RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 SGF29Q96ES7 293 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 TTC25Q96NG3 672 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 TEFMQ96QE5 360 aaKnown RBP9.25□□□□□ -0.93
YBX3-218ENST00000546298 PANX2Q96RD6 677 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 FCRL5Q96RD9 977 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 DDA1Q9BW61 102 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 OSGEPL1Q9H4B0 414 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 KLC4Q9NSK0 619 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 SLC39A1Q9NY26 324 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 UBP1Q9NZI7 540 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 FOXJ2Q9P0K8 574 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 PDP2Q9P2J9 529 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 SAE1Q9UBE0 346 aaPredicted RBP9.25□□□□□ -0.93
YBX3-218ENST00000546298 A6NCN8 305 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 LILRA5A6NI73 299 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 C9orf172C9J069 976 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 H7C0C1 242 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 APOC4-APOC2K7ER74 178 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 EFSO43281 561 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 PPFIA2O75334 1257 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 ZNF189O75820 626 aaPredicted RBP9.24□□□□□ -0.93
YBX3-218ENST00000546298 ANXA9O76027 345 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 STK10O94804 968 aaKnown RBP9.24□□□□□ -0.93
YBX3-218ENST00000546298 VIPP01282 170 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 APOC2P02655 101 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 PRB1P04280 392 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 FGF3P11487 239 aaPredicted RBP9.24□□□□□ -0.93
YBX3-218ENST00000546298 ZNF7P17097 686 aaPredicted RBP9.24□□□□□ -0.93
YBX3-218ENST00000546298 BPIP17213 487 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 NFKB1P19838 968 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 HLA-DPA1P20036 260 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 IDSP22304 550 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 CSF2RBP32927 897 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 CD68P34810 354 aaPredicted RBP9.24□□□□□ -0.93
YBX3-218ENST00000546298 ATP5OP48047 213 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 NAP1L1P55209 391 aaKnown RBP9.24□□□□□ -0.93
YBX3-218ENST00000546298 RAB15P59190 212 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 WASHC5Q12768 1159 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 MPP3Q13368 585 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 NFATC2Q13469 925 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 LLGL1Q15334 1064 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 TGIF1Q15583 401 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 INSCQ1MX18 579 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 DCAF12Q5T6F0 453 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 ITPRIPL1Q6GPH6 555 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 KDELC1Q6UW63 502 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 B4GALNT4Q76KP1 1039 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 ZNF605Q86T29 641 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 ZNF761Q86XN6 746 aaPredicted RBP9.24□□□□□ -0.93
YBX3-218ENST00000546298 FAM129CQ86XR2 697 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 DTX1Q86Y01 620 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 PLXDC1Q8IUK5 500 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 TRIM48Q8IWZ4 208 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 GDAP1Q8TB36 358 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 NCSTNQ92542 709 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 ART4Q93070 314 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 MED8Q96G25 268 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 MRFAP1L1Q96HT8 127 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 QKIQ96PU8 341 aaKnown RBP eCLIP9.24□□□□□ -0.93
YBX3-218ENST00000546298 VPS35Q96QK1 796 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 ZPBPQ9BS86 351 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 TIMM29Q9BSF4 260 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 FSD1LQ9BXM9 530 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 ZCCHC2Q9C0B9 1178 aaKnown RBP9.24□□□□□ -0.93
YBX3-218ENST00000546298 UCK1Q9HA47 277 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 PRDM8Q9NQV8 689 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 CPNE7Q9UBL6 633 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 RSPH14Q9UHP6 348 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 EFR3BQ9Y2G0 817 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 SPO11Q9Y5K1 396 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 ADGRG1Q9Y653 693 aa9.24□□□□□ -0.93
YBX3-218ENST00000546298 EPN1Q9Y6I3 576 aaPredicted RBP9.24□□□□□ -0.93
YBX3-218ENST00000546298 CCDC66A2RUB6 948 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 EFCAB7A8K855 629 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 PDZK1P1A8MUH7 402 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 NDUFA10O95299 355 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 EML2O95834 649 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 ITGB2P05107 769 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 SFTPCP11686 197 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 AMD1P17707 334 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 XRCC1P18887 633 aaPredicted RBP9.23□□□□□ -0.93
YBX3-218ENST00000546298 MPSTP25325 297 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 CTNNA2P26232 953 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 SPAM1P38567 509 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 MAPK9P45984 424 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 ZNF75DP51815 510 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 GEMP55040 296 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 ITGA9Q13797 1035 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 PRPSAP1Q14558 356 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 SNAP47Q5SQN1 464 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 LDLRAP1Q5SW96 308 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 ZNF648Q5T619 568 aaPredicted RBP9.23□□□□□ -0.93
YBX3-218ENST00000546298 KIAA1614Q5VZ46 1190 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 CRTC3Q6UUV7 619 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 PCSK4Q6UW60 755 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 WASH2PQ6VEQ5 465 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 TMEM26Q6ZUK4 368 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 ARHGAP22Q7Z5H3 698 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 CDKL3Q8IVW4 592 aaPredicted RBP9.23□□□□□ -0.93
YBX3-218ENST00000546298 RBM12BQ8IXT5 1001 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms