RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 ZNF395Q9H8N7 513 aaPredicted RBP9.25□□□□□ -0.93
GNE-206ENST00000543356 KCNK13Q9HB14 408 aa9.25□□□□□ -0.93
GNE-206ENST00000543356 ABCF3Q9NUQ8 709 aa9.25□□□□□ -0.93
GNE-206ENST00000543356 SMOXQ9NWM0 555 aa9.25□□□□□ -0.93
GNE-206ENST00000543356 KCNK4Q9NYG8 393 aa9.25□□□□□ -0.93
GNE-206ENST00000543356 TRMT6Q9UJA5 497 aaKnown RBP9.25□□□□□ -0.93
GNE-206ENST00000543356 PPM1HQ9ULR3 514 aa9.25□□□□□ -0.93
GNE-206ENST00000543356 FAM50BQ9Y247 325 aa9.25□□□□□ -0.93
GNE-206ENST00000543356 MTF2Q9Y483 593 aaPredicted RBP9.25□□□□□ -0.93
GNE-206ENST00000543356 TICRRQ7Z2Z1 1910 aa9.25□□□□□ -0.93
GNE-206ENST00000543356 PSMD11O00231 422 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 TPD52L2O43399 206 aaKnown RBP9.24□□□□□ -0.93
GNE-206ENST00000543356 NPHS1O60500 1241 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 NIPSNAP2O75323 286 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 LYPLA1O75608 230 aaPredicted RBP9.24□□□□□ -0.93
GNE-206ENST00000543356 HLA-EP13747 358 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 XPAP23025 273 aaPredicted RBP9.24□□□□□ -0.93
GNE-206ENST00000543356 ARRB2P32121 409 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 CA5AP35218 305 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 SERPINB5P36952 375 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 ARFIP2P53365 341 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 RCN2Q14257 317 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 LRRC73Q5JTD7 316 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 MFSD4BQ5TF39 518 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 PAQR3Q6TCH7 311 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 SERPINA13PQ6UXR4 307 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 MACC1Q6ZN28 852 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 SLC22A9Q8IVM8 553 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 SFTPA1Q8IWL2 248 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 GBP7Q8N8V2 638 aaPredicted RBP9.24□□□□□ -0.93
GNE-206ENST00000543356 TXNDC5Q8NBS9 432 aaKnown RBP9.24□□□□□ -0.93
GNE-206ENST00000543356 PIWIL2Q8TC59 973 aaKnown RBP9.24□□□□□ -0.93
GNE-206ENST00000543356 PPP1R16AQ96I34 528 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 TMEM120AQ9BXJ8 343 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 TTYH1Q9H313 450 aaPredicted RBP9.24□□□□□ -0.93
GNE-206ENST00000543356 ZDHHC3Q9NYG2 299 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 SUN2Q9UH99 717 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 NUMBLQ9Y6R0 609 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 IGLV3-16A0A075B6K0 115 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 A0A1W2PPC1 479 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 E5RI56 91 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 ZBTB14O43829 449 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 HNRNPLP14866 589 aaKnown RBP eCLIP9.24□□□□□ -0.93
GNE-206ENST00000543356 ALOX15P16050 662 aaPredicted RBP9.24□□□□□ -0.93
GNE-206ENST00000543356 IL12RB1P42701 662 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 CLCN7P51798 805 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 HK2P52789 917 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 ENPP2Q13822 863 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 PIWIL4Q7Z3Z4 852 aaKnown RBP9.24□□□□□ -0.93
GNE-206ENST00000543356 HSD11B1LQ7Z5J1 315 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 DSG4Q86SJ6 1040 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 TTC7BQ86TV6 843 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 RBM12BQ8IXT5 1001 aaKnown RBP9.24□□□□□ -0.93
GNE-206ENST00000543356 PIP4K2CQ8TBX8 421 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 PTERQ96BW5 349 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 FAM129BQ96TA1 746 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 RPP25Q9BUL9 199 aaKnown RBP9.24□□□□□ -0.93
GNE-206ENST00000543356 UNKQ9C0B0 810 aaKnown RBP9.24□□□□□ -0.93
GNE-206ENST00000543356 STN1Q9H668 368 aaKnown RBP9.24□□□□□ -0.93
GNE-206ENST00000543356 ALG9Q9H6U8 611 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 CD207Q9UJ71 328 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 HAO1Q9UJM8 370 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 DCTN4Q9UJW0 460 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 SARDHQ9UL12 918 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 HCN2Q9UL51 889 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 DNAJC16Q9Y2G8 782 aa9.24□□□□□ -0.93
GNE-206ENST00000543356 TCF20Q9UGU0 1960 aaKnown RBP9.23□□□□□ -0.93
GNE-206ENST00000543356 A0A0G2JND7 137 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 A8MT66 165 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 H0Y858 1186 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 KPNA3O00505 521 aaPredicted RBP9.23□□□□□ -0.93
GNE-206ENST00000543356 NPC1O15118 1278 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 KERAO60938 352 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 HSPA4LO95757 839 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 UGT1A6P19224 532 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 UGT1A1P22309 533 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 UGT1A4P22310 534 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 UGT1A3P35503 534 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 UGT1A5P35504 534 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 NSG1P42857 185 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 ADGRE1Q14246 886 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 GRIN2CQ14957 1233 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 ATP13A5Q4VNC0 1218 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 SPDYAQ5MJ70 313 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 PTRHD1Q6GMV3 140 aaKnown RBP9.23□□□□□ -0.93
GNE-206ENST00000543356 ATG14Q6ZNE5 492 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 WDR75Q8IWA0 830 aaKnown RBP9.23□□□□□ -0.93
GNE-206ENST00000543356 NRSN1Q8IZ57 195 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 TRAM1L1Q8N609 369 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 SIDT2Q8NBJ9 832 aaKnown RBP9.23□□□□□ -0.93
GNE-206ENST00000543356 KIAA1191Q96A73 305 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 ARRDC3Q96B67 414 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 BOCQ9BWV1 1114 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 SLC40A1Q9NP59 571 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 GALPQ9UBC7 116 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 DHRS7Q9Y394 339 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 CEP290O15078 2479 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 RANBP2P49792 3224 aaKnown RBP9.23□□□□□ -0.93
GNE-206ENST00000543356 C1QTNF3-AMACRE9PGA6 284 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 SPINT1O43278 529 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms