RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 FASLGP48023 281 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 RPL34P49207 117 aaKnown RBP4.71□□□□□ -1.66
LIMS1-214ENST00000542845 CXCR3P49682 368 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 ARL4DP49703 201 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 SMCPP49901 116 aaPredicted RBP4.71□□□□□ -1.66
LIMS1-214ENST00000542845 SUOXP51687 545 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 VAV2P52735 878 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 KCNK10P57789 538 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 LTBQ06643 244 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 Q0VFX4 171 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 CDC16Q13042 620 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 PDCLQ13371 301 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 TUBB3Q13509 450 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 ASIC2Q16515 512 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 SKOR2Q2VWA4 1001 aaPredicted RBP4.71□□□□□ -1.66
LIMS1-214ENST00000542845 BRMS1LQ5PSV4 323 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 VWA5B1Q5TIE3 1220 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 LCN10Q6JVE6 187 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 IRGCQ6NXR0 463 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 ZNF662Q6ZS27 426 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 C11orf57Q6ZUT1 292 aaPredicted RBP4.71□□□□□ -1.66
LIMS1-214ENST00000542845 TRIM74Q86UV6 250 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 JAZF1Q86VZ6 243 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 ZSWIM9Q86XI8 627 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 KRTAP1-3Q8IUG1 177 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 TMEM126BQ8IUX1 230 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 ARHGEF19Q8IW93 802 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 SFRP1Q8N474 314 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 ZBTB2Q8N680 514 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 ENDOVQ8N8Q3 282 aaKnown RBP4.71□□□□□ -1.66
LIMS1-214ENST00000542845 TMEM102Q8N9M5 508 aaPredicted RBP4.71□□□□□ -1.66
LIMS1-214ENST00000542845 SIDT2Q8NBJ9 832 aaKnown RBP4.71□□□□□ -1.66
LIMS1-214ENST00000542845 CLEC1AQ8NC01 280 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 LINC00301Q8NCQ3 95 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 DNAJB14Q8TBM8 379 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 TMEM174Q8WUU8 243 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 FAR1Q8WVX9 515 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 ZNF606Q8WXB4 792 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 SHC3Q92529 594 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 TM9SF4Q92544 642 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 CLIP3Q96DZ5 547 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 NUS1Q96E22 293 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 CCDC120Q96HB5 630 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 C1orf74Q96LT6 269 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 MAGEB10Q96LZ2 347 aaPredicted RBP4.71□□□□□ -1.66
LIMS1-214ENST00000542845 FERD3LQ96RJ6 166 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 CPXM1Q96SM3 734 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 TBCBQ99426 244 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.71□□□□□ -1.66
LIMS1-214ENST00000542845 FRMD8Q9BZ67 464 aaPredicted RBP4.71□□□□□ -1.66
LIMS1-214ENST00000542845 MAGEB5Q9BZ81 275 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 GSX2Q9BZM3 304 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 KLC2Q9H0B6 622 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 CHST8Q9H2A9 424 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 MAGEF1Q9HAY2 307 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 ACP6Q9NPH0 428 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 FGF21Q9NSA1 209 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.71□□□□□ -1.66
LIMS1-214ENST00000542845 CD84Q9UIB8 345 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 RARRES3Q9UL19 164 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 KCNK6Q9Y257 313 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 CSAG2Q9Y5P2 127 aa4.71□□□□□ -1.66
LIMS1-214ENST00000542845 DNHD1Q96M86 4753 aa4.7□□□□□ -1.66
LIMS1-214ENST00000542845 CCDC88CQ9P219 2028 aa4.7□□□□□ -1.66
LIMS1-214ENST00000542845 IGLV3-10A0A075B6K4 115 aa4.7□□□□□ -1.66
LIMS1-214ENST00000542845 LDB2O43679 373 aa4.7□□□□□ -1.66
LIMS1-214ENST00000542845 RAMP2O60895 175 aa4.7□□□□□ -1.66
LIMS1-214ENST00000542845 DAB1O75553 588 aa4.7□□□□□ -1.66
LIMS1-214ENST00000542845 SCRG1O75711 98 aa4.7□□□□□ -1.66
LIMS1-214ENST00000542845 UBXN7O94888 489 aa4.7□□□□□ -1.66
LIMS1-214ENST00000542845 BPNT1O95861 308 aa4.7□□□□□ -1.66
LIMS1-214ENST00000542845 ERBB2P04626 1255 aa4.7□□□□□ -1.66
LIMS1-214ENST00000542845 GLI1P08151 1106 aa4.7□□□□□ -1.66
LIMS1-214ENST00000542845 STSP08842 583 aa4.7□□□□□ -1.66
LIMS1-214ENST00000542845 ANKRD34CP0C6C1 535 aa4.7□□□□□ -1.66
LIMS1-214ENST00000542845 ESRRAP11474 423 aaPredicted RBP4.7□□□□□ -1.66
LIMS1-214ENST00000542845 FOLR1P15328 257 aa4.7□□□□□ -1.66
LIMS1-214ENST00000542845 GM2AP17900 193 aa4.7□□□□□ -1.66
LIMS1-214ENST00000542845 SERPINA4P29622 427 aa4.7□□□□□ -1.66
LIMS1-214ENST00000542845 ETV3P41162 512 aa4.7□□□□□ -1.66
LIMS1-214ENST00000542845 KIR3DL1P43629 444 aa4.7□□□□□ -1.66
LIMS1-214ENST00000542845 GPR1P46091 355 aa4.7□□□□□ -1.66
LIMS1-214ENST00000542845 POLR2LP62875 67 aaKnown RBP4.7□□□□□ -1.66
LIMS1-214ENST00000542845 CDK3Q00526 305 aa4.7□□□□□ -1.66
LIMS1-214ENST00000542845 SLC6A3Q01959 620 aa4.7□□□□□ -1.66
LIMS1-214ENST00000542845 BCL2L1Q07817 233 aa4.7□□□□□ -1.66
LIMS1-214ENST00000542845 RALGDSQ12967 914 aa4.7□□□□□ -1.66
LIMS1-214ENST00000542845 LBRQ14739 615 aaKnown RBP4.7□□□□□ -1.66
LIMS1-214ENST00000542845 CYTH1Q15438 398 aa4.7□□□□□ -1.66
LIMS1-214ENST00000542845 SPRED3Q2MJR0 410 aa4.7□□□□□ -1.66
LIMS1-214ENST00000542845 PYCR3Q53H96 274 aa4.7□□□□□ -1.66
LIMS1-214ENST00000542845 CRB2Q5IJ48 1285 aa4.7□□□□□ -1.66
LIMS1-214ENST00000542845 OTUD1Q5VV17 481 aaPredicted RBP4.7□□□□□ -1.66
LIMS1-214ENST00000542845 DUS1LQ6P1R4 473 aaKnown RBP4.7□□□□□ -1.66
LIMS1-214ENST00000542845 IYDQ6PHW0 289 aa4.7□□□□□ -1.66
LIMS1-214ENST00000542845 BRAT1Q6PJG6 821 aa4.7□□□□□ -1.66
LIMS1-214ENST00000542845 FAM180AQ6UWF9 173 aa4.7□□□□□ -1.66
LIMS1-214ENST00000542845 GFRALQ6UXV0 394 aa4.7□□□□□ -1.66
LIMS1-214ENST00000542845 CERS6Q6ZMG9 384 aa4.7□□□□□ -1.66
LIMS1-214ENST00000542845 FAM131BQ86XD5 332 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms