RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, human

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-223	ENST00000545440	TMEM151A	Q8N4L1	468 aa		7.67	□□□□□ -1.18
SNHG1-223	ENST00000545440	PLD5	Q8N7P1	536 aa		7.67	□□□□□ -1.18
SNHG1-223	ENST00000545440	MDM1	Q8TC05	714 aa		7.67	□□□□□ -1.18
SNHG1-223	ENST00000545440	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	7.67	□□□□□ -1.18
SNHG1-223	ENST00000545440	LMX1A	Q8TE12	382 aa		7.67	□□□□□ -1.18
SNHG1-223	ENST00000545440	RAPGEF5	Q92565	580 aa		7.67	□□□□□ -1.18
SNHG1-223	ENST00000545440	NAT6	Q93015	286 aa		7.67	□□□□□ -1.18
SNHG1-223	ENST00000545440	NUS1	Q96E22	293 aa		7.67	□□□□□ -1.18
SNHG1-223	ENST00000545440	DTD2	Q96FN9	168 aa		7.67	□□□□□ -1.18
SNHG1-223	ENST00000545440	SCRN2	Q96FV2	425 aa		7.67	□□□□□ -1.18
SNHG1-223	ENST00000545440	PDXP	Q96GD0	296 aa		7.67	□□□□□ -1.18
SNHG1-223	ENST00000545440	COX4I2	Q96KJ9	171 aa		7.67	□□□□□ -1.18
SNHG1-223	ENST00000545440	COQ10A	Q96MF6	247 aa		7.67	□□□□□ -1.18
SNHG1-223	ENST00000545440	OLFM3	Q96PB7	478 aa		7.67	□□□□□ -1.18
SNHG1-223	ENST00000545440	RNF157	Q96PX1	679 aa		7.67	□□□□□ -1.18
SNHG1-223	ENST00000545440	MIPEP	Q99797	713 aa		7.67	□□□□□ -1.18
SNHG1-223	ENST00000545440	DPH2	Q9BQC3	489 aa	Predicted RBP	7.67	□□□□□ -1.18
SNHG1-223	ENST00000545440	APOO	Q9BUR5	198 aa		7.67	□□□□□ -1.18
SNHG1-223	ENST00000545440	TDRD1	Q9BXT4	1180 aa	Known RBP	7.67	□□□□□ -1.18
SNHG1-223	ENST00000545440	TCEAL2	Q9H3H9	227 aa	Predicted RBP	7.67	□□□□□ -1.18
SNHG1-223	ENST00000545440	WDR26	Q9H7D7	661 aa		7.67	□□□□□ -1.18
SNHG1-223	ENST00000545440	CAAP1	Q9H8G2	361 aa		7.67	□□□□□ -1.18
SNHG1-223	ENST00000545440	NT5M	Q9NPB1	228 aa		7.67	□□□□□ -1.18
SNHG1-223	ENST00000545440	LUC7L	Q9NQ29	371 aa	Known RBP	7.67	□□□□□ -1.18
SNHG1-223	ENST00000545440	DDX56	Q9NY93	547 aa	Known RBP	7.67	□□□□□ -1.18
SNHG1-223	ENST00000545440	DTL	Q9NZJ0	730 aa		7.67	□□□□□ -1.18
SNHG1-223	ENST00000545440	KL	Q9UEF7	1012 aa		7.67	□□□□□ -1.18
SNHG1-223	ENST00000545440	DNPEP	Q9ULA0	475 aa		7.67	□□□□□ -1.18
SNHG1-223	ENST00000545440	PPIL1	Q9Y3C6	166 aa		7.67	□□□□□ -1.18
SNHG1-223	ENST00000545440	OR1A2	Q9Y585	309 aa		7.67	□□□□□ -1.18
SNHG1-223	ENST00000545440	RAI2	Q9Y5P3	530 aa		7.67	□□□□□ -1.18
SNHG1-223	ENST00000545440		A0A0J9YYE9	177 aa		7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	EME2	A4GXA9	379 aa	Predicted RBP	7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	TRABD2B	A6NFA1	517 aa		7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	CAPN8	A6NHC0	703 aa		7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	TAF4	O00268	1085 aa		7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	APOL1	O14791	398 aa		7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	PPP1R12A	O14974	1030 aa	Predicted RBP	7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	SPOP	O43791	374 aa		7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	GCAT	O75600	419 aa		7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	TRBC1	P01850	177 aa		7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	KRT1	P04264	644 aa		7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	HLA-DQB2	P05538	268 aa		7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	ANXA6	P08133	673 aa		7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	ZFX	P17010	805 aa	Predicted RBP	7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	ZNF30	P17039	623 aa		7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	TEAD1	P28347	426 aa		7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	TRIM23	P36406	574 aa		7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	CHRNA4	P43681	627 aa		7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	SRP54	P61011	504 aa	Known RBP	7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	RPL26	P61254	145 aa	Known RBP	7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	IFI35	P80217	286 aa	Predicted RBP	7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	DSC2	Q02487	901 aa		7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	ITK	Q08881	620 aa		7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	SLC10A2	Q12908	348 aa	Predicted RBP	7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	ARHGEF7	Q14155	803 aa		7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	RTP5	Q14D33	572 aa		7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	NR0B2	Q15466	257 aa		7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	LETMD1	Q6P1Q0	360 aa		7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	PNCK	Q6P2M8	343 aa		7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	ENPP7	Q6UWV6	458 aa		7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	UNC5A	Q6ZN44	842 aa		7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	MARCH9	Q86YJ5	346 aa		7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	SLC35F3	Q8IY50	421 aa		7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	RAVER1	Q8IY67	606 aa	Known RBP	7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	CCDC170	Q8IYT3	715 aa		7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	ARL10	Q8N8L6	244 aa		7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	PLA2G15	Q8NCC3	412 aa		7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	OR56A4	Q8NGH8	313 aa		7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	ARRDC2	Q8TBH0	407 aa		7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	IFI44	Q8TCB0	444 aa		7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	PIH1D2	Q8WWB5	315 aa		7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	FUBP1	Q96AE4	644 aa	Known RBP	7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	DEPDC7	Q96QD5	511 aa		7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	SRPK1	Q96SB4	655 aa	Known RBP	7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	RBM15	Q96T37	977 aa	Known RBP eCLIP	7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	TEX101	Q9BY14	249 aa		7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	CLPB	Q9H078	707 aa		7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	FGF22	Q9HCT0	170 aa		7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	PHPT1	Q9NRX4	125 aa	Predicted RBP	7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	RBM22	Q9NW64	420 aa	Known RBP eCLIP	7.66	□□□□□ -1.18	1e-8	■■■□□ 18.1
SNHG1-223	ENST00000545440	RPL26L1	Q9UNX3	145 aa	Known RBP	7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	TTLL3	Q9Y4R7	772 aa		7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	ZZEF1	O43149	2961 aa		7.66	□□□□□ -1.18
SNHG1-223	ENST00000545440	CHD6	Q8TD26	2715 aa		7.65	□□□□□ -1.18
SNHG1-223	ENST00000545440		A0A0A6YYK5	440 aa	Predicted RBP	7.65	□□□□□ -1.18
SNHG1-223	ENST00000545440		A8MX80	341 aa		7.65	□□□□□ -1.18
SNHG1-223	ENST00000545440	YY2	O15391	372 aa		7.65	□□□□□ -1.18
SNHG1-223	ENST00000545440	OPA1	O60313	960 aa		7.65	□□□□□ -1.18
SNHG1-223	ENST00000545440	TCEA3	O75764	348 aa		7.65	□□□□□ -1.18
SNHG1-223	ENST00000545440	MT-CO3	P00414	261 aa		7.65	□□□□□ -1.18
SNHG1-223	ENST00000545440	TNF	P01375	233 aa		7.65	□□□□□ -1.18
SNHG1-223	ENST00000545440	PYGL	P06737	847 aa		7.65	□□□□□ -1.18
SNHG1-223	ENST00000545440	PDHA1	P08559	390 aa		7.65	□□□□□ -1.18
SNHG1-223	ENST00000545440	CTSE	P14091	401 aa		7.65	□□□□□ -1.18
SNHG1-223	ENST00000545440	COMT	P21964	271 aa		7.65	□□□□□ -1.18
SNHG1-223	ENST00000545440	NTF4	P34130	210 aa		7.65	□□□□□ -1.18
SNHG1-223	ENST00000545440	CYLC1	P35663	651 aa	Predicted RBP	7.65	□□□□□ -1.18
SNHG1-223	ENST00000545440	ZNF75D	P51815	510 aa		7.65	□□□□□ -1.18
SNHG1-223	ENST00000545440	EPHB1	P54762	984 aa		7.65	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms