RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 SH3BP2P78314 561 aa12.38□□□□□ -0.43
COPS7A-221ENST00000546229 ITKQ08881 620 aa12.38□□□□□ -0.43
COPS7A-221ENST00000546229 GALNT3Q14435 633 aa12.38□□□□□ -0.43
COPS7A-221ENST00000546229 TMEM26Q6ZUK4 368 aa12.38□□□□□ -0.43
COPS7A-221ENST00000546229 PRSS42Q7Z5A4 293 aa12.38□□□□□ -0.43
COPS7A-221ENST00000546229 SLC9B2Q86UD5 537 aa12.38□□□□□ -0.43
COPS7A-221ENST00000546229 NDUFAF2Q8N183 169 aa12.38□□□□□ -0.43
COPS7A-221ENST00000546229 RAPGEF5Q92565 580 aa12.38□□□□□ -0.43
COPS7A-221ENST00000546229 RSC1A1Q92681 617 aa12.38□□□□□ -0.43
COPS7A-221ENST00000546229 MIB2Q96AX9 1013 aa12.38□□□□□ -0.43
COPS7A-221ENST00000546229 SH3KBP1Q96B97 665 aa12.38□□□□□ -0.43
COPS7A-221ENST00000546229 IMP4Q96G21 291 aaKnown RBP12.38□□□□□ -0.43
COPS7A-221ENST00000546229 ABHD17AQ96GS6 310 aa12.38□□□□□ -0.43
COPS7A-221ENST00000546229 AHCYL2Q96HN2 611 aaKnown RBP12.38□□□□□ -0.43
COPS7A-221ENST00000546229 GBP4Q96PP9 640 aa12.38□□□□□ -0.43
COPS7A-221ENST00000546229 PACSIN1Q9BY11 444 aa12.38□□□□□ -0.43
COPS7A-221ENST00000546229 ZNF768Q9H5H4 540 aaKnown RBP12.38□□□□□ -0.43
COPS7A-221ENST00000546229 PKD2L2Q9NZM6 624 aa12.38□□□□□ -0.43
COPS7A-221ENST00000546229 KCNMB2Q9Y691 235 aa12.38□□□□□ -0.43
COPS7A-221ENST00000546229 RPS6KL1Q9Y6S9 549 aa12.38□□□□□ -0.43
COPS7A-221ENST00000546229 OR5K4A6NMS3 321 aa12.37□□□□□ -0.43
COPS7A-221ENST00000546229 ZNF487B1APH4 448 aa12.37□□□□□ -0.43
COPS7A-221ENST00000546229 GPR89AB7ZAQ6 455 aa12.37□□□□□ -0.43
COPS7A-221ENST00000546229 MYO1FO00160 1098 aa12.37□□□□□ -0.43
COPS7A-221ENST00000546229 POLR1CO15160 346 aaPredicted RBP12.37□□□□□ -0.43
COPS7A-221ENST00000546229 TOX3O15405 576 aaPredicted RBP12.37□□□□□ -0.43
COPS7A-221ENST00000546229 SNX2O60749 519 aa12.37□□□□□ -0.43
COPS7A-221ENST00000546229 JCHAINP01591 159 aa12.37□□□□□ -0.43
COPS7A-221ENST00000546229 PIRTP0C851 137 aa12.37□□□□□ -0.43
COPS7A-221ENST00000546229 GPR89BP0CG08 455 aa12.37□□□□□ -0.43
COPS7A-221ENST00000546229 NR1D1P20393 614 aa12.37□□□□□ -0.43
COPS7A-221ENST00000546229 CAPZBP47756 277 aa12.37□□□□□ -0.43
COPS7A-221ENST00000546229 PDK2Q15119 407 aa12.37□□□□□ -0.43
COPS7A-221ENST00000546229 SLC14A2Q15849 920 aa12.37□□□□□ -0.43
COPS7A-221ENST00000546229 ASTE1Q2TB18 679 aaPredicted RBP12.37□□□□□ -0.43
COPS7A-221ENST00000546229 ZNF569Q5MCW4 686 aa12.37□□□□□ -0.43
COPS7A-221ENST00000546229 PDPK2PQ6A1A2 396 aa12.37□□□□□ -0.43
COPS7A-221ENST00000546229 SLC9A4Q6AI14 798 aa12.37□□□□□ -0.43
COPS7A-221ENST00000546229 ALKBH5Q6P6C2 394 aaKnown RBP12.37□□□□□ -0.43
COPS7A-221ENST00000546229 TMC3Q7Z5M5 1100 aa12.37□□□□□ -0.43
COPS7A-221ENST00000546229 PHYKPLQ8IUZ5 450 aa12.37□□□□□ -0.43
COPS7A-221ENST00000546229 CCDC13Q8IYE1 715 aa12.37□□□□□ -0.43
COPS7A-221ENST00000546229 TRAM1L1Q8N609 369 aa12.37□□□□□ -0.43
COPS7A-221ENST00000546229 ESX1Q8N693 406 aa12.37□□□□□ -0.43
COPS7A-221ENST00000546229 APOBEC4Q8WW27 367 aaKnown RBP12.37□□□□□ -0.43
COPS7A-221ENST00000546229 KLHL6Q8WZ60 621 aa12.37□□□□□ -0.43
COPS7A-221ENST00000546229 GLYATL1Q969I3 302 aa12.37□□□□□ -0.43
COPS7A-221ENST00000546229 RNF31Q96EP0 1072 aa12.37□□□□□ -0.43
COPS7A-221ENST00000546229 RNF157Q96PX1 679 aa12.37□□□□□ -0.43
COPS7A-221ENST00000546229 TIMM29Q9BSF4 260 aa12.37□□□□□ -0.43
COPS7A-221ENST00000546229 MLPHQ9BV36 600 aaPredicted RBP12.37□□□□□ -0.43
COPS7A-221ENST00000546229 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.37□□□□□ -0.43
COPS7A-221ENST00000546229 NAT10Q9H0A0 1025 aaKnown RBP12.37□□□□□ -0.43
COPS7A-221ENST00000546229 OR2AG1Q9H205 316 aa12.37□□□□□ -0.43
COPS7A-221ENST00000546229 TRIT1Q9H3H1 467 aaKnown RBP12.37□□□□□ -0.43
COPS7A-221ENST00000546229 ZNF71Q9NQZ8 489 aaPredicted RBP12.37□□□□□ -0.43
COPS7A-221ENST00000546229 KLC4Q9NSK0 619 aa12.37□□□□□ -0.43
COPS7A-221ENST00000546229 KLHL3Q9UH77 587 aa12.37□□□□□ -0.43
COPS7A-221ENST00000546229 CAPN11Q9UMQ6 739 aa12.37□□□□□ -0.43
COPS7A-221ENST00000546229 TTLL3Q9Y4R7 772 aa12.37□□□□□ -0.43
COPS7A-221ENST00000546229 SPO11Q9Y5K1 396 aa12.37□□□□□ -0.43
COPS7A-221ENST00000546229 BZW2Q9Y6E2 419 aaKnown RBP12.37□□□□□ -0.43
COPS7A-221ENST00000546229 PCSK5Q92824 1860 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 SMTNL1A8MU46 457 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 AURKAO14965 403 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 KIF1CO43896 1103 aaKnown RBP12.36□□□□□ -0.43
COPS7A-221ENST00000546229 TIAF1O95411 115 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 PDGFAP04085 211 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 FGF5P12034 268 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 SLC2A4P14672 509 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 BPIP17213 487 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 MX2P20592 715 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 CA4P22748 312 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 HNRNPH3P31942 346 aaKnown RBP12.36□□□□□ -0.43
COPS7A-221ENST00000546229 MAN1A1P33908 653 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 CA5AP35218 305 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 GJC1P36383 396 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 MAPK9P45984 424 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 PPP1CAP62136 330 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 ZBED6P86452 979 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 UBAP2LQ14157 1087 aaKnown RBP12.36□□□□□ -0.43
COPS7A-221ENST00000546229 DEFB109BQ30KR1 87 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 PLA2G4EQ3MJ16 856 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 FILIP1LQ4L180 1135 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 CCDC122Q5T0U0 273 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 AGAP9Q5VTM2 703 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 ALS2CLQ60I27 953 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 CRTC3Q6UUV7 619 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 ABRAXAS1Q6UWZ7 409 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 WASH2PQ6VEQ5 465 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 PLXDC1Q8IUK5 500 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 AVL9Q8NBF6 648 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 KIAA1143Q96AT1 154 aaPredicted RBP12.36□□□□□ -0.43
COPS7A-221ENST00000546229 ZSCAN5AQ9BUG6 496 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 EFHD1Q9BUP0 239 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 CEP41Q9BYV8 373 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 ZMYND15Q9H091 742 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 STN1Q9H668 368 aaKnown RBP12.36□□□□□ -0.43
COPS7A-221ENST00000546229 ZFYVE1Q9HBF4 777 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 MAGEE1Q9HCI5 957 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms