RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 ERI2A8K979 691 aaKnown RBP4.41□□□□□ -1.7
SNHG1-224ENST00000545688 FAM90A26D6RGX4 464 aa4.41□□□□□ -1.7
SNHG1-224ENST00000545688 PCDH7O60245 1069 aa4.41□□□□□ -1.7
SNHG1-224ENST00000545688 ZNF182P17025 639 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-224ENST00000545688 HOXC9P31274 260 aa4.41□□□□□ -1.7
SNHG1-224ENST00000545688 AHRP35869 848 aa4.41□□□□□ -1.7
SNHG1-224ENST00000545688 ARCN1P48444 511 aaKnown RBP4.41□□□□□ -1.7
SNHG1-224ENST00000545688 EIF3BP55884 814 aaKnown RBP4.41□□□□□ -1.7
SNHG1-224ENST00000545688 TBX2Q13207 712 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-224ENST00000545688 MAD2L1Q13257 205 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-224ENST00000545688 BIRC3Q13489 604 aa4.41□□□□□ -1.7
SNHG1-224ENST00000545688 MYLK3Q32MK0 819 aa4.41□□□□□ -1.7
SNHG1-224ENST00000545688 ZNF248Q8NDW4 579 aa4.41□□□□□ -1.7
SNHG1-224ENST00000545688 OR14L1PQ8NHC6 308 aa4.41□□□□□ -1.7
SNHG1-224ENST00000545688 NR1H4Q96RI1 486 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-224ENST00000545688 LRMDAQ9H2I8 198 aa4.41□□□□□ -1.7
SNHG1-224ENST00000545688 PRKRIP1Q9H875 184 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-224ENST00000545688 PCDHB16Q9NRJ7 776 aa4.41□□□□□ -1.7
SNHG1-224ENST00000545688 SAGE1Q9NXZ1 904 aa4.41□□□□□ -1.7
SNHG1-224ENST00000545688 LUZP4Q9P127 313 aa4.41□□□□□ -1.7
SNHG1-224ENST00000545688 KCNK7Q9Y2U2 307 aa4.41□□□□□ -1.7
SNHG1-224ENST00000545688 ADAMTSL3P82987 1691 aa4.41□□□□□ -1.7
SNHG1-224ENST00000545688 CACNA1FO60840 1977 aa4.4□□□□□ -1.7
SNHG1-224ENST00000545688 TP53BP1Q12888 1972 aaPredicted RBP4.4□□□□□ -1.7
SNHG1-224ENST00000545688 BIVM-ERCC5R4GMW8 1640 aa4.4□□□□□ -1.7
SNHG1-224ENST00000545688 OR5K3A6NET4 321 aa4.4□□□□□ -1.71
SNHG1-224ENST00000545688 M0QZ24 198 aa4.4□□□□□ -1.71
SNHG1-224ENST00000545688 ANKRD28O15084 1053 aa4.4□□□□□ -1.71
SNHG1-224ENST00000545688 NKX2-2O95096 273 aa4.4□□□□□ -1.71
SNHG1-224ENST00000545688 UGT1A1P22309 533 aa4.4□□□□□ -1.71
SNHG1-224ENST00000545688 MAPK9P45984 424 aa4.4□□□□□ -1.71
SNHG1-224ENST00000545688 ADAD2Q8NCV1 583 aaKnown RBP4.4□□□□□ -1.71
SNHG1-224ENST00000545688 RBM15BQ8NDT2 890 aaKnown RBP4.4□□□□□ -1.71
SNHG1-224ENST00000545688 HARBI1Q96MB7 349 aa4.4□□□□□ -1.71
SNHG1-224ENST00000545688 SLC52A3Q9NQ40 469 aa4.4□□□□□ -1.71
SNHG1-224ENST00000545688 TCP11L1Q9NUJ3 509 aa4.4□□□□□ -1.71
SNHG1-224ENST00000545688 GJD2Q9UKL4 321 aa4.4□□□□□ -1.71
SNHG1-224ENST00000545688 NAALADL1Q9UQQ1 740 aa4.4□□□□□ -1.71
SNHG1-224ENST00000545688 ARAP3Q8WWN8 1544 aa4.4□□□□□ -1.71
SNHG1-224ENST00000545688 PCF11O94913 1555 aaKnown RBP4.4□□□□□ -1.71
SNHG1-224ENST00000545688 A0A1W2PP11 408 aa4.39□□□□□ -1.71
SNHG1-224ENST00000545688 KRTAP9-6A8MVA2 160 aa4.39□□□□□ -1.71
SNHG1-224ENST00000545688 KCNN4O15554 427 aa4.39□□□□□ -1.71
SNHG1-224ENST00000545688 CIDEAO60543 219 aa4.39□□□□□ -1.71
SNHG1-224ENST00000545688 BAG4O95429 457 aaKnown RBP4.39□□□□□ -1.71
SNHG1-224ENST00000545688 ZNF23P17027 643 aa4.39□□□□□ -1.71
SNHG1-224ENST00000545688 UBA1P22314 1058 aaKnown RBP4.39□□□□□ -1.71
SNHG1-224ENST00000545688 EPHA8P29322 1005 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-224ENST00000545688 HARS2P49590 506 aaKnown RBP4.39□□□□□ -1.71
SNHG1-224ENST00000545688 OLIG2Q13516 323 aa4.39□□□□□ -1.71
SNHG1-224ENST00000545688 DCTN2Q13561 401 aaKnown RBP4.39□□□□□ -1.71
SNHG1-224ENST00000545688 CDONQ4KMG0 1287 aa4.39□□□□□ -1.71
SNHG1-224ENST00000545688 KRTCAP3Q53RY4 240 aa4.39□□□□□ -1.71
SNHG1-224ENST00000545688 CDC73Q6P1J9 531 aa4.39□□□□□ -1.71
SNHG1-224ENST00000545688 PAPD4Q6PIY7 484 aaKnown RBP4.39□□□□□ -1.71
SNHG1-224ENST00000545688 TSSK4Q6SA08 328 aa4.39□□□□□ -1.71
SNHG1-224ENST00000545688 C15orf39Q6ZRI6 1047 aa4.39□□□□□ -1.71
SNHG1-224ENST00000545688 PLEKHM3Q6ZWE6 761 aa4.39□□□□□ -1.71
SNHG1-224ENST00000545688 ATG9AQ7Z3C6 839 aa4.39□□□□□ -1.71
SNHG1-224ENST00000545688 TRPT1Q86TN4 253 aaKnown RBP4.39□□□□□ -1.71
SNHG1-224ENST00000545688 MYPOPQ86VE0 399 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-224ENST00000545688 APLFQ8IW19 511 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-224ENST00000545688 FCAMRQ8WWV6 532 aa4.39□□□□□ -1.71
SNHG1-224ENST00000545688 PHF21AQ96BD5 680 aa4.39□□□□□ -1.71
SNHG1-224ENST00000545688 KDM3AQ9Y4C1 1321 aa4.39□□□□□ -1.71
SNHG1-224ENST00000545688 DISP1Q96F81 1524 aa4.38□□□□□ -1.71
SNHG1-224ENST00000545688 C5orf60A6NFR6 353 aa4.38□□□□□ -1.71
SNHG1-224ENST00000545688 EIF3CLB5ME19 914 aaKnown RBP4.38□□□□□ -1.71
SNHG1-224ENST00000545688 TMEM178BH3BS89 294 aa4.38□□□□□ -1.71
SNHG1-224ENST00000545688 PYGLP06737 847 aa4.38□□□□□ -1.71
SNHG1-224ENST00000545688 CSF2RAP15509 400 aa4.38□□□□□ -1.71
SNHG1-224ENST00000545688 CHRNB4P30926 498 aa4.38□□□□□ -1.71
SNHG1-224ENST00000545688 TUBP50607 506 aa4.38□□□□□ -1.71
SNHG1-224ENST00000545688 GNB1P62873 340 aa4.38□□□□□ -1.71
SNHG1-224ENST00000545688 TECRLQ5HYJ1 363 aa4.38□□□□□ -1.71
SNHG1-224ENST00000545688 ZNF772Q68DY9 489 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-224ENST00000545688 ZNF497Q6ZNH5 498 aa4.38□□□□□ -1.71
SNHG1-224ENST00000545688 ANO5Q75V66 913 aa4.38□□□□□ -1.71
SNHG1-224ENST00000545688 NOTCH2NLQ7Z3S9 236 aa4.38□□□□□ -1.71
SNHG1-224ENST00000545688 PIWIL4Q7Z3Z4 852 aaKnown RBP4.38□□□□□ -1.71
SNHG1-224ENST00000545688 TRIM58Q8NG06 486 aa4.38□□□□□ -1.71
SNHG1-224ENST00000545688 DNAAF4Q8WXU2 420 aa4.38□□□□□ -1.71
SNHG1-224ENST00000545688 TMEM68Q96MH6 324 aa4.38□□□□□ -1.71
SNHG1-224ENST00000545688 KLHL9Q9P2J3 617 aa4.38□□□□□ -1.71
SNHG1-224ENST00000545688 OR14J1Q9UGF5 321 aa4.38□□□□□ -1.71
SNHG1-224ENST00000545688 ARHGAP26Q9UNA1 814 aa4.38□□□□□ -1.71
SNHG1-224ENST00000545688 CD109Q6YHK3 1445 aa4.38□□□□□ -1.71
SNHG1-224ENST00000545688 C1orf226A1L170 272 aa4.37□□□□□ -1.71
SNHG1-224ENST00000545688 MLYCDO95822 493 aa4.37□□□□□ -1.71
SNHG1-224ENST00000545688 ERVK-10P10266 1014 aa4.37□□□□□ -1.71
SNHG1-224ENST00000545688 PPM1FP49593 454 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-224ENST00000545688 DRG2P55039 364 aaKnown RBP4.37□□□□□ -1.71
SNHG1-224ENST00000545688 ACVR2BQ13705 512 aa4.37□□□□□ -1.71
SNHG1-224ENST00000545688 ZC2HC1BQ5TFG8 222 aa4.37□□□□□ -1.71
SNHG1-224ENST00000545688 LCN10Q6JVE6 187 aa4.37□□□□□ -1.71
SNHG1-224ENST00000545688 GSTA5Q7RTV2 222 aa4.37□□□□□ -1.71
SNHG1-224ENST00000545688 HEATR4Q86WZ0 1026 aa4.37□□□□□ -1.71
SNHG1-224ENST00000545688 ZNF354CQ86Y25 554 aa4.37□□□□□ -1.71
SNHG1-224ENST00000545688 CNTROBQ8N137 903 aa4.37□□□□□ -1.71
SNHG1-224ENST00000545688 ARHGEF26Q96DR7 871 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms