RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 IKZF3Q9UKT9 509 aa13.38□□□□□ -0.27
PPME1-208ENST00000543525 SLC8A2Q9UPR5 921 aa13.38□□□□□ -0.27
PPME1-208ENST00000543525 TIMM22Q9Y584 194 aa13.38□□□□□ -0.27
PPME1-208ENST00000543525 COMMD10Q9Y6G5 202 aa13.38□□□□□ -0.27
PPME1-208ENST00000543525 ILVBLA1L0T0 632 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 SAC3D1A6NKF1 404 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 SOCS2O14508 198 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 ARPC2O15144 300 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 EEDO75530 441 aaKnown RBP13.37□□□□□ -0.27
PPME1-208ENST00000543525 VNN2O95498 520 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 ALDH2P05091 517 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 RHOCP08134 193 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 PRKAR2AP13861 404 aaKnown RBP13.37□□□□□ -0.27
PPME1-208ENST00000543525 RGRP47804 291 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 ACLYP53396 1101 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 TUBA4AP68366 448 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 PLOD1Q02809 727 aaPredicted RBP13.37□□□□□ -0.27
PPME1-208ENST00000543525 ELAVL2Q12926 359 aaKnown RBP13.37□□□□□ -0.27
PPME1-208ENST00000543525 DUSP4Q13115 394 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 PDCD4Q53EL6 469 aaKnown RBP13.37□□□□□ -0.27
PPME1-208ENST00000543525 NHSL2Q5HYW2 709 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 GPSM1Q86YR5 675 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 LPCAT1Q8NF37 534 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 TMEM125Q96AQ2 219 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 TTLL2Q9BWV7 592 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 TDRD1Q9BXT4 1180 aaKnown RBP13.37□□□□□ -0.27
PPME1-208ENST00000543525 ADGRE3Q9BY15 652 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 NACA2Q9H009 215 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 CRISPLD1Q9H336 500 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 CLK4Q9HAZ1 481 aaKnown RBP13.37□□□□□ -0.27
PPME1-208ENST00000543525 AGPAT4Q9NRZ5 378 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 DUS2Q9NX74 493 aaKnown RBP13.37□□□□□ -0.27
PPME1-208ENST00000543525 EGFL7Q9UHF1 273 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 LEF1Q9UJU2 399 aaPredicted RBP13.37□□□□□ -0.27
PPME1-208ENST00000543525 AGO1Q9UL18 857 aaKnown RBP13.37□□□□□ -0.27
PPME1-208ENST00000543525 ACTL7AQ9Y615 435 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.37□□□□□ -0.27
PPME1-208ENST00000543525 KANSL1LA0AUZ9 987 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 DYTNA2CJ06 578 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 CCDC154A6NI56 674 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 C9JVG2 144 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 SLC22A3O75751 556 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 ASLP04424 464 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 CR2P20023 1033 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 MC4RP32245 332 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 DIO3P55073 304 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 EEFSECP57772 596 aaKnown RBP13.37□□□□□ -0.27
PPME1-208ENST00000543525 IL2P60568 153 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 ECT2LQ008S8 904 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 ZNF177Q13360 481 aaPredicted RBP13.37□□□□□ -0.27
PPME1-208ENST00000543525 RCAN2Q14206 197 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 XKR7Q5GH72 579 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 AARS2Q5JTZ9 985 aaKnown RBP13.37□□□□□ -0.27
PPME1-208ENST00000543525 GPRIN3Q6ZVF9 776 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 TFAP2CQ92754 450 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 CENPNQ96H22 339 aaPredicted RBP13.37□□□□□ -0.27
PPME1-208ENST00000543525 MYRFLQ96LU7 910 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 BIRC8Q96P09 236 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 KCTD14Q9BQ13 255 aaPredicted RBP13.37□□□□□ -0.27
PPME1-208ENST00000543525 BRINP2Q9C0B6 783 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 ELAC1Q9H777 363 aaKnown RBP13.37□□□□□ -0.27
PPME1-208ENST00000543525 OLAHQ9NV23 265 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 CD274Q9NZQ7 290 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 ZIM2Q9NZV7 527 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 SUN2Q9UH99 717 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 PCDHB7Q9Y5E2 793 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 RAI2Q9Y5P3 530 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 CEPT1Q9Y6K0 416 aa13.37□□□□□ -0.27
PPME1-208ENST00000543525 A0A1B0GTL3 188 aa13.36□□□□□ -0.27
PPME1-208ENST00000543525 NCF1BA6NI72 391 aaPredicted RBP13.36□□□□□ -0.27
PPME1-208ENST00000543525 NCF1CA8MVU1 366 aaPredicted RBP13.36□□□□□ -0.27
PPME1-208ENST00000543525 H3BNC9 293 aa13.36□□□□□ -0.27
PPME1-208ENST00000543525 STX7O15400 261 aaKnown RBP13.36□□□□□ -0.27
PPME1-208ENST00000543525 TBC1D4O60343 1298 aa13.36□□□□□ -0.27
PPME1-208ENST00000543525 PRLP01236 227 aa13.36□□□□□ -0.27
PPME1-208ENST00000543525 C7P10643 843 aa13.36□□□□□ -0.27
PPME1-208ENST00000543525 UMPSP11172 480 aa13.36□□□□□ -0.27
PPME1-208ENST00000543525 NCF1P14598 390 aaPredicted RBP13.36□□□□□ -0.27
PPME1-208ENST00000543525 TM4SF4P48230 202 aa13.36□□□□□ -0.27
PPME1-208ENST00000543525 ALDH3B2P48448 385 aa13.36□□□□□ -0.27
PPME1-208ENST00000543525 GSK3BP49841 420 aa13.36□□□□□ -0.27
PPME1-208ENST00000543525 AGTR2P50052 363 aa13.36□□□□□ -0.27
PPME1-208ENST00000543525 CLCN4P51793 760 aa13.36□□□□□ -0.27
PPME1-208ENST00000543525 ERVK-8P63133 956 aa13.36□□□□□ -0.27
PPME1-208ENST00000543525 AASDHQ4L235 1098 aaPredicted RBP13.36□□□□□ -0.27
PPME1-208ENST00000543525 ZRANB3Q5FWF4 1079 aa13.36□□□□□ -0.27
PPME1-208ENST00000543525 UGT3A1Q6NUS8 523 aa13.36□□□□□ -0.27
PPME1-208ENST00000543525 FUT10Q6P4F1 479 aa13.36□□□□□ -0.27
PPME1-208ENST00000543525 CHST9Q7L1S5 443 aa13.36□□□□□ -0.27
PPME1-208ENST00000543525 ADGRG5Q8IZF4 528 aa13.36□□□□□ -0.27
PPME1-208ENST00000543525 CBR4Q8N4T8 237 aa13.36□□□□□ -0.27
PPME1-208ENST00000543525 SIDT2Q8NBJ9 832 aaKnown RBP13.36□□□□□ -0.27
PPME1-208ENST00000543525 PDZD8Q8NEN9 1154 aa13.36□□□□□ -0.27
PPME1-208ENST00000543525 TRPV3Q8NET8 790 aa13.36□□□□□ -0.27
PPME1-208ENST00000543525 TNIP2Q8NFZ5 429 aa13.36□□□□□ -0.27
PPME1-208ENST00000543525 PLD4Q96BZ4 506 aa13.36□□□□□ -0.27
PPME1-208ENST00000543525 LINGO1Q96FE5 620 aa13.36□□□□□ -0.27
PPME1-208ENST00000543525 NSMCE3Q96MG7 304 aa13.36□□□□□ -0.27
PPME1-208ENST00000543525 MARCH5Q9NX47 278 aa13.36□□□□□ -0.27
PPME1-208ENST00000543525 ETAA1Q9NY74 926 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms