RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 GLYATL1Q969I3 302 aa17.18■□□□□ 0.34
CHMP1A-205ENST00000548650 MAK16Q9BXY0 300 aaKnown RBP17.18■□□□□ 0.34
CHMP1A-205ENST00000548650 PRDM8Q9NQV8 689 aa17.18■□□□□ 0.34
CHMP1A-205ENST00000548650 SPO11Q9Y5K1 396 aa17.18■□□□□ 0.34
CHMP1A-205ENST00000548650 MN1Q10571 1320 aaPredicted RBP17.18■□□□□ 0.34
CHMP1A-205ENST00000548650 A0A0A6YYK5 440 aaPredicted RBP17.17■□□□□ 0.34
CHMP1A-205ENST00000548650 PRR19A6NJB7 356 aa17.17■□□□□ 0.34
CHMP1A-205ENST00000548650 CHUKO15111 745 aa17.17■□□□□ 0.34
CHMP1A-205ENST00000548650 SLC25A14O95258 325 aaPredicted RBP17.17■□□□□ 0.34
CHMP1A-205ENST00000548650 TPM1P09493 284 aa17.17■□□□□ 0.34
CHMP1A-205ENST00000548650 FAM87AP0C7U9 286 aa17.17■□□□□ 0.34
CHMP1A-205ENST00000548650 LIFP15018 202 aa17.17■□□□□ 0.34
CHMP1A-205ENST00000548650 PECAM1P16284 738 aaPredicted RBP17.17■□□□□ 0.34
CHMP1A-205ENST00000548650 BPIP17213 487 aa17.17■□□□□ 0.34
CHMP1A-205ENST00000548650 CDKN2BP42772 138 aa17.17■□□□□ 0.34
CHMP1A-205ENST00000548650 PPM1FP49593 454 aaPredicted RBP17.17■□□□□ 0.34
CHMP1A-205ENST00000548650 TBR1Q16650 682 aa17.17■□□□□ 0.34
CHMP1A-205ENST00000548650 PLA2G4EQ3MJ16 856 aa17.17■□□□□ 0.34
CHMP1A-205ENST00000548650 SNAP47Q5SQN1 464 aa17.17■□□□□ 0.34
CHMP1A-205ENST00000548650 CRTC3Q6UUV7 619 aa17.17■□□□□ 0.34
CHMP1A-205ENST00000548650 XKR5Q6UX68 686 aa17.17■□□□□ 0.34
CHMP1A-205ENST00000548650 SH3KBP1Q96B97 665 aa17.17■□□□□ 0.34
CHMP1A-205ENST00000548650 SLC12A9Q9BXP2 914 aa17.17■□□□□ 0.34
CHMP1A-205ENST00000548650 ASPSCR1Q9BZE9 553 aa17.17■□□□□ 0.34
CHMP1A-205ENST00000548650 GLOD4Q9HC38 313 aa17.17■□□□□ 0.34
CHMP1A-205ENST00000548650 TRIM39Q9HCM9 518 aa17.17■□□□□ 0.34
CHMP1A-205ENST00000548650 RAD18Q9NS91 495 aa17.17■□□□□ 0.34
CHMP1A-205ENST00000548650 KLC4Q9NSK0 619 aa17.17■□□□□ 0.34
CHMP1A-205ENST00000548650 DDX56Q9NY93 547 aaKnown RBP17.17■□□□□ 0.34
CHMP1A-205ENST00000548650 SCHIP1Q9P0W5 487 aaPredicted RBP17.17■□□□□ 0.34
CHMP1A-205ENST00000548650 CPNE7Q9UBL6 633 aa17.17■□□□□ 0.34
CHMP1A-205ENST00000548650 OR5K4A6NMS3 321 aa17.16■□□□□ 0.34
CHMP1A-205ENST00000548650 RAD1O60671 282 aa17.16■□□□□ 0.34
CHMP1A-205ENST00000548650 PMPCBO75439 489 aa17.16■□□□□ 0.34
CHMP1A-205ENST00000548650 NDST3O95803 873 aa17.16■□□□□ 0.34
CHMP1A-205ENST00000548650 ITGB6P18564 788 aa17.16■□□□□ 0.34
CHMP1A-205ENST00000548650 COMTP21964 271 aa17.16■□□□□ 0.34
CHMP1A-205ENST00000548650 CD68P34810 354 aaPredicted RBP17.16■□□□□ 0.34
CHMP1A-205ENST00000548650 MAPK9P45984 424 aa17.16■□□□□ 0.34
CHMP1A-205ENST00000548650 NFATC3Q12968 1075 aa17.16■□□□□ 0.34
CHMP1A-205ENST00000548650 KHDC1Q4VXA5 237 aaKnown RBP17.16■□□□□ 0.34
CHMP1A-205ENST00000548650 TEX44Q53QW1 395 aa17.16■□□□□ 0.34
CHMP1A-205ENST00000548650 DCAF12Q5T6F0 453 aa17.16■□□□□ 0.34
CHMP1A-205ENST00000548650 ZNF547Q8IVP9 402 aa17.16■□□□□ 0.34
CHMP1A-205ENST00000548650 IL22RA1Q8N6P7 574 aa17.16■□□□□ 0.34
CHMP1A-205ENST00000548650 AVL9Q8NBF6 648 aa17.16■□□□□ 0.34
CHMP1A-205ENST00000548650 NCSTNQ92542 709 aa17.16■□□□□ 0.34
CHMP1A-205ENST00000548650 RTP4Q96DX8 246 aa17.16■□□□□ 0.34
CHMP1A-205ENST00000548650 TEKT5Q96M29 485 aa17.16■□□□□ 0.34
CHMP1A-205ENST00000548650 PLEKHG4BQ96PX9 1271 aa17.16■□□□□ 0.34
CHMP1A-205ENST00000548650 TEFMQ96QE5 360 aaKnown RBP17.16■□□□□ 0.34
CHMP1A-205ENST00000548650 ARHGAP9Q9BRR9 750 aa17.16■□□□□ 0.34
CHMP1A-205ENST00000548650 TBC1D10AQ9BXI6 508 aa17.16■□□□□ 0.34
CHMP1A-205ENST00000548650 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.16■□□□□ 0.34
CHMP1A-205ENST00000548650 GPR63Q9BZJ6 419 aa17.16■□□□□ 0.34
CHMP1A-205ENST00000548650 OSGEPL1Q9H4B0 414 aa17.16■□□□□ 0.34
CHMP1A-205ENST00000548650 EPB41L1Q9H4G0 881 aa17.16■□□□□ 0.34
CHMP1A-205ENST00000548650 STARD5Q9NSY2 213 aa17.16■□□□□ 0.34
CHMP1A-205ENST00000548650 SAE1Q9UBE0 346 aaPredicted RBP17.16■□□□□ 0.34
CHMP1A-205ENST00000548650 SLC23A2Q9UGH3 650 aa17.16■□□□□ 0.34
CHMP1A-205ENST00000548650 TMPRSS11EQ9UL52 423 aa17.16■□□□□ 0.34
CHMP1A-205ENST00000548650 INTUQ9ULD6 942 aa17.16■□□□□ 0.34
CHMP1A-205ENST00000548650 A8MU76 341 aa17.15■□□□□ 0.34
CHMP1A-205ENST00000548650 PYCARD-AS1I3L0S3 204 aa17.15■□□□□ 0.34
CHMP1A-205ENST00000548650 AURKAO14965 403 aa17.15■□□□□ 0.34
CHMP1A-205ENST00000548650 PSTPIP1O43586 416 aa17.15■□□□□ 0.34
CHMP1A-205ENST00000548650 SPOPO43791 374 aa17.15■□□□□ 0.34
CHMP1A-205ENST00000548650 SLC28A2O43868 658 aa17.15■□□□□ 0.34
CHMP1A-205ENST00000548650 MTX2O75431 263 aa17.15■□□□□ 0.34
CHMP1A-205ENST00000548650 TNNT1P13805 278 aa17.15■□□□□ 0.34
CHMP1A-205ENST00000548650 MC2RQ01718 297 aa17.15■□□□□ 0.34
CHMP1A-205ENST00000548650 ADCY2Q08462 1091 aa17.15■□□□□ 0.34
CHMP1A-205ENST00000548650 WASHC5Q12768 1159 aa17.15■□□□□ 0.34
CHMP1A-205ENST00000548650 NOMO1Q15155 1222 aa17.15■□□□□ 0.34
CHMP1A-205ENST00000548650 INSCQ1MX18 579 aa17.15■□□□□ 0.34
CHMP1A-205ENST00000548650 LRRTM4Q86VH4 590 aa17.15■□□□□ 0.34
CHMP1A-205ENST00000548650 CNGA4Q8IV77 575 aa17.15■□□□□ 0.34
CHMP1A-205ENST00000548650 CACNA2D3Q8IZS8 1091 aa17.15■□□□□ 0.34
CHMP1A-205ENST00000548650 TIMM29Q9BSF4 260 aa17.15■□□□□ 0.34
CHMP1A-205ENST00000548650 SPRY4Q9C004 299 aa17.15■□□□□ 0.34
CHMP1A-205ENST00000548650 GOLPH3Q9H4A6 298 aa17.15■□□□□ 0.34
CHMP1A-205ENST00000548650 UCK1Q9HA47 277 aa17.15■□□□□ 0.34
CHMP1A-205ENST00000548650 SIDT1Q9NXL6 827 aaKnown RBP17.15■□□□□ 0.34
CHMP1A-205ENST00000548650 UBP1Q9NZI7 540 aa17.15■□□□□ 0.34
CHMP1A-205ENST00000548650 OGFRQ9NZT2 677 aa17.15■□□□□ 0.34
CHMP1A-205ENST00000548650 PILRAQ9UKJ1 303 aa17.15■□□□□ 0.34
CHMP1A-205ENST00000548650 ANKRD34CP0C6C1 535 aa17.14■□□□□ 0.33
CHMP1A-205ENST00000548650 NFKB1P19838 968 aa17.14■□□□□ 0.33
CHMP1A-205ENST00000548650 NR2C2P49116 596 aa17.14■□□□□ 0.33
CHMP1A-205ENST00000548650 HADHBP55084 474 aaKnown RBP17.14■□□□□ 0.33
CHMP1A-205ENST00000548650 GFERP55789 205 aa17.14■□□□□ 0.33
CHMP1A-205ENST00000548650 CLCA4Q14CN2 919 aa17.14■□□□□ 0.33
CHMP1A-205ENST00000548650 ODF2Q5BJF6 829 aa17.14■□□□□ 0.33
CHMP1A-205ENST00000548650 KDELC1Q6UW63 502 aa17.14■□□□□ 0.33
CHMP1A-205ENST00000548650 SPOCD1Q6ZMY3 1216 aa17.14■□□□□ 0.33
CHMP1A-205ENST00000548650 RNF214Q8ND24 703 aa17.14■□□□□ 0.33
CHMP1A-205ENST00000548650 TFB1MQ8WVM0 346 aaKnown RBP17.14■□□□□ 0.33
CHMP1A-205ENST00000548650 VPS35Q96QK1 796 aa17.14■□□□□ 0.33
CHMP1A-205ENST00000548650 SRPK1Q96SB4 655 aaKnown RBP17.14■□□□□ 0.33
CHMP1A-205ENST00000548650 CTRCQ99895 268 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms