RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 RPS3P23396 243 aaKnown RBP eCLIP28.48■■■□□ 2.15
BRF1-213ENST00000548421 FMO4P31512 558 aa28.48■■■□□ 2.15
BRF1-213ENST00000548421 AKT1P31749 480 aa28.48■■■□□ 2.15
BRF1-213ENST00000548421 POLD2P49005 469 aa28.48■■■□□ 2.15
BRF1-213ENST00000548421 DNAJC3Q13217 504 aa28.48■■■□□ 2.15
BRF1-213ENST00000548421 HSP90B2PQ58FF3 399 aa28.48■■■□□ 2.15
BRF1-213ENST00000548421 DCUN1D1Q96GG9 259 aa28.48■■■□□ 2.15
BRF1-213ENST00000548421 NDNQ99608 321 aa28.48■■■□□ 2.15
BRF1-213ENST00000548421 INVSQ9Y283 1065 aa28.48■■■□□ 2.15
BRF1-213ENST00000548421 PCDHB1Q9Y5F3 818 aa28.48■■■□□ 2.15
BRF1-213ENST00000548421 PIKFYVEQ9Y2I7 2098 aa28.48■■■□□ 2.15
BRF1-213ENST00000548421 CFAP99D6REC4 459 aa28.47■■■□□ 2.15
BRF1-213ENST00000548421 ESR1P03372 595 aa28.47■■■□□ 2.15
BRF1-213ENST00000548421 RALBP11234 206 aa28.47■■■□□ 2.15
BRF1-213ENST00000548421 HNRNPA2B1P22626 353 aaKnown RBP28.47■■■□□ 2.15
BRF1-213ENST00000548421 IGFALSP35858 605 aa28.47■■■□□ 2.15
BRF1-213ENST00000548421 NUDT1P36639 197 aa28.47■■■□□ 2.15
BRF1-213ENST00000548421 INPP5AQ14642 412 aa28.47■■■□□ 2.15
BRF1-213ENST00000548421 RBM20Q5T481 1227 aaKnown RBP28.47■■■□□ 2.15
BRF1-213ENST00000548421 ZNF549Q6P9A3 640 aa28.47■■■□□ 2.15
BRF1-213ENST00000548421 SLC36A4Q6YBV0 504 aa28.47■■■□□ 2.15
BRF1-213ENST00000548421 HEATR4Q86WZ0 1026 aa28.47■■■□□ 2.15
BRF1-213ENST00000548421 DTWD2Q8NBA8 298 aa28.47■■■□□ 2.15
BRF1-213ENST00000548421 BIRC7Q96CA5 298 aa28.47■■■□□ 2.15
BRF1-213ENST00000548421 CCDC97Q96F63 343 aaPredicted RBP28.47■■■□□ 2.15
BRF1-213ENST00000548421 HIC2Q96JB3 615 aa28.47■■■□□ 2.15
BRF1-213ENST00000548421 ELMO2Q96JJ3 720 aa28.47■■■□□ 2.15
BRF1-213ENST00000548421 ATP6V1G3Q96LB4 118 aa28.47■■■□□ 2.15
BRF1-213ENST00000548421 BIRC8Q96P09 236 aa28.47■■■□□ 2.15
BRF1-213ENST00000548421 AARSD1Q9BTE6 412 aaKnown RBP28.47■■■□□ 2.15
BRF1-213ENST00000548421 MBD1Q9UIS9 605 aaPredicted RBP28.47■■■□□ 2.15
BRF1-213ENST00000548421 GNPTGQ9UJJ9 305 aa28.47■■■□□ 2.15
BRF1-213ENST00000548421 COMMD10Q9Y6G5 202 aa28.47■■■□□ 2.15
BRF1-213ENST00000548421 CEP192Q8TEP8 1941 aa28.47■■■□□ 2.15
BRF1-213ENST00000548421 MSH3P20585 1137 aa28.46■■■□□ 2.15
BRF1-213ENST00000548421 TRIM23P36406 574 aa28.46■■■□□ 2.15
BRF1-213ENST00000548421 CDK3Q00526 305 aa28.46■■■□□ 2.15
BRF1-213ENST00000548421 B4GALNT1Q00973 533 aa28.46■■■□□ 2.15
BRF1-213ENST00000548421 POU4F1Q01851 419 aa28.46■■■□□ 2.15
BRF1-213ENST00000548421 TTMPQ5BVD1 217 aa28.46■■■□□ 2.15
BRF1-213ENST00000548421 FAM45BPQ6NSW5 357 aa28.46■■■□□ 2.15
BRF1-213ENST00000548421 TIFABQ6ZNK6 161 aa28.46■■■□□ 2.15
BRF1-213ENST00000548421 TRABD2AQ86V40 505 aa28.46■■■□□ 2.15
BRF1-213ENST00000548421 ACVR1CQ8NER5 493 aa28.46■■■□□ 2.15
BRF1-213ENST00000548421 CADM4Q8NFZ8 388 aa28.46■■■□□ 2.15
BRF1-213ENST00000548421 FAM45AQ8TCE6 357 aa28.46■■■□□ 2.15
BRF1-213ENST00000548421 COX14Q96I36 57 aa28.46■■■□□ 2.15
BRF1-213ENST00000548421 TEX101Q9BY14 249 aa28.46■■■□□ 2.15
BRF1-213ENST00000548421 WDR26Q9H7D7 661 aa28.46■■■□□ 2.15
BRF1-213ENST00000548421 SLC39A10Q9ULF5 831 aa28.46■■■□□ 2.15
BRF1-213ENST00000548421 DMTF1Q9Y222 760 aa28.46■■■□□ 2.15
BRF1-213ENST00000548421 ZBTB32Q9Y2Y4 487 aaPredicted RBP28.46■■■□□ 2.15
BRF1-213ENST00000548421 MTX2O75431 263 aa28.46■■■□□ 2.15
BRF1-213ENST00000548421 MT-ND3P03897 115 aa28.46■■■□□ 2.15
BRF1-213ENST00000548421 PKMP14618 531 aaKnown RBP28.46■■■□□ 2.15
BRF1-213ENST00000548421 AKT2P31751 481 aa28.46■■■□□ 2.15
BRF1-213ENST00000548421 SERPINB8P50452 374 aa28.46■■■□□ 2.15
BRF1-213ENST00000548421 CTSL3PQ5NE16 218 aa28.46■■■□□ 2.15
BRF1-213ENST00000548421 HECTD2Q5U5R9 776 aa28.46■■■□□ 2.15
BRF1-213ENST00000548421 WDR5BQ86VZ2 330 aa28.46■■■□□ 2.15
BRF1-213ENST00000548421 ISL2Q96A47 359 aa28.46■■■□□ 2.15
BRF1-213ENST00000548421 MYOCQ99972 504 aa28.46■■■□□ 2.15
BRF1-213ENST00000548421 ZCCHC2Q9C0B9 1178 aaKnown RBP28.46■■■□□ 2.15
BRF1-213ENST00000548421 NOVA2Q9UNW9 492 aaKnown RBP28.46■■■□□ 2.15
BRF1-213ENST00000548421 FOXO6A8MYZ6 492 aa28.45■■■□□ 2.14
BRF1-213ENST00000548421 FPGTO14772 594 aa28.45■■■□□ 2.14
BRF1-213ENST00000548421 ALDOAP04075 364 aaKnown RBP28.45■■■□□ 2.14
BRF1-213ENST00000548421 ATP1B2P14415 290 aaPredicted RBP28.45■■■□□ 2.14
BRF1-213ENST00000548421 FNTBP49356 437 aa28.45■■■□□ 2.14
BRF1-213ENST00000548421 RPL6Q02878 288 aaKnown RBP28.45■■■□□ 2.14
BRF1-213ENST00000548421 USP10Q14694 798 aaKnown RBP28.45■■■□□ 2.14
BRF1-213ENST00000548421 KHDC1Q4VXA5 237 aaKnown RBP28.45■■■□□ 2.14
BRF1-213ENST00000548421 SLC41A1Q8IVJ1 513 aa28.45■■■□□ 2.14
BRF1-213ENST00000548421 MAML2Q8IZL2 1156 aaPredicted RBP28.45■■■□□ 2.14
BRF1-213ENST00000548421 CLDN19Q8N6F1 224 aa28.45■■■□□ 2.14
BRF1-213ENST00000548421 TLCD1Q96CP7 247 aa28.45■■■□□ 2.14
BRF1-213ENST00000548421 CAB39LQ9H9S4 337 aa28.45■■■□□ 2.14
BRF1-213ENST00000548421 EBF2Q9HAK2 575 aa28.45■■■□□ 2.14
BRF1-213ENST00000548421 PHPT1Q9NRX4 125 aaPredicted RBP28.45■■■□□ 2.14
BRF1-213ENST00000548421 SENP1Q9P0U3 644 aa28.45■■■□□ 2.14
BRF1-213ENST00000548421 VWA7Q9Y334 891 aa28.45■■■□□ 2.14
BRF1-213ENST00000548421 PRSS21Q9Y6M0 314 aa28.45■■■□□ 2.14
BRF1-213ENST00000548421 A0A1W2PPM1 405 aa28.44■■■□□ 2.14
BRF1-213ENST00000548421 HMGB1P1B2RPK0 211 aaPredicted RBP28.44■■■□□ 2.14
BRF1-213ENST00000548421 H3BMM5 538 aa28.44■■■□□ 2.14
BRF1-213ENST00000548421 TPP1O14773 563 aa28.44■■■□□ 2.14
BRF1-213ENST00000548421 SAT1P21673 171 aa28.44■■■□□ 2.14
BRF1-213ENST00000548421 SLC12A2P55011 1212 aa28.44■■■□□ 2.14
BRF1-213ENST00000548421 CSTF1Q05048 431 aaKnown RBP28.44■■■□□ 2.14
BRF1-213ENST00000548421 ZNF648Q5T619 568 aaPredicted RBP28.44■■■□□ 2.14
BRF1-213ENST00000548421 KCTD16Q68DU8 428 aa28.44■■■□□ 2.14
BRF1-213ENST00000548421 PTRHD1Q6GMV3 140 aaKnown RBP28.44■■■□□ 2.14
BRF1-213ENST00000548421 TRIM74Q86UV6 250 aa28.44■■■□□ 2.14
BRF1-213ENST00000548421 LONP2Q86WA8 852 aa28.44■■■□□ 2.14
BRF1-213ENST00000548421 SRRM1Q8IYB3 904 aaKnown RBP28.44■■■□□ 2.14
BRF1-213ENST00000548421 COL25A1Q9BXS0 654 aaPredicted RBP28.44■■■□□ 2.14
BRF1-213ENST00000548421 EPHX3Q9H6B9 360 aa28.44■■■□□ 2.14
BRF1-213ENST00000548421 TRIM39Q9HCM9 518 aa28.44■■■□□ 2.14
BRF1-213ENST00000548421 SNX15Q9NRS6 342 aa28.44■■■□□ 2.14
BRF1-213ENST00000548421 OR1A2Q9Y585 309 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms