0.95
VPS29-206ENST00000549578 NUSAP1Q9BXS6 441 aaKnown RBP20.97■□□□□ 0.95
VPS29-206ENST00000549578 PARD6BQ9BYG5 372 aa20.97■□□□□ 0.95
VPS29-206ENST00000549578 CDC42EP4Q9H3Q1 356 aaKnown RBP20.97■□□□□ 0.95
VPS29-206ENST00000549578 PPANQ9NQ55 473 aaKnown RBP20.97■□□□□ 0.95
VPS29-206ENST00000549578 IARS2Q9NSE4 1012 aaKnown RBP20.97■□□□□ 0.95
VPS29-206ENST00000549578 ZDHHC3Q9NYG2 299 aa20.97■□□□□ 0.95
VPS29-206ENST00000549578 NINJ2Q9NZG7 142 aa20.97■□□□□ 0.95
VPS29-206ENST00000549578 KLQ9UEF7 1012 aa20.97■□□□□ 0.95
VPS29-206ENST00000549578 MOSPD1Q9UJG1 213 aa20.97■□□□□ 0.95
VPS29-206ENST00000549578 SLC17A4Q9Y2C5 497 aa20.97■□□□□ 0.95
VPS29-206ENST00000549578 PCDH15Q96QU1 1955 aa20.96■□□□□ 0.95
VPS29-206ENST00000549578 SCAMP1O15126 338 aa20.96■□□□□ 0.95
VPS29-206ENST00000549578 FUCA1P04066 466 aa20.96■□□□□ 0.95
VPS29-206ENST00000549578 B4GALNT1Q00973 533 aa20.96■□□□□ 0.95
VPS29-206ENST00000549578 TMEM115Q12893 351 aaPredicted RBP20.96■□□□□ 0.95
VPS29-206ENST00000549578 ALG11Q2TAA5 492 aa20.96■□□□□ 0.95
VPS29-206ENST00000549578 MRNIPQ6NTE8 343 aa20.96■□□□□ 0.95
VPS29-206ENST00000549578 RD3Q7Z3Z2 195 aa20.96■□□□□ 0.95
VPS29-206ENST00000549578 DENND6AQ8IWF6 608 aa20.96■□□□□ 0.95
VPS29-206ENST00000549578 DCLK2Q8N568 766 aa20.96■□□□□ 0.95
VPS29-206ENST00000549578 VPS37BQ9H9H4 285 aa20.96■□□□□ 0.95
VPS29-206ENST00000549578 DNAJC28Q9NX36 388 aa20.96■□□□□ 0.95
VPS29-206ENST00000549578 SLC17A6Q9P2U8 582 aa20.96■□□□□ 0.95
VPS29-206ENST00000549578 KLF15Q9UIH9 416 aa20.96■□□□□ 0.95
VPS29-206ENST00000549578 PCYT1BQ9Y5K3 369 aaPredicted RBP20.96■□□□□ 0.95
VPS29-206ENST00000549578 TMEM131Q92545 1883 aa20.96■□□□□ 0.95
VPS29-206ENST00000549578 PRSS38A1L453 326 aa20.95■□□□□ 0.94
VPS29-206ENST00000549578 ZNF8P17098 575 aaPredicted RBP20.95■□□□□ 0.94
VPS29-206ENST00000549578 MSH3P20585 1137 aa20.95■□□□□ 0.94
VPS29-206ENST00000549578 SRP54P61011 504 aaKnown RBP20.95■□□□□ 0.94
VPS29-206ENST00000549578 FRG1Q14331 258 aaKnown RBP20.95■□□□□ 0.94
VPS29-206ENST00000549578 SLMAPQ14BN4 828 aa20.95■□□□□ 0.94
VPS29-206ENST00000549578 SF3A2Q15428 464 aaKnown RBP20.95■□□□□ 0.94
VPS29-206ENST00000549578 AARS2Q5JTZ9 985 aaKnown RBP20.95■□□□□ 0.94
VPS29-206ENST00000549578 CERS6Q6ZMG9 384 aa20.95■□□□□ 0.94
VPS29-206ENST00000549578 DET1Q7L5Y6 550 aa20.95■□□□□ 0.94
VPS29-206ENST00000549578 HID1Q8IV36 788 aa20.95■□□□□ 0.94
VPS29-206ENST00000549578 RASGEF1AQ8N9B8 481 aa20.95■□□□□ 0.94
VPS29-206ENST00000549578 GPR150Q8NGU9 434 aa20.95■□□□□ 0.94
VPS29-206ENST00000549578 TTC25Q96NG3 672 aa20.95■□□□□ 0.94
VPS29-206ENST00000549578 CYP4F12Q9HCS2 524 aa20.95■□□□□ 0.94
VPS29-206ENST00000549578 MOCS1Q9NZB8 636 aa20.95■□□□□ 0.94
VPS29-206ENST00000549578 VPS18Q9P253 973 aa20.95■□□□□ 0.94
VPS29-206ENST00000549578 IGLV3-16A0A075B6K0 115 aa20.94■□□□□ 0.94
VPS29-206ENST00000549578 TCRBV9S1A1TA0A576 114 aa20.94■□□□□ 0.94
VPS29-206ENST00000549578 ARHGAP33O14559 1287 aa20.94■□□□□ 0.94
VPS29-206ENST00000549578 TNFRSF10CO14798 259 aa20.94■□□□□ 0.94
VPS29-206ENST00000549578 VEGFDO43915 354 aa20.94■□□□□ 0.94
VPS29-206ENST00000549578 OR1I1O60431 355 aa20.94■□□□□ 0.94
VPS29-206ENST00000549578 PIAS1O75925 651 aa20.94■□□□□ 0.94
VPS29-206ENST00000549578 CDK14O94921 469 aa20.94■□□□□ 0.94
VPS29-206ENST00000549578 ZNF806P0C7X5 589 aa20.94■□□□□ 0.94
VPS29-206ENST00000549578 PMLP29590 882 aa20.94■□□□□ 0.94
VPS29-206ENST00000549578 SLC1A2P43004 574 aa20.94■□□□□ 0.94
VPS29-206ENST00000549578 PPARDQ03181 441 aa20.94■□□□□ 0.94
VPS29-206ENST00000549578 CTBP1Q13363 440 aa20.94■□□□□ 0.94
VPS29-206ENST00000549578 LYPLAL1Q5VWZ2 237 aa20.94■□□□□ 0.94
VPS29-206ENST00000549578 ASCL5Q7RTU5 278 aa20.94■□□□□ 0.94
VPS29-206ENST00000549578 SDCCAG8Q86SQ7 713 aaPredicted RBP20.94■□□□□ 0.94
VPS29-206ENST00000549578 CILP2Q8IUL8 1156 aa20.94■□□□□ 0.94
VPS29-206ENST00000549578 OR2I1PQ8NGU4 316 aa20.94■□□□□ 0.94
VPS29-206ENST00000549578 DCUN1D1Q96GG9 259 aa20.94■□□□□ 0.94
VPS29-206ENST00000549578 FAM167BQ9BTA0 163 aa20.94■□□□□ 0.94
VPS29-206ENST00000549578 ZCCHC2Q9C0B9 1178 aaKnown RBP20.94■□□□□ 0.94
VPS29-206ENST00000549578 TCEAL2Q9H3H9 227 aaPredicted RBP20.94■□□□□ 0.94
VPS29-206ENST00000549578 PARD6AQ9NPB6 346 aa20.94■□□□□ 0.94
VPS29-206ENST00000549578 SEMA4GQ9NTN9 838 aa20.94■□□□□ 0.94
VPS29-206ENST00000549578 SUFUQ9UMX1 484 aa20.94■□□□□ 0.94
VPS29-206ENST00000549578 PRKAB1Q9Y478 270 aa20.94■□□□□ 0.94
VPS29-206ENST00000549578 LRP4O75096 1905 aa20.94■□□□□ 0.94
VPS29-206ENST00000549578 DNAH14Q0VDD8 3507 aa20.94■□□□□ 0.94
VPS29-206ENST00000549578 NUAK1O60285 661 aa20.94■□□□□ 0.94
VPS29-206ENST00000549578 DNAJC6O75061 913 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms