RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 ANKRD34CP0C6C1 535 aa13.94□□□□□ -0.18
DDX11-228ENST00000545115 XRCC1P18887 633 aaPredicted RBP13.94□□□□□ -0.18
DDX11-228ENST00000545115 NOP2P46087 812 aaKnown RBP13.94□□□□□ -0.18
DDX11-228ENST00000545115 UBE2IP63279 158 aaKnown RBP13.94□□□□□ -0.18
DDX11-228ENST00000545115 ABHD18Q0P651 414 aa13.94□□□□□ -0.18
DDX11-228ENST00000545115 AP1B1Q10567 949 aa13.94□□□□□ -0.18
DDX11-228ENST00000545115 KCNAB2Q13303 367 aa13.94□□□□□ -0.18
DDX11-228ENST00000545115 INSCQ1MX18 579 aa13.94□□□□□ -0.18
DDX11-228ENST00000545115 ALS2CLQ60I27 953 aa13.94□□□□□ -0.18
DDX11-228ENST00000545115 PDPK2PQ6A1A2 396 aa13.94□□□□□ -0.18
DDX11-228ENST00000545115 SLC9A4Q6AI14 798 aa13.94□□□□□ -0.18
DDX11-228ENST00000545115 NT5DC3Q86UY8 548 aa13.94□□□□□ -0.18
DDX11-228ENST00000545115 VSIG1Q86XK7 387 aa13.94□□□□□ -0.18
DDX11-228ENST00000545115 PLXDC1Q8IUK5 500 aa13.94□□□□□ -0.18
DDX11-228ENST00000545115 TRAM1L1Q8N609 369 aa13.94□□□□□ -0.18
DDX11-228ENST00000545115 GPR26Q8NDV2 337 aa13.94□□□□□ -0.18
DDX11-228ENST00000545115 PLEKHG4BQ96PX9 1271 aa13.94□□□□□ -0.18
DDX11-228ENST00000545115 TBC1D10AQ9BXI6 508 aa13.94□□□□□ -0.18
DDX11-228ENST00000545115 TRIT1Q9H3H1 467 aaKnown RBP13.94□□□□□ -0.18
DDX11-228ENST00000545115 UCK1Q9HA47 277 aa13.94□□□□□ -0.18
DDX11-228ENST00000545115 MAGEE1Q9HCI5 957 aa13.94□□□□□ -0.18
DDX11-228ENST00000545115 TRIM39Q9HCM9 518 aa13.94□□□□□ -0.18
DDX11-228ENST00000545115 APMAPQ9HDC9 416 aa13.94□□□□□ -0.18
DDX11-228ENST00000545115 ARFGAP3Q9NP61 516 aa13.94□□□□□ -0.18
DDX11-228ENST00000545115 SHOC2Q9UQ13 582 aa13.94□□□□□ -0.18
DDX11-228ENST00000545115 TMEM184BQ9Y519 407 aaPredicted RBP13.94□□□□□ -0.18
DDX11-228ENST00000545115 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.94□□□□□ -0.18
DDX11-228ENST00000545115 LOC101059948A0A1B0GTJ6 334 aa13.93□□□□□ -0.18
DDX11-228ENST00000545115 APOL1O14791 398 aa13.93□□□□□ -0.18
DDX11-228ENST00000545115 PPP1R12AO14974 1030 aaPredicted RBP13.93□□□□□ -0.18
DDX11-228ENST00000545115 CHUKO15111 745 aa13.93□□□□□ -0.18
DDX11-228ENST00000545115 POLR1CO15160 346 aaPredicted RBP13.93□□□□□ -0.18
DDX11-228ENST00000545115 DLGAP3O95886 979 aa13.93□□□□□ -0.18
DDX11-228ENST00000545115 SLC4A1P02730 911 aa13.93□□□□□ -0.18
DDX11-228ENST00000545115 TPM3P06753 285 aa13.93□□□□□ -0.18
DDX11-228ENST00000545115 TMEM253P0C7T8 217 aa13.93□□□□□ -0.18
DDX11-228ENST00000545115 PIRTP0C851 137 aa13.93□□□□□ -0.18
DDX11-228ENST00000545115 CDC20Q12834 499 aa13.93□□□□□ -0.18
DDX11-228ENST00000545115 MESDQ14696 234 aa13.93□□□□□ -0.18
DDX11-228ENST00000545115 PDK1Q15118 436 aa13.93□□□□□ -0.18
DDX11-228ENST00000545115 ZNF648Q5T619 568 aaPredicted RBP13.93□□□□□ -0.18
DDX11-228ENST00000545115 CRTC3Q6UUV7 619 aa13.93□□□□□ -0.18
DDX11-228ENST00000545115 TIPARPQ7Z3E1 657 aaKnown RBP13.93□□□□□ -0.18
DDX11-228ENST00000545115 KDELC2Q7Z4H8 507 aa13.93□□□□□ -0.18
DDX11-228ENST00000545115 TMC3Q7Z5M5 1100 aa13.93□□□□□ -0.18
DDX11-228ENST00000545115 GLYATL1Q969I3 302 aa13.93□□□□□ -0.18
DDX11-228ENST00000545115 IMP4Q96G21 291 aaKnown RBP13.93□□□□□ -0.18
DDX11-228ENST00000545115 AGAP3Q96P47 875 aa13.93□□□□□ -0.18
DDX11-228ENST00000545115 OLFM3Q96PB7 478 aa13.93□□□□□ -0.18
DDX11-228ENST00000545115 CEP41Q9BYV8 373 aa13.93□□□□□ -0.18
DDX11-228ENST00000545115 GPR63Q9BZJ6 419 aa13.93□□□□□ -0.18
DDX11-228ENST00000545115 DEF6Q9H4E7 631 aa13.93□□□□□ -0.18
DDX11-228ENST00000545115 SIDT1Q9NXL6 827 aaKnown RBP13.93□□□□□ -0.18
DDX11-228ENST00000545115 ZNF711Q9Y462 761 aa13.93□□□□□ -0.18
DDX11-228ENST00000545115 C3orf70A6NLC5 250 aaPredicted RBP13.92□□□□□ -0.18
DDX11-228ENST00000545115 NKX2-8O15522 239 aa13.92□□□□□ -0.18
DDX11-228ENST00000545115 VIPP01282 170 aa13.92□□□□□ -0.18
DDX11-228ENST00000545115 C9P02748 559 aa13.92□□□□□ -0.18
DDX11-228ENST00000545115 PRKAR1AP10644 381 aa13.92□□□□□ -0.18
DDX11-228ENST00000545115 GFERP55789 205 aa13.92□□□□□ -0.18
DDX11-228ENST00000545115 MC1RQ01726 317 aa13.92□□□□□ -0.18
DDX11-228ENST00000545115 TLE1Q04724 770 aa13.92□□□□□ -0.18
DDX11-228ENST00000545115 CDK18Q07002 472 aa13.92□□□□□ -0.18
DDX11-228ENST00000545115 MAP7Q14244 749 aa13.92□□□□□ -0.18
DDX11-228ENST00000545115 SLC14A2Q15849 920 aa13.92□□□□□ -0.18
DDX11-228ENST00000545115 PCSK7Q16549 785 aa13.92□□□□□ -0.18
DDX11-228ENST00000545115 ASTE1Q2TB18 679 aaPredicted RBP13.92□□□□□ -0.18
DDX11-228ENST00000545115 PLA2G4EQ3MJ16 856 aa13.92□□□□□ -0.18
DDX11-228ENST00000545115 TMEM26Q6ZUK4 368 aa13.92□□□□□ -0.18
DDX11-228ENST00000545115 ADGRG6Q86SQ4 1221 aa13.92□□□□□ -0.18
DDX11-228ENST00000545115 LRRTM4Q86VH4 590 aa13.92□□□□□ -0.18
DDX11-228ENST00000545115 TRIM48Q8IWZ4 208 aa13.92□□□□□ -0.18
DDX11-228ENST00000545115 UNC5BQ8IZJ1 945 aa13.92□□□□□ -0.18
DDX11-228ENST00000545115 ESX1Q8N693 406 aa13.92□□□□□ -0.18
DDX11-228ENST00000545115 STARD8Q92502 1023 aa13.92□□□□□ -0.18
DDX11-228ENST00000545115 C9orf72Q96LT7 481 aa13.92□□□□□ -0.18
DDX11-228ENST00000545115 TIMM29Q9BSF4 260 aa13.92□□□□□ -0.18
DDX11-228ENST00000545115 MAK16Q9BXY0 300 aaKnown RBP13.92□□□□□ -0.18
DDX11-228ENST00000545115 SLC25A51Q9H1U9 297 aa13.92□□□□□ -0.18
DDX11-228ENST00000545115 POT1Q9NUX5 634 aa13.92□□□□□ -0.18
DDX11-228ENST00000545115 SCHIP1Q9P0W5 487 aaPredicted RBP13.92□□□□□ -0.18
DDX11-228ENST00000545115 SSU72P8A0A1W2PR75 194 aa13.91□□□□□ -0.18
DDX11-228ENST00000545115 PDZK1P1A8MUH7 402 aa13.91□□□□□ -0.18
DDX11-228ENST00000545115 KMOO15229 486 aa13.91□□□□□ -0.18
DDX11-228ENST00000545115 TOX3O15405 576 aaPredicted RBP13.91□□□□□ -0.18
DDX11-228ENST00000545115 VEGFDO43915 354 aa13.91□□□□□ -0.18
DDX11-228ENST00000545115 UBXN7O94888 489 aa13.91□□□□□ -0.18
DDX11-228ENST00000545115 ZFXP17010 805 aaPredicted RBP13.91□□□□□ -0.18
DDX11-228ENST00000545115 ZNF7P17097 686 aaPredicted RBP13.91□□□□□ -0.18
DDX11-228ENST00000545115 SLC19A1P41440 591 aa13.91□□□□□ -0.18
DDX11-228ENST00000545115 STAT5AP42229 794 aa13.91□□□□□ -0.18
DDX11-228ENST00000545115 ARHGAP25P42331 645 aa13.91□□□□□ -0.18
DDX11-228ENST00000545115 SEPT7Q16181 437 aaKnown RBP13.91□□□□□ -0.18
DDX11-228ENST00000545115 CRTC2Q53ET0 693 aaPredicted RBP13.91□□□□□ -0.18
DDX11-228ENST00000545115 FAM182AQ5T1J6 154 aa13.91□□□□□ -0.18
DDX11-228ENST00000545115 CCDC70Q6NSX1 233 aa13.91□□□□□ -0.18
DDX11-228ENST00000545115 PTRH1Q86Y79 214 aaKnown RBP13.91□□□□□ -0.18
DDX11-228ENST00000545115 C9orf43Q8TAL5 461 aaPredicted RBP13.91□□□□□ -0.18
DDX11-228ENST00000545115 SLC35G2Q8TBE7 412 aa13.91□□□□□ -0.18
DDX11-228ENST00000545115 TADA1Q96BN2 335 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms