RNA–Protein interactions for RNA: ENST00000542778.5

NELFA-216, Transcript of negative elongation factor complex member A, humanhuman

TSL 1 (best) BASIC

Gene NELFA, Length 2,465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-216ENST00000542778 INMTO95050 263 aa16.92■□□□□ 0.3
NELFA-216ENST00000542778 MT-CO1P00395 513 aa16.92■□□□□ 0.3
NELFA-216ENST00000542778 SLC6A2P23975 617 aa16.92■□□□□ 0.3
NELFA-216ENST00000542778 DNAJB1P25685 340 aa16.92■□□□□ 0.3
NELFA-216ENST00000542778 BST2Q10589 180 aaKnown RBP16.92■□□□□ 0.3
NELFA-216ENST00000542778 HIST2H2ACQ16777 129 aaPredicted RBP16.92■□□□□ 0.3
NELFA-216ENST00000542778 PYCR3Q53H96 274 aa16.92■□□□□ 0.3
NELFA-216ENST00000542778 OTUD3Q5T2D3 398 aaPredicted RBP16.92■□□□□ 0.3
NELFA-216ENST00000542778 CERCAMQ5T4B2 595 aa16.92■□□□□ 0.3
NELFA-216ENST00000542778 SLC26A9Q7LBE3 791 aa16.92■□□□□ 0.3
NELFA-216ENST00000542778 CUZD1Q86UP6 607 aa16.92■□□□□ 0.3
NELFA-216ENST00000542778 DNAAF3Q8N9W5 541 aa16.92■□□□□ 0.3
NELFA-216ENST00000542778 OR7A2PQ8NGA2 310 aa16.92■□□□□ 0.3
NELFA-216ENST00000542778 C17orf80Q9BSJ5 609 aa16.92■□□□□ 0.3
NELFA-216ENST00000542778 CHST12Q9NRB3 414 aa16.92■□□□□ 0.3
NELFA-216ENST00000542778 A0A0J9YYE9 177 aa16.91■□□□□ 0.3
NELFA-216ENST00000542778 KMOO15229 486 aa16.91■□□□□ 0.3
NELFA-216ENST00000542778 SLC22A1O15245 554 aa16.91■□□□□ 0.3
NELFA-216ENST00000542778 GABARAPO95166 117 aa16.91■□□□□ 0.3
NELFA-216ENST00000542778 ITIH1P19827 911 aa16.91■□□□□ 0.3
NELFA-216ENST00000542778 APLP1P51693 650 aa16.91■□□□□ 0.3
NELFA-216ENST00000542778 STX1BP61266 288 aa16.91■□□□□ 0.3
NELFA-216ENST00000542778 UPP1Q16831 310 aa16.91■□□□□ 0.3
NELFA-216ENST00000542778 DGUOKQ16854 277 aa16.91■□□□□ 0.3
NELFA-216ENST00000542778 IMPG1Q17R60 797 aa16.91■□□□□ 0.3
NELFA-216ENST00000542778 CD300LGQ6UXG3 332 aa16.91■□□□□ 0.3
NELFA-216ENST00000542778 NEK10Q6ZWH5 1172 aa16.91■□□□□ 0.3
NELFA-216ENST00000542778 RPS27LQ71UM5 84 aaKnown RBP16.91■□□□□ 0.3
NELFA-216ENST00000542778 DCP2Q8IU60 420 aaKnown RBP16.91■□□□□ 0.3
NELFA-216ENST00000542778 LACC1Q8IV20 430 aa16.91■□□□□ 0.3
NELFA-216ENST00000542778 PYROXD2Q8N2H3 581 aa16.91■□□□□ 0.3
NELFA-216ENST00000542778 TTC39CQ8N584 583 aa16.91■□□□□ 0.3
NELFA-216ENST00000542778 CCDC185Q8N715 623 aa16.91■□□□□ 0.3
NELFA-216ENST00000542778 LINC01599Q8WXQ3 324 aa16.91■□□□□ 0.3
NELFA-216ENST00000542778 TMEM209Q96SK2 561 aa16.91■□□□□ 0.3
NELFA-216ENST00000542778 CASS4Q9NQ75 786 aa16.91■□□□□ 0.3
NELFA-216ENST00000542778 PTCH2Q9Y6C5 1203 aa16.91■□□□□ 0.3
NELFA-216ENST00000542778 TTC3P53804 2025 aa16.91■□□□□ 0.3
NELFA-216ENST00000542778 M0R3G1 203 aa16.91■□□□□ 0.3
NELFA-216ENST00000542778 GABRDO14764 452 aa16.91■□□□□ 0.3
NELFA-216ENST00000542778 HOXC11O43248 304 aaPredicted RBP16.91■□□□□ 0.3
NELFA-216ENST00000542778 AP2A1O95782 977 aa16.91■□□□□ 0.3
NELFA-216ENST00000542778 ALDOCP09972 364 aaKnown RBP16.91■□□□□ 0.3
NELFA-216ENST00000542778 WARSP23381 471 aaKnown RBP16.91■□□□□ 0.3
NELFA-216ENST00000542778 ATP5F1P24539 256 aaPredicted RBP16.91■□□□□ 0.3
NELFA-216ENST00000542778 ARSFP54793 590 aa16.91■□□□□ 0.3
NELFA-216ENST00000542778 MAP3K7CLP57077 242 aa16.91■□□□□ 0.3
NELFA-216ENST00000542778 GABARAPL2P60520 117 aa16.91■□□□□ 0.3
NELFA-216ENST00000542778 COPZ1P61923 177 aa16.91■□□□□ 0.3
NELFA-216ENST00000542778 ADIGQ0VDE8 80 aa16.91■□□□□ 0.3
NELFA-216ENST00000542778 ADPRMQ3LIE5 342 aa16.91■□□□□ 0.3
NELFA-216ENST00000542778 CYHR1Q6ZMK1 362 aa16.91■□□□□ 0.3
NELFA-216ENST00000542778 LARP4Q71RC2 724 aaKnown RBP eCLIP16.91■□□□□ 0.3
NELFA-216ENST00000542778 GPRIN1Q7Z2K8 1008 aa16.91■□□□□ 0.3
NELFA-216ENST00000542778 CEP97Q8IW35 865 aa16.91■□□□□ 0.3
NELFA-216ENST00000542778 TOP6BLQ8N6T0 577 aa16.91■□□□□ 0.3
NELFA-216ENST00000542778 OSCP1Q8WVF1 389 aa16.91■□□□□ 0.3
NELFA-216ENST00000542778 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.91■□□□□ 0.3
NELFA-216ENST00000542778 VPS33AQ96AX1 596 aa16.91■□□□□ 0.3
NELFA-216ENST00000542778 BTBD2Q9BX70 525 aa16.91■□□□□ 0.3
NELFA-216ENST00000542778 ALOXE3Q9BYJ1 711 aa16.91■□□□□ 0.3
NELFA-216ENST00000542778 TRIM8Q9BZR9 551 aa16.91■□□□□ 0.3
NELFA-216ENST00000542778 NDUFAF1Q9Y375 327 aa16.91■□□□□ 0.3
NELFA-216ENST00000542778 A0A0U1RQF3 1178 aa16.9■□□□□ 0.3
NELFA-216ENST00000542778 NDUFS2O75306 463 aa16.9■□□□□ 0.3
NELFA-216ENST00000542778 DNAJB5O75953 348 aa16.9■□□□□ 0.3
NELFA-216ENST00000542778 B3GAT3O94766 335 aa16.9■□□□□ 0.3
NELFA-216ENST00000542778 KCNK2O95069 426 aa16.9■□□□□ 0.3
NELFA-216ENST00000542778 CAPN3P20807 821 aa16.9■□□□□ 0.3
NELFA-216ENST00000542778 CASP3P42574 277 aa16.9■□□□□ 0.3
NELFA-216ENST00000542778 SERPINB10P48595 397 aa16.9■□□□□ 0.3
NELFA-216ENST00000542778 BCAT1P54687 386 aa16.9■□□□□ 0.3
NELFA-216ENST00000542778 PHC1P78364 1004 aa16.9■□□□□ 0.3
NELFA-216ENST00000542778 VPS26BQ4G0F5 336 aa16.9■□□□□ 0.3
NELFA-216ENST00000542778 CATSPEREQ5SY80 951 aa16.9■□□□□ 0.3
NELFA-216ENST00000542778 TMEM236Q5W0B7 351 aa16.9■□□□□ 0.3
NELFA-216ENST00000542778 HFE2Q6ZVN8 426 aa16.9■□□□□ 0.3
NELFA-216ENST00000542778 PID1Q7Z2X4 250 aa16.9■□□□□ 0.3
NELFA-216ENST00000542778 MRPL10Q7Z7H8 261 aaKnown RBP16.9■□□□□ 0.3
NELFA-216ENST00000542778 PSTKQ8IV42 348 aaKnown RBP16.9■□□□□ 0.3
NELFA-216ENST00000542778 PEX5LQ8IYB4 626 aa16.9■□□□□ 0.3
NELFA-216ENST00000542778 C8orf59Q8N0T1 100 aaPredicted RBP16.9■□□□□ 0.3
NELFA-216ENST00000542778 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.9■□□□□ 0.3
NELFA-216ENST00000542778 CCNYQ8ND76 341 aa16.9■□□□□ 0.3
NELFA-216ENST00000542778 ELMO2Q96JJ3 720 aa16.9■□□□□ 0.3
NELFA-216ENST00000542778 RTP3Q9BQQ7 232 aa16.9■□□□□ 0.3
NELFA-216ENST00000542778 SLCO3A1Q9UIG8 710 aa16.9■□□□□ 0.3
NELFA-216ENST00000542778 PDE10AQ9Y233 779 aa16.9■□□□□ 0.3
NELFA-216ENST00000542778 FRMPD3Q5JV73 1810 aa16.9■□□□□ 0.3
NELFA-216ENST00000542778 ATP6AP2A0A1C7CYW4 349 aa16.9■□□□□ 0.3
NELFA-216ENST00000542778 FAM172BPA6NC97 362 aa16.9■□□□□ 0.3
NELFA-216ENST00000542778 ATP6AP2O75787 350 aa16.9■□□□□ 0.3
NELFA-216ENST00000542778 THRBP10828 461 aa16.9■□□□□ 0.3
NELFA-216ENST00000542778 CDH1P12830 882 aa16.9■□□□□ 0.3
NELFA-216ENST00000542778 NCK1P16333 377 aa16.9■□□□□ 0.3
NELFA-216ENST00000542778 CHRM3P20309 590 aa16.9■□□□□ 0.3
NELFA-216ENST00000542778 ALDH3A2P51648 485 aa16.9■□□□□ 0.3
NELFA-216ENST00000542778 RAB10P61026 200 aa16.9■□□□□ 0.3
NELFA-216ENST00000542778 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.9■□□□□ 0.33e-7■■■■■ 28.9
NELFA-216ENST00000542778 CLEC20AQ6ZU45 233 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms