RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 OR51B4Q9Y5P0 310 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 KLF2Q9Y5W3 355 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-220ENST00000544550 ZFC3H1O60293 1989 aaKnown RBP4.09□□□□□ -1.76
SNHG1-220ENST00000544550 C2CD3Q4AC94 2353 aa4.09□□□□□ -1.76
SNHG1-220ENST00000544550 BOD1L1Q8NFC6 3051 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 IGHV1OR21-1A0A087WYE8 117 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 PIPSLA2A3N6 862 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 C21orf140B9A014 251 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 K7ERQ8 282 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 AREL1O15033 823 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 GSTA4O15217 222 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 SMAD6O43541 496 aaKnown RBP4.08□□□□□ -1.76
SNHG1-220ENST00000544550 CALUO43852 315 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-220ENST00000544550 STX10O60499 249 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 PPP6R2O75170 966 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 KATNA1O75449 491 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 CREG1O75629 220 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 TRUB2O95900 331 aaKnown RBP4.08□□□□□ -1.76
SNHG1-220ENST00000544550 MT-CO1P00395 513 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 MT-ND3P03897 115 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 RNASE1P07998 156 aaKnown RBP4.08□□□□□ -1.76
SNHG1-220ENST00000544550 MSL3P1P0C860 447 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 COX6B1P14854 86 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 CD19P15391 556 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 FPR2P25090 351 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 NFKBIAP25963 317 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 GJB2P29033 226 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 SSTR2P30874 369 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 CASP14P31944 242 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 GTF2H1P32780 548 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 ACADSBP45954 432 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 GCLMP48507 274 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 PPM1FP49593 454 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-220ENST00000544550 SERPINH1P50454 418 aaKnown RBP4.08□□□□□ -1.76
SNHG1-220ENST00000544550 SUOXP51687 545 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 VAMP7P51809 220 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 CCNHP51946 323 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-220ENST00000544550 ITGA1P56199 1179 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 GEMIN4P57678 1058 aaKnown RBP4.08□□□□□ -1.76
SNHG1-220ENST00000544550 KIAA1024LP59773 190 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 IRX6P78412 446 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-220ENST00000544550 MVKQ03426 396 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 RAD51Q06609 339 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 CDK18Q07002 472 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 ELP6Q0PNE2 266 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 ILF3Q12906 894 aaKnown RBP eCLIP4.08□□□□□ -1.76
SNHG1-220ENST00000544550 MTM1Q13496 603 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 ART3Q13508 389 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 IRF4Q15306 451 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 SLC14A2Q15849 920 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 KLHL40Q2TBA0 621 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 FBLN7Q53RD9 439 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 PRR30Q53SZ7 412 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-220ENST00000544550 CT47A1Q5JQC4 288 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-220ENST00000544550 KRT39Q6A163 491 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 FBXL22Q6P050 247 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 WDR74Q6RFH5 385 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-220ENST00000544550 LCLAT1Q6UWP7 414 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 ZNF783Q6ZMS7 281 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 OVCH1Q7RTY7 1134 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 TTC7BQ86TV6 843 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 TAC4Q86UU9 113 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 C17orf82Q86X59 251 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-220ENST00000544550 ST6GALNAC3Q8NDV1 305 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 OR10G6Q8NH81 332 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 TAS1R2Q8TE23 839 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 SLC35F5Q8WV83 523 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 ISG20Q96AZ6 181 aaKnown RBP4.08□□□□□ -1.76
SNHG1-220ENST00000544550 SNRNP40Q96DI7 357 aaKnown RBP4.08□□□□□ -1.76
SNHG1-220ENST00000544550 STAMBPL1Q96FJ0 436 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 MED15Q96RN5 788 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 SPENQ96T58 3664 aaKnown RBP4.08□□□□□ -1.76
SNHG1-220ENST00000544550 CTRCQ99895 268 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 PLCD4Q9BRC7 762 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 APOOQ9BUR5 198 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 JAM3Q9BX67 310 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 GSDMCQ9BYG8 508 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 ULBP3Q9BZM4 244 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 ZDHHC6Q9H6R6 413 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 POPDC2Q9HBU9 364 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 MBNL1Q9NR56 388 aaKnown RBP4.08□□□□□ -1.76
SNHG1-220ENST00000544550 AGPAT4Q9NRZ5 378 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 MBNL3Q9NUK0 354 aaKnown RBP4.08□□□□□ -1.76
SNHG1-220ENST00000544550 DMAC2Q9NW81 257 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 TMEM51Q9NW97 253 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 RCOR3Q9P2K3 495 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-220ENST00000544550 HECAQ9UBI9 543 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-220ENST00000544550 FBXO2Q9UK22 296 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-220ENST00000544550 ITM2BQ9Y287 266 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 COQ6Q9Y2Z9 468 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 MRPS18BQ9Y676 258 aaKnown RBP4.08□□□□□ -1.76
SNHG1-220ENST00000544550 ABCA12Q86UK0 2595 aa4.08□□□□□ -1.76
SNHG1-220ENST00000544550 FLNCQ14315 2725 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 A0A1B0GUH1 482 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 PVALEFA0A1B0GWK0 134 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 CCDC66A2RUB6 948 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 C22orf46C9J442 243 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 M0QYV0 167 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 RNF103O00237 685 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 O00370 1275 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms