RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, human

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-222	ENST00000545308	SUSD1	Q6UWL2	747 aa		4.13	□□□□□ -1.75
SNHG1-222	ENST00000545308	TRIL	Q7L0X0	811 aa		4.13	□□□□□ -1.75
SNHG1-222	ENST00000545308	DPPA4	Q7L190	304 aa		4.13	□□□□□ -1.75
SNHG1-222	ENST00000545308	CCDC186	Q7Z3E2	898 aa		4.13	□□□□□ -1.75
SNHG1-222	ENST00000545308	GLRX5	Q86SX6	157 aa		4.13	□□□□□ -1.75
SNHG1-222	ENST00000545308	FAM217A	Q8IXS0	508 aa		4.13	□□□□□ -1.75
SNHG1-222	ENST00000545308	THNSL1	Q8IYQ7	743 aa		4.13	□□□□□ -1.75
SNHG1-222	ENST00000545308	RBFA	Q8N0V3	343 aa		4.13	□□□□□ -1.75
SNHG1-222	ENST00000545308	OR8K5	Q8NH50	307 aa		4.13	□□□□□ -1.75
SNHG1-222	ENST00000545308	CEP76	Q8TAP6	659 aa		4.13	□□□□□ -1.75
SNHG1-222	ENST00000545308	DPF1	Q92782	380 aa		4.13	□□□□□ -1.75
SNHG1-222	ENST00000545308	FER1L6-AS2	Q96M78	137 aa		4.13	□□□□□ -1.75
SNHG1-222	ENST00000545308	ACOX2	Q99424	681 aa		4.13	□□□□□ -1.75
SNHG1-222	ENST00000545308	GPATCH1	Q9BRR8	931 aa	Known RBP	4.13	□□□□□ -1.75
SNHG1-222	ENST00000545308	MSTO1	Q9BUK6	570 aa		4.13	□□□□□ -1.75
SNHG1-222	ENST00000545308	MKKS	Q9NPJ1	570 aa	Predicted RBP	4.13	□□□□□ -1.75
SNHG1-222	ENST00000545308	PSD3	Q9NYI0	1048 aa		4.13	□□□□□ -1.75
SNHG1-222	ENST00000545308	CWC15	Q9P013	229 aa	Known RBP	4.13	□□□□□ -1.75
SNHG1-222	ENST00000545308	KLHL13	Q9P2N7	655 aa		4.13	□□□□□ -1.75
SNHG1-222	ENST00000545308	AGO2	Q9UKV8	859 aa	Known RBP	4.13	□□□□□ -1.75
SNHG1-222	ENST00000545308	SLC4A4	Q9Y6R1	1079 aa		4.13	□□□□□ -1.75
SNHG1-222	ENST00000545308	UTRN	P46939	3433 aa		4.13	□□□□□ -1.75
SNHG1-222	ENST00000545308	OVOS2	A0A0G2JMS6	1433 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	OVOS2	A0A0J9YW53	1432 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	OVOS2	Q6IE36	1432 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	NRXN1	Q9ULB1	1477 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	PPL	O60437	1756 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308		A0A1W2PPC1	479 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	TCRBV21S2A2	A0A5A6	115 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	WDR91	A4D1P6	747 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308		A6NL46	340 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308		A6NNC1	897 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308		F8W810	466 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	DIAPH2	O60879	1101 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	TADA2A	O75478	443 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	TOMM70	O94826	608 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	TGDS	O95455	350 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	CELA2A	P08217	269 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	CYC1	P08574	325 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	ACTN1	P12814	892 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	MCC	P23508	829 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	MC5R	P33032	325 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	PPP3CC	P48454	512 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	MMP14	P50281	582 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	GPR143	P51810	404 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	TMF1	P82094	1093 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	MRPS34	P82930	218 aa	Known RBP	4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	RBP5	P82980	135 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	SPOCK1	Q08629	439 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	ASIC2	Q16515	512 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	SLC10A5	Q5PT55	438 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	TRAT1	Q6PIZ9	186 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	ZNF782	Q6ZMW2	699 aa	Predicted RBP	4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	ZNF66	Q6ZN08	573 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	PQLC2	Q6ZP29	291 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	RBPMS2	Q6ZRY4	209 aa	Known RBP	4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	MTSS1L	Q765P7	747 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	CHST3	Q7LGC8	479 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	HACE1	Q8IYU2	909 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	GUF1	Q8N442	669 aa	Known RBP	4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	ZNF713	Q8N859	430 aa	Predicted RBP	4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	XXYLT1	Q8NBI6	393 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	GSDMB	Q8TAX9	411 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	GPT2	Q8TD30	523 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	TRPC4AP	Q8TEL6	797 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	HASPIN	Q8TF76	798 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	NSMCE1	Q8WV22	266 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	ERGIC1	Q969X5	290 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	TMEM18	Q96B42	140 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	PTER	Q96BW5	349 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	MSI2	Q96DH6	328 aa	Known RBP	4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	LINC00615	Q96LM1	132 aa	Predicted RBP	4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	ZNF570	Q96NI8	536 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	CDRT15	Q96T59	188 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	WDR83	Q9BRX9	315 aa	Known RBP	4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	NAA11	Q9BSU3	229 aa	Predicted RBP	4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	KCNN2	Q9H2S1	579 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	PIGM	Q9H3S5	423 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	DENND2D	Q9H6A0	471 aa	Predicted RBP	4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	ESRP2	Q9H6T0	727 aa	Known RBP	4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	THSD1	Q9NS62	852 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	CYSLTR2	Q9NS75	346 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	ABCF3	Q9NUQ8	709 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	TMEM45A	Q9NWC5	275 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	CISD1	Q9NZ45	108 aa	Known RBP	4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	GTF3C4	Q9UKN8	822 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	ERVK-11	Q9UQG0	969 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	WBP11	Q9Y2W2	641 aa	Known RBP	4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	WDR17	Q8IZU2	1322 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	IFT172	Q9UG01	1749 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	TECPR2	O15040	1411 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	ANKAR	Q7Z5J8	1434 aa		4.12	□□□□□ -1.75
SNHG1-222	ENST00000545308	NRK	Q7Z2Y5	1582 aa		4.11	□□□□□ -1.75
SNHG1-222	ENST00000545308	MANSC4	A6NHS7	340 aa	Predicted RBP	4.11	□□□□□ -1.75
SNHG1-222	ENST00000545308	PI4K2B	G5E9Z4	385 aa		4.11	□□□□□ -1.75
SNHG1-222	ENST00000545308		H0Y626	953 aa		4.11	□□□□□ -1.75
SNHG1-222	ENST00000545308	STMND1	H3BQB6	276 aa		4.11	□□□□□ -1.75
SNHG1-222	ENST00000545308	PRPF4	O43172	522 aa	Known RBP eCLIP	4.11	□□□□□ -1.75
SNHG1-222	ENST00000545308	GPC4	O75487	556 aa		4.11	□□□□□ -1.75
SNHG1-222	ENST00000545308	DAB1	O75553	588 aa		4.11	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms