RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 HMCESQ96FZ2 354 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 IPPKQ9H8X2 491 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 EXD2Q9NVH0 621 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 CFAP97Q9P2B7 532 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 C2orf71A6NGG8 1288 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 GLUD1P00367 558 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 CTSEP14091 401 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 KELP23276 732 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 GABRR2P28476 465 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 KLHL12Q53G59 568 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 CXXC5Q7LFL8 322 aaKnown RBP12.44□□□□□ -0.42
COL4A6-209ENST00000545689 POMGNT2Q8NAT1 580 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 WDR48Q8TAF3 677 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 RASSF5Q8WWW0 418 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 AARSD1Q9BTE6 412 aaKnown RBP12.44□□□□□ -0.42
COL4A6-209ENST00000545689 BCO2Q9BYV7 579 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 MRPL39Q9NYK5 338 aaKnown RBP12.44□□□□□ -0.42
COL4A6-209ENST00000545689 GULP1Q9UBP9 304 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 ZNF487B1APH4 448 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 WWP2O00308 870 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 SNPHO15079 494 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 PRG2P13727 222 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 SP100P23497 879 aaPredicted RBP12.44□□□□□ -0.42
COL4A6-209ENST00000545689 CDH5P33151 784 aaPredicted RBP12.44□□□□□ -0.42
COL4A6-209ENST00000545689 BNC1Q01954 994 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 NOGQ13253 232 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 BIKQ13323 160 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 SH3D19Q5HYK7 790 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 PYROXD2Q8N2H3 581 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 EEF1AKMT1Q8WVE0 214 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 ZNF516Q92618 1163 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 OSBPL2Q9H1P3 480 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 TRIT1Q9H3H1 467 aaKnown RBP12.44□□□□□ -0.42
COL4A6-209ENST00000545689 FAM159BA6NKW6 160 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 BCKDKO14874 412 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 SLC28A2O43868 658 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 UGT2B17O75795 530 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 ADGRE1Q14246 886 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 CDCA2Q69YH5 1023 aaPredicted RBP12.43□□□□□ -0.42
COL4A6-209ENST00000545689 FSTL5Q8N475 847 aaPredicted RBP12.43□□□□□ -0.42
COL4A6-209ENST00000545689 TBATAQ96M53 351 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 PTGFRNQ9P2B2 879 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 WRAP73Q9P2S5 460 aaPredicted RBP12.43□□□□□ -0.42
COL4A6-209ENST00000545689 ZNF214Q9UL59 606 aaPredicted RBP12.43□□□□□ -0.42
COL4A6-209ENST00000545689 ASF1AQ9Y294 204 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 LYVE1Q9Y5Y7 322 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 TLL2Q9Y6L7 1015 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 FPGTO14772 594 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 FKTNO75072 461 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 TMEM63AO94886 807 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 CTNNB1P35222 781 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 PSMD4P55036 377 aaKnown RBP12.43□□□□□ -0.42
COL4A6-209ENST00000545689 KCNJ11Q14654 390 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 NDUFA5Q16718 116 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 TMEM110Q86TL2 294 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 RELL1Q8IUW5 271 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 FERD3LQ96RJ6 166 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 RGS10O43665 173 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 DBTP11182 482 aaKnown RBP12.43□□□□□ -0.42
COL4A6-209ENST00000545689 MTAPQ13126 283 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 CRYBG2Q8N1P7 616 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 ZNF513Q8N8E2 541 aaPredicted RBP12.43□□□□□ -0.42
COL4A6-209ENST00000545689 POC5Q8NA72 575 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 NETO2Q8NC67 525 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 TOP1MTQ969P6 601 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 POLR1DQ9Y2S0 133 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 GPSM3Q9Y4H4 160 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 AREL1O15033 823 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 VPS26BQ4G0F5 336 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 IL23RQ5VWK5 629 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 CES5AQ6NT32 575 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 SLC30A8Q8IWU4 369 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 CFAP52Q8N1V2 620 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 ARL10Q8N8L6 244 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 NAT14Q8WUY8 206 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 EVA1BQ9NVM1 165 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 SPATA2Q9UM82 520 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 TLR6Q9Y2C9 796 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 CACNB4O00305 520 aaPredicted RBP12.43□□□□□ -0.42
COL4A6-209ENST00000545689 LRATO95237 230 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 RALGDSQ12967 914 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 SRFBP1Q8NEF9 429 aaKnown RBP12.43□□□□□ -0.42
COL4A6-209ENST00000545689 CRISPLD1Q9H336 500 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 SLC45A1Q9Y2W3 748 aa12.43□□□□□ -0.42
COL4A6-209ENST00000545689 CHST10O43529 356 aa12.42□□□□□ -0.42
COL4A6-209ENST00000545689 NUDT14O95848 222 aa12.42□□□□□ -0.42
COL4A6-209ENST00000545689 IFNGP01579 166 aa12.42□□□□□ -0.42
COL4A6-209ENST00000545689 MANFP55145 182 aaKnown RBP12.42□□□□□ -0.42
COL4A6-209ENST00000545689 ZNF33AQ06730 810 aa12.42□□□□□ -0.42
COL4A6-209ENST00000545689 DPY19L1Q2PZI1 675 aa12.42□□□□□ -0.42
COL4A6-209ENST00000545689 KCTD21Q4G0X4 260 aa12.42□□□□□ -0.42
COL4A6-209ENST00000545689 ESRP1Q6NXG1 681 aaKnown RBP12.42□□□□□ -0.42
COL4A6-209ENST00000545689 NDRG1Q92597 394 aaKnown RBP12.42□□□□□ -0.42
COL4A6-209ENST00000545689 CIB1Q99828 191 aa12.42□□□□□ -0.42
COL4A6-209ENST00000545689 ZFP37Q9Y6Q3 630 aaPredicted RBP12.42□□□□□ -0.42
COL4A6-209ENST00000545689 ROBO1Q9Y6N7 1651 aa12.42□□□□□ -0.42
COL4A6-209ENST00000545689 SAGE2PA6NJ88 616 aa12.42□□□□□ -0.42
COL4A6-209ENST00000545689 FOXN2P32314 431 aa12.42□□□□□ -0.42
COL4A6-209ENST00000545689 RAB25P57735 213 aa12.42□□□□□ -0.42
COL4A6-209ENST00000545689 CCNYL2Q5T2Q4 361 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms