RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 PATE1Q8WXA2 126 aa15.7■□□□□ 0.1
DDX54-204ENST00000546898 LIN37Q96GY3 246 aaPredicted RBP15.7■□□□□ 0.1
DDX54-204ENST00000546898 TMEM74Q96NL1 305 aa15.7■□□□□ 0.1
DDX54-204ENST00000546898 TIMM29Q9BSF4 260 aa15.7■□□□□ 0.1
DDX54-204ENST00000546898 STN1Q9H668 368 aaKnown RBP15.7■□□□□ 0.1
DDX54-204ENST00000546898 ARFGAP3Q9NP61 516 aa15.7■□□□□ 0.1
DDX54-204ENST00000546898 TMPRSS11EQ9UL52 423 aa15.7■□□□□ 0.1
DDX54-204ENST00000546898 ZKSCAN5Q9Y2L8 839 aa15.7■□□□□ 0.1
DDX54-204ENST00000546898 PRKAB1Q9Y478 270 aa15.7■□□□□ 0.1
DDX54-204ENST00000546898 ARL5AQ9Y689 179 aa15.7■□□□□ 0.1
DDX54-204ENST00000546898 CCDC187A0A096LP49 1063 aa15.69■□□□□ 0.1
DDX54-204ENST00000546898 ERI2A8K979 691 aaKnown RBP15.69■□□□□ 0.1
DDX54-204ENST00000546898 BUD23O43709 281 aaKnown RBP15.69■□□□□ 0.1
DDX54-204ENST00000546898 BRINP1O60477 761 aa15.69■□□□□ 0.1
DDX54-204ENST00000546898 CDK14O94921 469 aa15.69■□□□□ 0.1
DDX54-204ENST00000546898 AP2A1O95782 977 aa15.69■□□□□ 0.1
DDX54-204ENST00000546898 CCKBRP32239 447 aa15.69■□□□□ 0.1
DDX54-204ENST00000546898 ACTN2P35609 894 aa15.69■□□□□ 0.1
DDX54-204ENST00000546898 HADHAP40939 763 aa15.69■□□□□ 0.1
DDX54-204ENST00000546898 MLLT3P42568 568 aaPredicted RBP15.69■□□□□ 0.1
DDX54-204ENST00000546898 INHBCP55103 352 aa15.69■□□□□ 0.1
DDX54-204ENST00000546898 B4GALNT1Q00973 533 aa15.69■□□□□ 0.1
DDX54-204ENST00000546898 EIF3IQ13347 325 aaKnown RBP15.69■□□□□ 0.1
DDX54-204ENST00000546898 MSLNQ13421 630 aaPredicted RBP15.69■□□□□ 0.1
DDX54-204ENST00000546898 CHRNA6Q15825 494 aa15.69■□□□□ 0.1
DDX54-204ENST00000546898 INSCQ1MX18 579 aa15.69■□□□□ 0.1
DDX54-204ENST00000546898 ZNF648Q5T619 568 aaPredicted RBP15.69■□□□□ 0.1
DDX54-204ENST00000546898 Q8N9G6 341 aaPredicted RBP15.69■□□□□ 0.1
DDX54-204ENST00000546898 AVL9Q8NBF6 648 aa15.69■□□□□ 0.1
DDX54-204ENST00000546898 OR4K2Q8NGD2 314 aa15.69■□□□□ 0.1
DDX54-204ENST00000546898 WDR36Q8NI36 951 aaKnown RBP15.69■□□□□ 0.1
DDX54-204ENST00000546898 SNIP1Q8TAD8 396 aaKnown RBP15.69■□□□□ 0.1
DDX54-204ENST00000546898 GDAP1Q8TB36 358 aa15.69■□□□□ 0.1
DDX54-204ENST00000546898 SLC37A2Q8TED4 501 aa15.69■□□□□ 0.1
DDX54-204ENST00000546898 ATXN7L3BQ96GX2 97 aa15.69■□□□□ 0.1
DDX54-204ENST00000546898 TTC25Q96NG3 672 aa15.69■□□□□ 0.1
DDX54-204ENST00000546898 TLR10Q9BXR5 811 aa15.69■□□□□ 0.1
DDX54-204ENST00000546898 STRADBQ9C0K7 418 aa15.69■□□□□ 0.1
DDX54-204ENST00000546898 ZNF148Q9UQR1 794 aa15.69■□□□□ 0.1
DDX54-204ENST00000546898 KCNK6Q9Y257 313 aa15.69■□□□□ 0.1
DDX54-204ENST00000546898 RAXQ9Y2V3 346 aa15.69■□□□□ 0.1
DDX54-204ENST00000546898 PCDHGA8Q9Y5G5 932 aa15.69■□□□□ 0.1
DDX54-204ENST00000546898 KIR2DS5A0A0G2JLQ3 304 aa15.68■□□□□ 0.1
DDX54-204ENST00000546898 A0A0G2JNG1 304 aa15.68■□□□□ 0.1
DDX54-204ENST00000546898 A6NCN8 305 aa15.68■□□□□ 0.1
DDX54-204ENST00000546898 OR5K4A6NMS3 321 aa15.68■□□□□ 0.1
DDX54-204ENST00000546898 KIR2DS3K7RE56 304 aa15.68■□□□□ 0.1
DDX54-204ENST00000546898 GAPDHSO14556 408 aaPredicted RBP15.68■□□□□ 0.1
DDX54-204ENST00000546898 CASC3O15234 703 aaKnown RBP15.68■□□□□ 0.1
DDX54-204ENST00000546898 MTX2O75431 263 aa15.68■□□□□ 0.1
DDX54-204ENST00000546898 PRAMEF1O95521 474 aa15.68■□□□□ 0.1
DDX54-204ENST00000546898 CPNE6O95741 557 aa15.68■□□□□ 0.1
DDX54-204ENST00000546898 MPOP05164 745 aa15.68■□□□□ 0.1
DDX54-204ENST00000546898 F3P13726 295 aa15.68■□□□□ 0.1
DDX54-204ENST00000546898 ZNF7P17097 686 aaPredicted RBP15.68■□□□□ 0.1
DDX54-204ENST00000546898 FDFT1P37268 417 aa15.68■□□□□ 0.1
DDX54-204ENST00000546898 TMEM115Q12893 351 aaPredicted RBP15.68■□□□□ 0.1
DDX54-204ENST00000546898 SPARCL1Q14515 664 aa15.68■□□□□ 0.1
DDX54-204ENST00000546898 KIR2DS5Q14953 304 aa15.68■□□□□ 0.1
DDX54-204ENST00000546898 TBC1D25Q3MII6 688 aa15.68■□□□□ 0.1
DDX54-204ENST00000546898 KHDC1Q4VXA5 237 aaKnown RBP15.68■□□□□ 0.1
DDX54-204ENST00000546898 C3orf38Q5JPI3 329 aa15.68■□□□□ 0.1
DDX54-204ENST00000546898 DRICH1Q6PGQ1 229 aaPredicted RBP15.68■□□□□ 0.1
DDX54-204ENST00000546898 CRTC3Q6UUV7 619 aa15.68■□□□□ 0.1
DDX54-204ENST00000546898 LINC00523Q86TU6 105 aa15.68■□□□□ 0.1
DDX54-204ENST00000546898 C1orf54Q8WWF1 131 aa15.68■□□□□ 0.1
DDX54-204ENST00000546898 ZNF578Q96N58 590 aaPredicted RBP15.68■□□□□ 0.1
DDX54-204ENST00000546898 SARS2Q9NP81 518 aaKnown RBP15.68■□□□□ 0.1
DDX54-204ENST00000546898 KLC4Q9NSK0 619 aa15.68■□□□□ 0.1
DDX54-204ENST00000546898 TBC1D29Q9UFV1 150 aa15.68■□□□□ 0.1
DDX54-204ENST00000546898 SATB2Q9UPW6 733 aa15.68■□□□□ 0.1
DDX54-204ENST00000546898 ZZEF1O43149 2961 aa15.68■□□□□ 0.1
DDX54-204ENST00000546898 FAM208BQ5VWN6 2430 aa15.67■□□□□ 0.1
DDX54-204ENST00000546898 ADAMTS20P59510 1910 aa15.67■□□□□ 0.1
DDX54-204ENST00000546898 PRR19A6NJB7 356 aa15.67■□□□□ 0.1
DDX54-204ENST00000546898 PPM1DO15297 605 aa15.67■□□□□ 0.1
DDX54-204ENST00000546898 KCNJ13O60928 360 aa15.67■□□□□ 0.1
DDX54-204ENST00000546898 EML2O95834 649 aa15.67■□□□□ 0.1
DDX54-204ENST00000546898 IFNB1P01574 187 aa15.67■□□□□ 0.1
DDX54-204ENST00000546898 VCLP18206 1134 aa15.67■□□□□ 0.1
DDX54-204ENST00000546898 ZNF140P52738 457 aaPredicted RBP15.67■□□□□ 0.1
DDX54-204ENST00000546898 ERVPABLB-1P60509 514 aa15.67■□□□□ 0.1
DDX54-204ENST00000546898 GPLD1P80108 840 aa15.67■□□□□ 0.1
DDX54-204ENST00000546898 SIX1Q15475 284 aaPredicted RBP15.67■□□□□ 0.1
DDX54-204ENST00000546898 CCNG2Q16589 344 aa15.67■□□□□ 0.1
DDX54-204ENST00000546898 MAP9Q49MG5 647 aa15.67■□□□□ 0.1
DDX54-204ENST00000546898 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.67■□□□□ 0.1
DDX54-204ENST00000546898 GPRC6AQ5T6X5 926 aa15.67■□□□□ 0.1
DDX54-204ENST00000546898 IYDQ6PHW0 289 aa15.67■□□□□ 0.1
DDX54-204ENST00000546898 SLC9B2Q86UD5 537 aa15.67■□□□□ 0.1
DDX54-204ENST00000546898 TRAPPC5Q8IUR0 188 aa15.67■□□□□ 0.1
DDX54-204ENST00000546898 ZNF547Q8IVP9 402 aa15.67■□□□□ 0.1
DDX54-204ENST00000546898 ZNF398Q8TD17 642 aa15.67■□□□□ 0.1
DDX54-204ENST00000546898 FGF11Q92914 225 aa15.67■□□□□ 0.1
DDX54-204ENST00000546898 SH3KBP1Q96B97 665 aa15.67■□□□□ 0.1
DDX54-204ENST00000546898 ZNF514Q96K75 400 aaPredicted RBP15.67■□□□□ 0.1
DDX54-204ENST00000546898 DPYSL5Q9BPU6 564 aa15.67■□□□□ 0.1
DDX54-204ENST00000546898 EPB41L5Q9HCM4 733 aa15.67■□□□□ 0.1
DDX54-204ENST00000546898 FKBPLQ9UIM3 349 aa15.67■□□□□ 0.1
DDX54-204ENST00000546898 PIKFYVEQ9Y2I7 2098 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms