RNA–Protein interactions for RNA: ENST00000548498.5

SLC48A1-206, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 618 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-206ENST00000548498 PPP1R12AO14974 1030 aaPredicted RBP9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 SEMA7AO75326 666 aa9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 ECEL1O95672 775 aa9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 EPOP01588 193 aa9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 JCHAINP01591 159 aa9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 KRT1P04264 644 aa9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 FGF1P05230 155 aa9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 CEACAM5P06731 702 aa9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 IVLP07476 585 aa9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 AK4P27144 223 aaPredicted RBP9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 CTNNA1P35221 906 aaKnown RBP9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 ETV3P41162 512 aa9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 COPS2P61201 443 aa9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 DSC2Q02487 901 aa9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 TEX44Q53QW1 395 aa9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 TFDP3Q5H9I0 405 aa9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 LRRC66Q68CR7 880 aa9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 ZNF787Q6DD87 383 aa9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 Q6ZVL8 140 aa9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 BBS12Q6ZW61 710 aa9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 TSPAN33Q86UF1 283 aa9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 RCOR2Q8IZ40 523 aa9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 NLGN4XQ8N0W4 816 aa9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 LRRC57Q8N9N7 239 aa9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 AGBL5Q8NDL9 886 aa9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 CCDC112Q8NEF3 446 aa9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 NLGN4YQ8NFZ3 816 aaPredicted RBP9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 OR4D9Q8NGE8 314 aa9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 KIAA1524Q8TCG1 905 aa9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 DTX3LQ8TDB6 740 aa9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 ZDHHC1Q8WTX9 485 aa9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 UBE2Q2Q8WVN8 375 aa9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 APOBEC4Q8WW27 367 aaKnown RBP9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 RTP4Q96DX8 246 aa9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 RNF31Q96EP0 1072 aa9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 COX14Q96I36 57 aa9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 TEKT5Q96M29 485 aa9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 VAT1Q99536 393 aa9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 CTRCQ99895 268 aa9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 ANP32EQ9BTT0 268 aa9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 SPRY4Q9C004 299 aa9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 PCDH9Q9HC56 1237 aa9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 MOSPD1Q9UJG1 213 aa9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 MRPS18BQ9Y676 258 aaKnown RBP9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 CSMD1Q96PZ7 3565 aa9.66□□□□□ -0.86
SLC48A1-206ENST00000548498 C2CD3Q4AC94 2353 aa9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 IGHV1OR21-1A0A087WYE8 117 aa9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 RCCD1A6NED2 376 aa9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 B4E171 279 aa9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 PPM1DO15297 605 aa9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 CAPN5O15484 640 aaPredicted RBP9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 SPOPO43791 374 aa9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 ZRANB2O95218 330 aaKnown RBP eCLIP9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 MAP3K6O95382 1288 aa9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 FUCA1P04066 466 aa9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 PDGFAP04085 211 aa9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 COL8A1P27658 744 aa9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 CSTF2P33240 577 aaKnown RBP eCLIP9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 GJC1P36383 396 aa9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 TSPAN7P41732 249 aa9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 DCDC1P59894 354 aa9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 CDK3Q00526 305 aa9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 ADCY2Q08462 1091 aa9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 WASHC5Q12768 1159 aa9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 TRA2AQ13595 282 aaKnown RBP eCLIP9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 ACOX1Q15067 660 aa9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 SPA17Q15506 151 aa9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 CLPPQ16740 277 aaPredicted RBP9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 QPCTQ16769 361 aa9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 DCAF12Q5T6F0 453 aa9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 HENMT1Q5T8I9 393 aaKnown RBP9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 C16orf46Q6P387 395 aa9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 SPOCD1Q6ZMY3 1216 aa9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 HEATR4Q86WZ0 1026 aa9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 ZNF761Q86XN6 746 aaPredicted RBP9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 KLHDC8BQ8IXV7 354 aa9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 NAGSQ8N159 534 aa9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 SSC4DQ8WTU2 575 aa9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 KIAA1143Q96AT1 154 aaPredicted RBP9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 RBM41Q96IZ5 413 aaKnown RBP9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 WDR24Q96S15 920 aa9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 SRPK1Q96SB4 655 aaKnown RBP9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 ASPSCR1Q9BZE9 553 aa9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 ABCG8Q9H221 673 aa9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 CARS2Q9HA77 564 aaKnown RBP9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 APMAPQ9HDC9 416 aa9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 PHPT1Q9NRX4 125 aaPredicted RBP9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 TAAR2Q9P1P5 351 aa9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 VPS18Q9P253 973 aa9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 IMPACTQ9P2X3 320 aa9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 PCDHA3Q9Y5H8 950 aa9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 KCNMB2Q9Y691 235 aa9.65□□□□□ -0.86
SLC48A1-206ENST00000548498 CROCCQ5TZA2 2017 aa9.65□□□□□ -0.87
SLC48A1-206ENST00000548498 LOC285095A0A1B0GVY8 99 aa9.64□□□□□ -0.87
SLC48A1-206ENST00000548498 SOWAHDA6NJG2 315 aa9.64□□□□□ -0.87
SLC48A1-206ENST00000548498 HACD1B0YJ81 288 aa9.64□□□□□ -0.87
SLC48A1-206ENST00000548498 APOC4-APOC2K7ER74 178 aa9.64□□□□□ -0.87
SLC48A1-206ENST00000548498 CST8O60676 142 aa9.64□□□□□ -0.87
SLC48A1-206ENST00000548498 APOC2P02655 101 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms