RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 RAD51Q06609 339 aa16.47■□□□□ 0.23
KDM2B-216ENST00000543025 TRIP4Q15650 581 aaPredicted RBP16.47■□□□□ 0.23
KDM2B-216ENST00000543025 RABL3Q5HYI8 236 aa16.47■□□□□ 0.23
KDM2B-216ENST00000543025 MIB1Q86YT6 1006 aa16.47■□□□□ 0.23
KDM2B-216ENST00000543025 CYGBQ8WWM9 190 aa16.47■□□□□ 0.23
KDM2B-216ENST00000543025 VPS33AQ96AX1 596 aa16.47■□□□□ 0.23
KDM2B-216ENST00000543025 ZNF599Q96NL3 588 aa16.47■□□□□ 0.23
KDM2B-216ENST00000543025 PHF12Q96QT6 1004 aa16.47■□□□□ 0.23
KDM2B-216ENST00000543025 NUSAP1Q9BXS6 441 aaKnown RBP16.47■□□□□ 0.23
KDM2B-216ENST00000543025 AIG1Q9NVV5 245 aa16.47■□□□□ 0.23
KDM2B-216ENST00000543025 TIMM22Q9Y584 194 aa16.47■□□□□ 0.23
KDM2B-216ENST00000543025 ANKRD36A6QL64 1941 aa16.46■□□□□ 0.23
KDM2B-216ENST00000543025 TCRBV5S2A0A599 114 aa16.46■□□□□ 0.23
KDM2B-216ENST00000543025 EI24O14681 340 aa16.46■□□□□ 0.23
KDM2B-216ENST00000543025 PRAMEF11O60813 436 aa16.46■□□□□ 0.23
KDM2B-216ENST00000543025 ECI2O75521 394 aa16.46■□□□□ 0.23
KDM2B-216ENST00000543025 EEDO75530 441 aaKnown RBP16.46■□□□□ 0.23
KDM2B-216ENST00000543025 TBX18O95935 607 aa16.46■□□□□ 0.23
KDM2B-216ENST00000543025 CHEK2O96017 543 aa16.46■□□□□ 0.23
KDM2B-216ENST00000543025 SERPINF2P08697 491 aa16.46■□□□□ 0.23
KDM2B-216ENST00000543025 ACVRL1P37023 503 aa16.46■□□□□ 0.23
KDM2B-216ENST00000543025 GJA8P48165 433 aa16.46■□□□□ 0.23
KDM2B-216ENST00000543025 ECT2LQ008S8 904 aa16.46■□□□□ 0.23
KDM2B-216ENST00000543025 AASDHQ4L235 1098 aaPredicted RBP16.46■□□□□ 0.23
KDM2B-216ENST00000543025 EFL1Q7Z2Z2 1120 aaKnown RBP16.46■□□□□ 0.23
KDM2B-216ENST00000543025 GPR180Q86V85 440 aa16.46■□□□□ 0.23
KDM2B-216ENST00000543025 EBF1Q9UH73 591 aa16.46■□□□□ 0.23
KDM2B-216ENST00000543025 hCG_2014768A0A024R1R8 64 aa16.46■□□□□ 0.22
KDM2B-216ENST00000543025 ASPDHA6ND91 283 aa16.46■□□□□ 0.22
KDM2B-216ENST00000543025 CCDC154A6NI56 674 aa16.46■□□□□ 0.22
KDM2B-216ENST00000543025 SNAP91O60641 907 aa16.46■□□□□ 0.22
KDM2B-216ENST00000543025 PRSS56P0CW18 603 aa16.46■□□□□ 0.22
KDM2B-216ENST00000543025 FMO4P31512 558 aa16.46■□□□□ 0.22
KDM2B-216ENST00000543025 LIPEQ05469 1076 aa16.46■□□□□ 0.22
KDM2B-216ENST00000543025 MYBPC3Q14896 1274 aa16.46■□□□□ 0.22
KDM2B-216ENST00000543025 TSNQ15631 228 aaKnown RBP16.46■□□□□ 0.22
KDM2B-216ENST00000543025 NFE2Q16621 373 aaPredicted RBP16.46■□□□□ 0.22
KDM2B-216ENST00000543025 FBXO48Q5FWF7 155 aa16.46■□□□□ 0.22
KDM2B-216ENST00000543025 ABRAXAS1Q6UWZ7 409 aa16.46■□□□□ 0.22
KDM2B-216ENST00000543025 TBC1D21Q8IYX1 336 aa16.46■□□□□ 0.22
KDM2B-216ENST00000543025 TEX37Q96LM6 180 aa16.46■□□□□ 0.22
KDM2B-216ENST00000543025 MUC3BQ9H195 1237 aa16.46■□□□□ 0.22
KDM2B-216ENST00000543025 SMPD3Q9NY59 655 aaPredicted RBP16.46■□□□□ 0.22
KDM2B-216ENST00000543025 LEF1Q9UJU2 399 aaPredicted RBP16.46■□□□□ 0.22
KDM2B-216ENST00000543025 ANAPC2Q9UJX6 822 aa16.46■□□□□ 0.22
KDM2B-216ENST00000543025 MED16Q9Y2X0 877 aa16.46■□□□□ 0.22
KDM2B-216ENST00000543025 HEMK1Q9Y5R4 338 aaPredicted RBP16.46■□□□□ 0.22
KDM2B-216ENST00000543025 ARVCFO00192 962 aa16.45■□□□□ 0.22
KDM2B-216ENST00000543025 STX16O14662 325 aa16.45■□□□□ 0.22
KDM2B-216ENST00000543025 CLOCKO15516 846 aa16.45■□□□□ 0.22
KDM2B-216ENST00000543025 ESRRBO95718 433 aa16.45■□□□□ 0.22
KDM2B-216ENST00000543025 UROSP10746 265 aa16.45■□□□□ 0.22
KDM2B-216ENST00000543025 MAPKAPK2P49137 400 aa16.45■□□□□ 0.22
KDM2B-216ENST00000543025 SETMARQ53H47 684 aaPredicted RBP16.45■□□□□ 0.22
KDM2B-216ENST00000543025 XKR7Q5GH72 579 aa16.45■□□□□ 0.22
KDM2B-216ENST00000543025 PAGE3Q5JUK9 113 aa16.45■□□□□ 0.22
KDM2B-216ENST00000543025 PAPD5Q8NDF8 572 aaKnown RBP16.45■□□□□ 0.22
KDM2B-216ENST00000543025 FBXL20Q96IG2 436 aa16.45■□□□□ 0.22
KDM2B-216ENST00000543025 C1QTNF3Q9BXJ4 246 aa16.45■□□□□ 0.22
KDM2B-216ENST00000543025 BRINP2Q9C0B6 783 aa16.45■□□□□ 0.22
KDM2B-216ENST00000543025 NLE1Q9NVX2 485 aaPredicted RBP16.45■□□□□ 0.22
KDM2B-216ENST00000543025 IKZF3Q9UKT9 509 aa16.45■□□□□ 0.22
KDM2B-216ENST00000543025 FADS3Q9Y5Q0 445 aa16.45■□□□□ 0.22
KDM2B-216ENST00000543025 SLC22A3O75751 556 aa16.45■□□□□ 0.22
KDM2B-216ENST00000543025 SOAT2O75908 522 aa16.45■□□□□ 0.22
KDM2B-216ENST00000543025 OAZ2O95190 189 aa16.45■□□□□ 0.22
KDM2B-216ENST00000543025 NDST3O95803 873 aa16.45■□□□□ 0.22
KDM2B-216ENST00000543025 MLYCDO95822 493 aa16.45■□□□□ 0.22
KDM2B-216ENST00000543025 ZFP36L2P47974 494 aaKnown RBP16.45■□□□□ 0.22
KDM2B-216ENST00000543025 GALK1P51570 392 aa16.45■□□□□ 0.22
KDM2B-216ENST00000543025 FUT11Q495W5 492 aa16.45■□□□□ 0.22
KDM2B-216ENST00000543025 TXNDC11Q6PKC3 985 aa16.45■□□□□ 0.22
KDM2B-216ENST00000543025 PATL1Q86TB9 770 aaKnown RBP16.45■□□□□ 0.22
KDM2B-216ENST00000543025 TMEM199Q8N511 208 aa16.45■□□□□ 0.22
KDM2B-216ENST00000543025 DHRSXQ8N5I4 330 aa16.45■□□□□ 0.22
KDM2B-216ENST00000543025 FUBP1Q96AE4 644 aaKnown RBP16.45■□□□□ 0.22
KDM2B-216ENST00000543025 C12orf43Q96C57 262 aaKnown RBP16.45■□□□□ 0.22
KDM2B-216ENST00000543025 NPLQ9BXD5 320 aaPredicted RBP16.45■□□□□ 0.22
KDM2B-216ENST00000543025 PFDN4Q9NQP4 134 aa16.45■□□□□ 0.22
KDM2B-216ENST00000543025 OLA1Q9NTK5 396 aaKnown RBP16.45■□□□□ 0.22
KDM2B-216ENST00000543025 SNX2O60749 519 aa16.44■□□□□ 0.22
KDM2B-216ENST00000543025 CLIC3O95833 236 aa16.44■□□□□ 0.22
KDM2B-216ENST00000543025 HMBSP08397 361 aa16.44■□□□□ 0.22
KDM2B-216ENST00000543025 NCK1P16333 377 aa16.44■□□□□ 0.22
KDM2B-216ENST00000543025 PRDX3P30048 256 aaKnown RBP16.44■□□□□ 0.22
KDM2B-216ENST00000543025 TTKP33981 857 aa16.44■□□□□ 0.22
KDM2B-216ENST00000543025 CAPGP40121 348 aa16.44■□□□□ 0.22
KDM2B-216ENST00000543025 EEFSECP57772 596 aaKnown RBP16.44■□□□□ 0.22
KDM2B-216ENST00000543025 ACBD5Q5T8D3 534 aaPredicted RBP16.44■□□□□ 0.22
KDM2B-216ENST00000543025 ALG1LQ6GMV1 187 aa16.44■□□□□ 0.22
KDM2B-216ENST00000543025 AFTPHQ6ULP2 937 aa16.44■□□□□ 0.22
KDM2B-216ENST00000543025 SYVN1Q86TM6 617 aa16.44■□□□□ 0.22
KDM2B-216ENST00000543025 CROCCP3Q8IVE0 287 aa16.44■□□□□ 0.22
KDM2B-216ENST00000543025 COLGALT2Q8IYK4 626 aa16.44■□□□□ 0.22
KDM2B-216ENST00000543025 PDFQ9HBH1 243 aa16.44■□□□□ 0.22
KDM2B-216ENST00000543025 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.44■□□□□ 0.22
KDM2B-216ENST00000543025 MARCH2Q9P0N8 246 aa16.44■□□□□ 0.22
KDM2B-216ENST00000543025 NCF1BA6NI72 391 aaPredicted RBP16.44■□□□□ 0.22
KDM2B-216ENST00000543025 NCF1CA8MVU1 366 aaPredicted RBP16.44■□□□□ 0.22
KDM2B-216ENST00000543025 CDC7O00311 574 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms