RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 ZSCAN5AQ9BUG6 496 aa13.18□□□□□ -0.3
CPSF6-204ENST00000547486 TBC1D10AQ9BXI6 508 aa13.18□□□□□ -0.3
CPSF6-204ENST00000547486 GPR63Q9BZJ6 419 aa13.18□□□□□ -0.3
CPSF6-204ENST00000547486 BPIFA1Q9NP55 256 aa13.18□□□□□ -0.3
CPSF6-204ENST00000547486 KLC4Q9NSK0 619 aa13.18□□□□□ -0.3
CPSF6-204ENST00000547486 SLC39A1Q9NY26 324 aa13.18□□□□□ -0.3
CPSF6-204ENST00000547486 NFKBIL1Q9UBC1 381 aaPredicted RBP13.18□□□□□ -0.3
CPSF6-204ENST00000547486 CPNE7Q9UBL6 633 aa13.18□□□□□ -0.3
CPSF6-204ENST00000547486 PCDHB11Q9Y5F2 797 aa13.18□□□□□ -0.3
CPSF6-204ENST00000547486 PCDHGA4Q9Y5G9 962 aa13.18□□□□□ -0.3
CPSF6-204ENST00000547486 EFCAB7A8K855 629 aa13.17□□□□□ -0.3
CPSF6-204ENST00000547486 F5H423 210 aaPredicted RBP13.17□□□□□ -0.3
CPSF6-204ENST00000547486 STMND1H3BQB6 276 aa13.17□□□□□ -0.3
CPSF6-204ENST00000547486 NFKB1P19838 968 aa13.17□□□□□ -0.3
CPSF6-204ENST00000547486 CA5AP35218 305 aa13.17□□□□□ -0.3
CPSF6-204ENST00000547486 UGT1A3P35503 534 aa13.17□□□□□ -0.3
CPSF6-204ENST00000547486 CHRNA4P43681 627 aa13.17□□□□□ -0.3
CPSF6-204ENST00000547486 MARCKSL1P49006 195 aa13.17□□□□□ -0.3
CPSF6-204ENST00000547486 CLCNKAP51800 687 aa13.17□□□□□ -0.3
CPSF6-204ENST00000547486 HADHBP55084 474 aaKnown RBP13.17□□□□□ -0.3
CPSF6-204ENST00000547486 UBE2IP63279 158 aaKnown RBP13.17□□□□□ -0.3
CPSF6-204ENST00000547486 TFDP2Q14188 446 aa13.17□□□□□ -0.3
CPSF6-204ENST00000547486 SLC14A2Q15849 920 aa13.17□□□□□ -0.3
CPSF6-204ENST00000547486 ZNF569Q5MCW4 686 aa13.17□□□□□ -0.3
CPSF6-204ENST00000547486 ANKS6Q68DC2 871 aa13.17□□□□□ -0.3
CPSF6-204ENST00000547486 CRTC3Q6UUV7 619 aa13.17□□□□□ -0.3
CPSF6-204ENST00000547486 ARHGAP22Q7Z5H3 698 aa13.17□□□□□ -0.3
CPSF6-204ENST00000547486 SLC9B2Q86UD5 537 aa13.17□□□□□ -0.3
CPSF6-204ENST00000547486 ZC3H18Q86VM9 953 aaKnown RBP13.17□□□□□ -0.3
CPSF6-204ENST00000547486 FAM129CQ86XR2 697 aa13.17□□□□□ -0.3
CPSF6-204ENST00000547486 ZNF547Q8IVP9 402 aa13.17□□□□□ -0.3
CPSF6-204ENST00000547486 HTR3CQ8WXA8 447 aa13.17□□□□□ -0.3
CPSF6-204ENST00000547486 PLEKHG4BQ96PX9 1271 aa13.17□□□□□ -0.3
CPSF6-204ENST00000547486 HERPUD2Q9BSE4 406 aa13.17□□□□□ -0.3
CPSF6-204ENST00000547486 DDA1Q9BW61 102 aa13.17□□□□□ -0.3
CPSF6-204ENST00000547486 ZNF624Q9P2J8 865 aaPredicted RBP13.17□□□□□ -0.3
CPSF6-204ENST00000547486 KIR2DS5A0A0G2JLQ3 304 aa13.16□□□□□ -0.3
CPSF6-204ENST00000547486 A0A0G2JNG1 304 aa13.16□□□□□ -0.3
CPSF6-204ENST00000547486 PRR19A6NJB7 356 aa13.16□□□□□ -0.3
CPSF6-204ENST00000547486 B4E171 279 aa13.16□□□□□ -0.3
CPSF6-204ENST00000547486 B8ZZF3 427 aa13.16□□□□□ -0.3
CPSF6-204ENST00000547486 KIR2DS3K7RE56 304 aa13.16□□□□□ -0.3
CPSF6-204ENST00000547486 DUX1O43812 170 aa13.16□□□□□ -0.3
CPSF6-204ENST00000547486 LCA5LO95447 670 aa13.16□□□□□ -0.3
CPSF6-204ENST00000547486 TSPAN7P41732 249 aa13.16□□□□□ -0.3
CPSF6-204ENST00000547486 MAPK9P45984 424 aa13.16□□□□□ -0.3
CPSF6-204ENST00000547486 PPM1FP49593 454 aaPredicted RBP13.16□□□□□ -0.3
CPSF6-204ENST00000547486 WNT3AP56704 352 aa13.16□□□□□ -0.3
CPSF6-204ENST00000547486 KIR2DS5Q14953 304 aa13.16□□□□□ -0.3
CPSF6-204ENST00000547486 TBR1Q16650 682 aa13.16□□□□□ -0.3
CPSF6-204ENST00000547486 PLA2G4EQ3MJ16 856 aa13.16□□□□□ -0.3
CPSF6-204ENST00000547486 ATP13A5Q4VNC0 1218 aa13.16□□□□□ -0.3
CPSF6-204ENST00000547486 SIRPB2Q5JXA9 342 aa13.16□□□□□ -0.3
CPSF6-204ENST00000547486 PDPK2PQ6A1A2 396 aa13.16□□□□□ -0.3
CPSF6-204ENST00000547486 CCDC70Q6NSX1 233 aa13.16□□□□□ -0.3
CPSF6-204ENST00000547486 BZW1Q7L1Q6 419 aaKnown RBP13.16□□□□□ -0.3
CPSF6-204ENST00000547486 PHYKPLQ8IUZ5 450 aa13.16□□□□□ -0.3
CPSF6-204ENST00000547486 ZNF567Q8N184 647 aa13.16□□□□□ -0.3
CPSF6-204ENST00000547486 SLC25A41Q8N5S1 370 aa13.16□□□□□ -0.3
CPSF6-204ENST00000547486 KRT35Q92764 455 aa13.16□□□□□ -0.3
CPSF6-204ENST00000547486 P3H4Q92791 437 aa13.16□□□□□ -0.3
CPSF6-204ENST00000547486 SH3KBP1Q96B97 665 aa13.16□□□□□ -0.3
CPSF6-204ENST00000547486 HAUS1Q96CS2 278 aa13.16□□□□□ -0.3
CPSF6-204ENST00000547486 OXNAD1Q96HP4 312 aaPredicted RBP13.16□□□□□ -0.3
CPSF6-204ENST00000547486 MRGPRX2Q96LB1 330 aa13.16□□□□□ -0.3
CPSF6-204ENST00000547486 CTRCQ99895 268 aa13.16□□□□□ -0.3
CPSF6-204ENST00000547486 SPRY4Q9C004 299 aa13.16□□□□□ -0.3
CPSF6-204ENST00000547486 OSGEPL1Q9H4B0 414 aa13.16□□□□□ -0.3
CPSF6-204ENST00000547486 C10orf88Q9H8K7 445 aa13.16□□□□□ -0.3
CPSF6-204ENST00000547486 IL26Q9NPH9 171 aa13.16□□□□□ -0.3
CPSF6-204ENST00000547486 RAD18Q9NS91 495 aa13.16□□□□□ -0.3
CPSF6-204ENST00000547486 OGFRQ9NZT2 677 aa13.16□□□□□ -0.3
CPSF6-204ENST00000547486 FAM153AQ9UHL3 310 aa13.16□□□□□ -0.3
CPSF6-204ENST00000547486 DNAJC16Q9Y2G8 782 aa13.16□□□□□ -0.3
CPSF6-204ENST00000547486 PCDHA13Q9Y5I0 950 aa13.16□□□□□ -0.3
CPSF6-204ENST00000547486 SLC30A1Q9Y6M5 507 aa13.16□□□□□ -0.3
CPSF6-204ENST00000547486 hCG_1818297A0A087WSY0 165 aa13.15□□□□□ -0.3
CPSF6-204ENST00000547486 GPR89AB7ZAQ6 455 aa13.15□□□□□ -0.3
CPSF6-204ENST00000547486 KMOO15229 486 aa13.15□□□□□ -0.3
CPSF6-204ENST00000547486 PSTPIP1O43586 416 aa13.15□□□□□ -0.3
CPSF6-204ENST00000547486 CDK14O94921 469 aa13.15□□□□□ -0.3
CPSF6-204ENST00000547486 ZRANB2O95218 330 aaKnown RBP eCLIP13.15□□□□□ -0.3
CPSF6-204ENST00000547486 ITGB2P05107 769 aa13.15□□□□□ -0.3
CPSF6-204ENST00000547486 FAM87AP0C7U9 286 aa13.15□□□□□ -0.3
CPSF6-204ENST00000547486 GPR89BP0CG08 455 aa13.15□□□□□ -0.3
CPSF6-204ENST00000547486 BRAFP15056 766 aa13.15□□□□□ -0.3
CPSF6-204ENST00000547486 ZNF7P17097 686 aaPredicted RBP13.15□□□□□ -0.3
CPSF6-204ENST00000547486 XRCC1P18887 633 aaPredicted RBP13.15□□□□□ -0.3
CPSF6-204ENST00000547486 HMGCLP35914 325 aa13.15□□□□□ -0.3
CPSF6-204ENST00000547486 SLC19A1P41440 591 aa13.15□□□□□ -0.3
CPSF6-204ENST00000547486 EPHA4P54764 986 aa13.15□□□□□ -0.3
CPSF6-204ENST00000547486 MC2RQ01718 297 aa13.15□□□□□ -0.3
CPSF6-204ENST00000547486 SEPT7Q16181 437 aaKnown RBP13.15□□□□□ -0.3
CPSF6-204ENST00000547486 TFDP3Q5H9I0 405 aa13.15□□□□□ -0.3
CPSF6-204ENST00000547486 DCAF12Q5T6F0 453 aa13.15□□□□□ -0.3
CPSF6-204ENST00000547486 PID1Q7Z2X4 250 aa13.15□□□□□ -0.3
CPSF6-204ENST00000547486 C11orf96Q7Z7L8 435 aa13.15□□□□□ -0.3
CPSF6-204ENST00000547486 KATNAL2Q8IYT4 538 aa13.15□□□□□ -0.3
CPSF6-204ENST00000547486 RCOR2Q8IZ40 523 aa13.15□□□□□ -0.3
CPSF6-204ENST00000547486 TTC30BQ8N4P2 665 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms