RNA–Protein interactions for RNA: ENST00000547281.5

CDK4-204, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-204ENST00000547281 SQSTM1Q13501 440 aa16.02■□□□□ 0.16
CDK4-204ENST00000547281 TRA2AQ13595 282 aaKnown RBP eCLIP16.02■□□□□ 0.16
CDK4-204ENST00000547281 LY6DQ14210 128 aa16.02■□□□□ 0.16
CDK4-204ENST00000547281 TEX44Q53QW1 395 aa16.02■□□□□ 0.16
CDK4-204ENST00000547281 SFRP1Q8N474 314 aa16.02■□□□□ 0.16
CDK4-204ENST00000547281 UBL4BQ8N7F7 174 aa16.02■□□□□ 0.16
CDK4-204ENST00000547281 ZSCAN1Q8NBB4 408 aa16.02■□□□□ 0.16
CDK4-204ENST00000547281 AGBL5Q8NDL9 886 aa16.02■□□□□ 0.16
CDK4-204ENST00000547281 CCDC112Q8NEF3 446 aa16.02■□□□□ 0.16
CDK4-204ENST00000547281 SPATA22Q8NHS9 363 aa16.02■□□□□ 0.16
CDK4-204ENST00000547281 TTC9Q92623 222 aa16.02■□□□□ 0.16
CDK4-204ENST00000547281 SH3KBP1Q96B97 665 aa16.02■□□□□ 0.16
CDK4-204ENST00000547281 TAAR9Q96RI9 348 aa16.02■□□□□ 0.16
CDK4-204ENST00000547281 HERPUD2Q9BSE4 406 aa16.02■□□□□ 0.16
CDK4-204ENST00000547281 TSGA10Q9BZW7 698 aa16.02■□□□□ 0.16
CDK4-204ENST00000547281 OR2AG1Q9H205 316 aa16.02■□□□□ 0.16
CDK4-204ENST00000547281 C10orf88Q9H8K7 445 aa16.02■□□□□ 0.16
CDK4-204ENST00000547281 GRPEL1Q9HAV7 217 aa16.02■□□□□ 0.16
CDK4-204ENST00000547281 GLOD4Q9HC38 313 aa16.02■□□□□ 0.16
CDK4-204ENST00000547281 MAGEE1Q9HCI5 957 aa16.02■□□□□ 0.16
CDK4-204ENST00000547281 FOXJ2Q9P0K8 574 aa16.02■□□□□ 0.16
CDK4-204ENST00000547281 TBC1D29Q9UFV1 150 aa16.02■□□□□ 0.16
CDK4-204ENST00000547281 GUCA1BQ9UMX6 200 aa16.02■□□□□ 0.16
CDK4-204ENST00000547281 CAPN6Q9Y6Q1 641 aa16.02■□□□□ 0.16
CDK4-204ENST00000547281 F5H423 210 aaPredicted RBP16.01■□□□□ 0.15
CDK4-204ENST00000547281 NUAK1O60285 661 aa16.01■□□□□ 0.15
CDK4-204ENST00000547281 EML2O95834 649 aa16.01■□□□□ 0.15
CDK4-204ENST00000547281 MT-CYBP00156 380 aaPredicted RBP16.01■□□□□ 0.15
CDK4-204ENST00000547281 SLC2A4P14672 509 aa16.01■□□□□ 0.15
CDK4-204ENST00000547281 CD82P27701 267 aa16.01■□□□□ 0.15
CDK4-204ENST00000547281 TNNT3P45378 269 aaPredicted RBP16.01■□□□□ 0.15
CDK4-204ENST00000547281 FASLGP48023 281 aa16.01■□□□□ 0.15
CDK4-204ENST00000547281 ZNF569Q5MCW4 686 aa16.01■□□□□ 0.15
CDK4-204ENST00000547281 SNAP47Q5SQN1 464 aa16.01■□□□□ 0.15
CDK4-204ENST00000547281 ZNF648Q5T619 568 aaPredicted RBP16.01■□□□□ 0.15
CDK4-204ENST00000547281 TMEM71Q6P5X7 295 aa16.01■□□□□ 0.15
CDK4-204ENST00000547281 IYDQ6PHW0 289 aa16.01■□□□□ 0.15
CDK4-204ENST00000547281 TMC3Q7Z5M5 1100 aa16.01■□□□□ 0.15
CDK4-204ENST00000547281 SLC9B2Q86UD5 537 aa16.01■□□□□ 0.15
CDK4-204ENST00000547281 PHYKPLQ8IUZ5 450 aa16.01■□□□□ 0.15
CDK4-204ENST00000547281 GPR26Q8NDV2 337 aa16.01■□□□□ 0.15
CDK4-204ENST00000547281 NCSTNQ92542 709 aa16.01■□□□□ 0.15
CDK4-204ENST00000547281 EID2BQ96D98 161 aa16.01■□□□□ 0.15
CDK4-204ENST00000547281 SGF29Q96ES7 293 aa16.01■□□□□ 0.15
CDK4-204ENST00000547281 QKIQ96PU8 341 aaKnown RBP eCLIP16.01■□□□□ 0.15
CDK4-204ENST00000547281 TRIB3Q96RU7 358 aa16.01■□□□□ 0.15
CDK4-204ENST00000547281 FAM118BQ9BPY3 351 aa16.01■□□□□ 0.15
CDK4-204ENST00000547281 ZSCAN5AQ9BUG6 496 aa16.01■□□□□ 0.15
CDK4-204ENST00000547281 CARD9Q9H257 536 aa16.01■□□□□ 0.15
CDK4-204ENST00000547281 TRIM39Q9HCM9 518 aa16.01■□□□□ 0.15
CDK4-204ENST00000547281 UBP1Q9NZI7 540 aa16.01■□□□□ 0.15
CDK4-204ENST00000547281 KLHL8Q9P2G9 620 aaPredicted RBP16.01■□□□□ 0.15
CDK4-204ENST00000547281 ATXN10Q9UBB4 475 aa16.01■□□□□ 0.15
CDK4-204ENST00000547281 PCYT1BQ9Y5K3 369 aaPredicted RBP16.01■□□□□ 0.15
CDK4-204ENST00000547281 GOLGA6L3A6NEY3 463 aa16■□□□□ 0.15
CDK4-204ENST00000547281 A8MU76 341 aa16■□□□□ 0.15
CDK4-204ENST00000547281 APOC4-APOC2K7ER74 178 aa16■□□□□ 0.15
CDK4-204ENST00000547281 MTSS1O43312 755 aa16■□□□□ 0.15
CDK4-204ENST00000547281 DUX1O43812 170 aa16■□□□□ 0.15
CDK4-204ENST00000547281 NDST3O95803 873 aa16■□□□□ 0.15
CDK4-204ENST00000547281 APOC2P02655 101 aa16■□□□□ 0.15
CDK4-204ENST00000547281 FGF3P11487 239 aaPredicted RBP16■□□□□ 0.15
CDK4-204ENST00000547281 ZNF8P17098 575 aaPredicted RBP16■□□□□ 0.15
CDK4-204ENST00000547281 MAPK9P45984 424 aa16■□□□□ 0.15
CDK4-204ENST00000547281 OTUD4Q01804 1114 aaKnown RBP16■□□□□ 0.15
CDK4-204ENST00000547281 WASHC5Q12768 1159 aa16■□□□□ 0.15
CDK4-204ENST00000547281 SRSF6Q13247 344 aaKnown RBP16■□□□□ 0.15
CDK4-204ENST00000547281 VASH2Q86V25 355 aa16■□□□□ 0.15
CDK4-204ENST00000547281 FAM129CQ86XR2 697 aa16■□□□□ 0.15
CDK4-204ENST00000547281 LRRC8AQ8IWT6 810 aa16■□□□□ 0.15
CDK4-204ENST00000547281 RNF10Q8N5U6 811 aaKnown RBP16■□□□□ 0.15
CDK4-204ENST00000547281 ACTL9Q8TC94 416 aa16■□□□□ 0.15
CDK4-204ENST00000547281 HTR3CQ8WXA8 447 aa16■□□□□ 0.15
CDK4-204ENST00000547281 JPH3Q8WXH2 748 aaPredicted RBP16■□□□□ 0.15
CDK4-204ENST00000547281 ART4Q93070 314 aa16■□□□□ 0.15
CDK4-204ENST00000547281 TEKT5Q96M29 485 aa16■□□□□ 0.15
CDK4-204ENST00000547281 SRPK1Q96SB4 655 aaKnown RBP16■□□□□ 0.15
CDK4-204ENST00000547281 B3GNT4Q9C0J1 378 aa16■□□□□ 0.15
CDK4-204ENST00000547281 OSGEPL1Q9H4B0 414 aa16■□□□□ 0.15
CDK4-204ENST00000547281 SARS2Q9NP81 518 aaKnown RBP16■□□□□ 0.15
CDK4-204ENST00000547281 KLC4Q9NSK0 619 aa16■□□□□ 0.15
CDK4-204ENST00000547281 SLC39A1Q9NY26 324 aa16■□□□□ 0.15
CDK4-204ENST00000547281 TMEM9Q9P0T7 183 aa16■□□□□ 0.15
CDK4-204ENST00000547281 ZNF711Q9Y462 761 aa16■□□□□ 0.15
CDK4-204ENST00000547281 GCN1Q92616 2671 aaKnown RBP16■□□□□ 0.15
CDK4-204ENST00000547281 AHCTF1Q8WYP5 2266 aa15.99■□□□□ 0.15
CDK4-204ENST00000547281 OR5K4A6NMS3 321 aa15.99■□□□□ 0.15
CDK4-204ENST00000547281 MIF4GDA9UHW6 222 aaKnown RBP15.99■□□□□ 0.15
CDK4-204ENST00000547281 HACD1B0YJ81 288 aa15.99■□□□□ 0.15
CDK4-204ENST00000547281 STMND1H3BQB6 276 aa15.99■□□□□ 0.15
CDK4-204ENST00000547281 DDX3YO15523 660 aaKnown RBP15.99■□□□□ 0.15
CDK4-204ENST00000547281 KRT86O43790 486 aa15.99■□□□□ 0.15
CDK4-204ENST00000547281 TJP3O95049 919 aa15.99■□□□□ 0.15
CDK4-204ENST00000547281 NFKB1P19838 968 aa15.99■□□□□ 0.15
CDK4-204ENST00000547281 CSF2RBP32927 897 aa15.99■□□□□ 0.15
CDK4-204ENST00000547281 PTPN7P35236 360 aa15.99■□□□□ 0.15
CDK4-204ENST00000547281 EIF3EP60228 445 aaKnown RBP15.99■□□□□ 0.15
CDK4-204ENST00000547281 NOMO1Q15155 1222 aa15.99■□□□□ 0.15
CDK4-204ENST00000547281 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.99■□□□□ 0.15
CDK4-204ENST00000547281 PID1Q7Z2X4 250 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms