RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 NFKB1P19838 968 aa18.13■□□□□ 0.49
CCT4-204ENST00000544079 BDNFP23560 247 aa18.13■□□□□ 0.49
CCT4-204ENST00000544079 NCS1P62166 190 aa18.13■□□□□ 0.49
CCT4-204ENST00000544079 RBP5P82980 135 aa18.13■□□□□ 0.49
CCT4-204ENST00000544079 CDK5R2Q13319 367 aa18.13■□□□□ 0.49
CCT4-204ENST00000544079 CLCA4Q14CN2 919 aa18.13■□□□□ 0.49
CCT4-204ENST00000544079 BRMS1LQ5PSV4 323 aa18.13■□□□□ 0.49
CCT4-204ENST00000544079 ATAD3CQ5T2N8 411 aa18.13■□□□□ 0.49
CCT4-204ENST00000544079 FAM131BQ86XD5 332 aa18.13■□□□□ 0.49
CCT4-204ENST00000544079 RNF149Q8NC42 400 aa18.13■□□□□ 0.49
CCT4-204ENST00000544079 MCOLN3Q8TDD5 553 aa18.13■□□□□ 0.49
CCT4-204ENST00000544079 NXF2Q9GZY0 626 aaKnown RBP18.13■□□□□ 0.49
CCT4-204ENST00000544079 COMMD8Q9NX08 183 aa18.13■□□□□ 0.49
CCT4-204ENST00000544079 OPTCQ9UBM4 332 aa18.13■□□□□ 0.49
CCT4-204ENST00000544079 GRIP1Q9Y3R0 1128 aa18.13■□□□□ 0.49
CCT4-204ENST00000544079 PCDHGA10Q9Y5H3 936 aa18.13■□□□□ 0.49
CCT4-204ENST00000544079 HSPE1-MOB4S4R3N1 261 aa18.13■□□□□ 0.49
CCT4-204ENST00000544079 FAM25AB3EWG3 89 aa18.12■□□□□ 0.49
CCT4-204ENST00000544079 FAM25CB3EWG5 89 aa18.12■□□□□ 0.49
CCT4-204ENST00000544079 FAM25GB3EWG6 89 aa18.12■□□□□ 0.49
CCT4-204ENST00000544079 ANXA6P08133 673 aa18.12■□□□□ 0.49
CCT4-204ENST00000544079 PAMP19021 973 aa18.12■□□□□ 0.49
CCT4-204ENST00000544079 PIGAP37287 484 aa18.12■□□□□ 0.49
CCT4-204ENST00000544079 DDOSTP39656 456 aa18.12■□□□□ 0.49
CCT4-204ENST00000544079 SLC1A2P43004 574 aa18.12■□□□□ 0.49
CCT4-204ENST00000544079 ARHGEF6Q15052 776 aa18.12■□□□□ 0.49
CCT4-204ENST00000544079 UNC50Q53HI1 259 aa18.12■□□□□ 0.49
CCT4-204ENST00000544079 KANK2Q63ZY3 851 aa18.12■□□□□ 0.49
CCT4-204ENST00000544079 EEF1DP3Q658K8 133 aa18.12■□□□□ 0.49
CCT4-204ENST00000544079 ZCCHC8Q6NZY4 707 aaKnown RBP18.12■□□□□ 0.49
CCT4-204ENST00000544079 RAVER1Q8IY67 606 aaKnown RBP18.12■□□□□ 0.49
CCT4-204ENST00000544079 TMEM199Q8N511 208 aa18.12■□□□□ 0.49
CCT4-204ENST00000544079 LSM14AQ8ND56 463 aaKnown RBP18.12■□□□□ 0.49
CCT4-204ENST00000544079 SETD9Q8NE22 299 aa18.12■□□□□ 0.49
CCT4-204ENST00000544079 GABPB2Q8TAK5 448 aaPredicted RBP18.12■□□□□ 0.49
CCT4-204ENST00000544079 TWIST2Q8WVJ9 160 aa18.12■□□□□ 0.49
CCT4-204ENST00000544079 ISG20Q96AZ6 181 aaKnown RBP18.12■□□□□ 0.49
CCT4-204ENST00000544079 ZHX1-C8orf76Q96EF9 292 aa18.12■□□□□ 0.49
CCT4-204ENST00000544079 CHST12Q9NRB3 414 aa18.12■□□□□ 0.49
CCT4-204ENST00000544079 IL37Q9NZH6 218 aa18.12■□□□□ 0.49
CCT4-204ENST00000544079 CENPXA8MT69 81 aa18.12■□□□□ 0.49
CCT4-204ENST00000544079 ITGAMP11215 1152 aa18.12■□□□□ 0.49
CCT4-204ENST00000544079 CLCN5P51795 746 aa18.12■□□□□ 0.49
CCT4-204ENST00000544079 HERVK_113P63132 956 aa18.12■□□□□ 0.49
CCT4-204ENST00000544079 GRB7Q14451 532 aa18.12■□□□□ 0.49
CCT4-204ENST00000544079 DUSP7Q16829 419 aa18.12■□□□□ 0.49
CCT4-204ENST00000544079 BNIPLQ7Z465 357 aa18.12■□□□□ 0.49
CCT4-204ENST00000544079 METTL4Q8N3J2 472 aa18.12■□□□□ 0.49
CCT4-204ENST00000544079 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.12■□□□□ 0.496e-6■■■■□ 24.9
CCT4-204ENST00000544079 ITFG1Q8TB96 612 aa18.12■□□□□ 0.49
CCT4-204ENST00000544079 ERVK-6Q9BXR3 956 aa18.12■□□□□ 0.49
CCT4-204ENST00000544079 CCNB1IP1Q9NPC3 277 aa18.12■□□□□ 0.49
CCT4-204ENST00000544079 FZD1Q9UP38 647 aa18.12■□□□□ 0.49
CCT4-204ENST00000544079 WBP11Q9Y2W2 641 aaKnown RBP18.12■□□□□ 0.49
CCT4-204ENST00000544079 CNTNAP1P78357 1384 aa18.12■□□□□ 0.49
CCT4-204ENST00000544079 ASPDHA6ND91 283 aa18.11■□□□□ 0.49
CCT4-204ENST00000544079 PDZK1P1A8MUH7 402 aa18.11■□□□□ 0.49
CCT4-204ENST00000544079 AZIN1O14977 448 aa18.11■□□□□ 0.49
CCT4-204ENST00000544079 CACNG3O60359 315 aa18.11■□□□□ 0.49
CCT4-204ENST00000544079 TRAPPC2P0DI81 140 aa18.11■□□□□ 0.49
CCT4-204ENST00000544079 TRAPPC2BP0DI82 140 aa18.11■□□□□ 0.49
CCT4-204ENST00000544079 CD6P30203 668 aa18.11■□□□□ 0.49
CCT4-204ENST00000544079 HTR3AP46098 478 aa18.11■□□□□ 0.49
CCT4-204ENST00000544079 CLK3P49761 638 aaKnown RBP18.11■□□□□ 0.49
CCT4-204ENST00000544079 AIF1P55008 147 aa18.11■□□□□ 0.49
CCT4-204ENST00000544079 LSM3P62310 102 aaKnown RBP18.11■□□□□ 0.49
CCT4-204ENST00000544079 SLC35A2P78381 396 aa18.11■□□□□ 0.49
CCT4-204ENST00000544079 ZFP69Q49AA0 526 aa18.11■□□□□ 0.49
CCT4-204ENST00000544079 KIAA0319Q5VV43 1072 aa18.11■□□□□ 0.49
CCT4-204ENST00000544079 KIAA0930Q6ICG6 404 aaPredicted RBP18.11■□□□□ 0.49
CCT4-204ENST00000544079 RPS27LQ71UM5 84 aaKnown RBP18.11■□□□□ 0.49
CCT4-204ENST00000544079 GDPD3Q7L5L3 318 aa18.11■□□□□ 0.49
CCT4-204ENST00000544079 TMEM192Q8IY95 271 aa18.11■□□□□ 0.49
CCT4-204ENST00000544079 UBQLNLQ8IYU4 475 aa18.11■□□□□ 0.49
CCT4-204ENST00000544079 SDR16C5Q8N3Y7 309 aa18.11■□□□□ 0.49
CCT4-204ENST00000544079 NETO2Q8NC67 525 aa18.11■□□□□ 0.49
CCT4-204ENST00000544079 PPHLN1Q8NEY8 458 aaKnown RBP18.11■□□□□ 0.49
CCT4-204ENST00000544079 PHF21BQ96EK2 531 aa18.11■□□□□ 0.49
CCT4-204ENST00000544079 RPL10LQ96L21 214 aaKnown RBP18.11■□□□□ 0.49
CCT4-204ENST00000544079 TEKT5Q96M29 485 aa18.11■□□□□ 0.49
CCT4-204ENST00000544079 DEPDC7Q96QD5 511 aa18.11■□□□□ 0.49
CCT4-204ENST00000544079 APOL2Q9BQE5 337 aa18.11■□□□□ 0.49
CCT4-204ENST00000544079 SMOC2Q9H3U7 446 aa18.11■□□□□ 0.49
CCT4-204ENST00000544079 SNTG2Q9NY99 539 aa18.11■□□□□ 0.49
CCT4-204ENST00000544079 PIP5K1BO14986 540 aa18.11■□□□□ 0.49
CCT4-204ENST00000544079 ICMTO60725 284 aa18.11■□□□□ 0.49
CCT4-204ENST00000544079 HOXB6P17509 224 aaKnown RBP18.11■□□□□ 0.49
CCT4-204ENST00000544079 ARNTP27540 789 aa18.11■□□□□ 0.49
CCT4-204ENST00000544079 ALDH4A1P30038 563 aa18.11■□□□□ 0.49
CCT4-204ENST00000544079 HCAR3P49019 387 aa18.11■□□□□ 0.49
CCT4-204ENST00000544079 SULT1E1P49888 294 aa18.11■□□□□ 0.49
CCT4-204ENST00000544079 SEPHS1P49903 392 aa18.11■□□□□ 0.49
CCT4-204ENST00000544079 OR4D2P58180 307 aa18.11■□□□□ 0.49
CCT4-204ENST00000544079 MRPS15P82914 257 aaKnown RBP18.11■□□□□ 0.49
CCT4-204ENST00000544079 SP2Q02086 613 aa18.11■□□□□ 0.49
CCT4-204ENST00000544079 TRAF3Q13114 568 aa18.11■□□□□ 0.49
CCT4-204ENST00000544079 FAM160B1Q5W0V3 765 aa18.11■□□□□ 0.49
CCT4-204ENST00000544079 HID1Q8IV36 788 aa18.11■□□□□ 0.49
CCT4-204ENST00000544079 CLEC4CQ8WTT0 213 aa18.11■□□□□ 0.49
CCT4-204ENST00000544079 FAM167AQ96KS9 214 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms