RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 MRNIPQ6NTE8 343 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 PSAPL1Q6NUJ1 521 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 TMEM220Q6QAJ8 160 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 CRTC3Q6UUV7 619 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 CAPN12Q6ZSI9 719 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 ADGRG6Q86SQ4 1221 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 SDCCAG8Q86SQ7 713 aaPredicted RBP6.25□□□□□ -1.41
LTBR-212ENST00000543542 LRRTM4Q86VH4 590 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 SERPINA9Q86WD7 417 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 GKN2Q86XP6 184 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 CCNJLQ8IV13 435 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 PALM2Q8IXS6 379 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 IFT20Q8IY31 132 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 ZBED8Q8IZ13 594 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 NXPE1Q8N323 547 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 FSTL5Q8N475 847 aaPredicted RBP6.25□□□□□ -1.41
LTBR-212ENST00000543542 EID2Q8N6I1 236 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.25□□□□□ -1.41
LTBR-212ENST00000543542 FBXO36Q8NEA4 188 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 OR13J1Q8NGT2 312 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 DTX3LQ8TDB6 740 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 NETO1Q8TDF5 533 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 RHBDD1Q8TEB9 315 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 PYROXD1Q8WU10 500 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 HEXDCQ8WVB3 486 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 PEX13Q92968 403 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 ART4Q93070 314 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 MFSD3Q96ES6 412 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 PDXPQ96GD0 296 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 COX14Q96I36 57 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 SIGLEC10Q96LC7 697 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 ZNF778Q96MU6 729 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 OR2M4Q96R27 311 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 EBNA1BP2Q99848 306 aaKnown RBP6.25□□□□□ -1.41
LTBR-212ENST00000543542 C19orf43Q9BQ61 176 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 KIFC1Q9BW19 673 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 GSDMCQ9BYG8 508 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 TCEAL2Q9H3H9 227 aaPredicted RBP6.25□□□□□ -1.41
LTBR-212ENST00000543542 OSGEPL1Q9H4B0 414 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 SLC32A1Q9H598 525 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 RMI1Q9H9A7 625 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 MRM3Q9HC36 420 aaKnown RBP6.25□□□□□ -1.41
LTBR-212ENST00000543542 FGF22Q9HCT0 170 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 SAYSD1Q9NPB0 183 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 C20orf96Q9NUD7 363 aaPredicted RBP6.25□□□□□ -1.41
LTBR-212ENST00000543542 VPS18Q9P253 973 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 ATXN10Q9UBB4 475 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 FAM8A1Q9UBU6 413 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 ZC3H7BQ9UGR2 993 aaKnown RBP6.25□□□□□ -1.41
LTBR-212ENST00000543542 RIMKLBQ9ULI2 386 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 PRKAB1Q9Y478 270 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 OAS3Q9Y6K5 1087 aaKnown RBP6.25□□□□□ -1.41
LTBR-212ENST00000543542 TDRD6O60522 2096 aaKnown RBP6.25□□□□□ -1.41
LTBR-212ENST00000543542 PI4KAP42356 2102 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 SDK1Q7Z5N4 2213 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 FAM237BA0A1B0GVD1 139 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 UBA6A0AVT1 1052 aaPredicted RBP6.24□□□□□ -1.41
LTBR-212ENST00000543542 OR2AG2A6NM03 316 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 GPR89AB7ZAQ6 455 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 GOLGA8KD6RF30 607 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 GOLGA8TH3BQL2 631 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 H7C0S8 307 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 GAPDHSO14556 408 aaPredicted RBP6.24□□□□□ -1.41
LTBR-212ENST00000543542 CDX4O14627 284 aaPredicted RBP6.24□□□□□ -1.41
LTBR-212ENST00000543542 FLRT2O43155 660 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 NUAK1O60285 661 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 SNX2O60749 519 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 SLU7O95391 586 aaKnown RBP6.24□□□□□ -1.41
LTBR-212ENST00000543542 TTC4O95801 387 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 IVLP07476 585 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 GPR89BP0CG08 455 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 ZNF883P0CG24 379 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 PRSS56P0CW18 603 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 ACP5P13686 325 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 ATP1B2P14415 290 aaPredicted RBP6.24□□□□□ -1.41
LTBR-212ENST00000543542 ZNF7P17097 686 aaPredicted RBP6.24□□□□□ -1.41
LTBR-212ENST00000543542 ZNF8P17098 575 aaPredicted RBP6.24□□□□□ -1.41
LTBR-212ENST00000543542 VCLP18206 1134 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 SDHBP21912 280 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 TGM1P22735 817 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 DGKAP23743 735 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 ACRV1P26436 265 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 ACTR1BP42025 376 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 GRK6P43250 576 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 RXRGP48443 463 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 TTPAP49638 278 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 CDKN1CP49918 316 aaPredicted RBP6.24□□□□□ -1.41
LTBR-212ENST00000543542 DRG2P55039 364 aaKnown RBP6.24□□□□□ -1.41
LTBR-212ENST00000543542 ACTR1AP61163 376 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 DAB2P98082 770 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 XIAPP98170 497 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 SLC14A1Q13336 389 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 DEFB133Q30KQ1 61 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 MSS51Q4VC12 460 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 SPANXN3Q5MJ09 141 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 ARMC3Q5W041 872 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 PTRHD1Q6GMV3 140 aaKnown RBP6.24□□□□□ -1.41
LTBR-212ENST00000543542 KIAA0930Q6ICG6 404 aaPredicted RBP6.24□□□□□ -1.41
LTBR-212ENST00000543542 ZNF449Q6P9G9 518 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 SLC30A9Q6PML9 568 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms