RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 MT-CO1P00395 513 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 UROSP10746 265 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 HGFP14210 728 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 CD53P19397 219 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 PTGER3P43115 390 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 PPP3CCP48454 512 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 ATXN3P54252 364 aaPredicted RBP6.49□□□□□ -1.37
PTPRO-208ENST00000542557 TRAF2Q12933 501 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 GRB7Q14451 532 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 TPGS2Q68CL5 300 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 LCN8Q6JVE9 175 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 UGT3A1Q6NUS8 523 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 HERC6Q8IVU3 1022 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 DDIASQ8IXT1 998 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 EME1Q96AY2 570 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 PDLIM5Q96HC4 596 aaKnown RBP6.49□□□□□ -1.37
PTPRO-208ENST00000542557 ZFRQ96KR1 1074 aaKnown RBP6.49□□□□□ -1.37
PTPRO-208ENST00000542557 KCNA7Q96RP8 456 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 KLF16Q9BXK1 252 aaPredicted RBP6.49□□□□□ -1.37
PTPRO-208ENST00000542557 TRIM54Q9BYV2 358 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 RSPH9Q9H1X1 276 aaPredicted RBP6.49□□□□□ -1.37
PTPRO-208ENST00000542557 PIDD1Q9HB75 910 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 HMX1Q9NP08 348 aaPredicted RBP6.49□□□□□ -1.37
PTPRO-208ENST00000542557 SLC52A3Q9NQ40 469 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 UBAP1Q9NZ09 502 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 NUDT4Q9NZJ9 180 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 MAP10Q9P2G4 905 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 GPR45Q9Y5Y3 372 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 PLXNA4Q9HCM2 1894 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 TYW5A2RUC4 315 aaKnown RBP6.49□□□□□ -1.37
PTPRO-208ENST00000542557 GRXCR2A6NFK2 248 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 ENO4A6NNW6 628 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 CBX4O00257 560 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 CDC7O00311 574 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 NME4O00746 187 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 SCAMP3O14828 347 aaKnown RBP6.49□□□□□ -1.37
PTPRO-208ENST00000542557 STX7O15400 261 aaKnown RBP6.49□□□□□ -1.37
PTPRO-208ENST00000542557 FZD6O60353 706 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 CRCPO75575 148 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 IL2P60568 153 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 RCAN2Q14206 197 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 TCTN1Q2MV58 587 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 CNPY1Q3B7I2 92 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 PDCD4Q53EL6 469 aaKnown RBP6.49□□□□□ -1.37
PTPRO-208ENST00000542557 RNF219Q5W0B1 726 aaPredicted RBP6.49□□□□□ -1.37
PTPRO-208ENST00000542557 BLOC1S3Q6QNY0 202 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 CHERPQ8IWX8 916 aaKnown RBP6.49□□□□□ -1.37
PTPRO-208ENST00000542557 PIANPQ8IYJ0 282 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 ANKFN1Q8N957 763 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 SNX31Q8N9S9 440 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 SLAIN1Q8ND83 568 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 OR56A4Q8NGH8 313 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 CD99L2Q8TCZ2 262 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 ZNF382Q96SR6 550 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 OSBPL11Q9BXB4 747 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 MRPS26Q9BYN8 205 aaKnown RBP6.49□□□□□ -1.37
PTPRO-208ENST00000542557 MUC3BQ9H195 1237 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 P2RY12Q9H244 342 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 SEMA4BQ9NPR2 832 aaPredicted RBP6.49□□□□□ -1.37
PTPRO-208ENST00000542557 LHX3Q9UBR4 397 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 CNOT6Q9ULM6 557 aaKnown RBP6.49□□□□□ -1.37
PTPRO-208ENST00000542557 PCDHB1Q9Y5F3 818 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 PTGDR2Q9Y5Y4 395 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 ZNF106Q9H2Y7 1883 aaKnown RBP6.49□□□□□ -1.37
PTPRO-208ENST00000542557 COL4A6Q14031 1691 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 A0A1W2PP18 115 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 GOLGA8CPA6NN73 597 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 NIPSNAP2O75323 286 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 ABLIM3O94929 683 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 C1RP00736 705 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 CXCL10P02778 98 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 CYBBP04839 570 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 FAM58BPP0C7Q3 252 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 BMP2P12643 396 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 ATP6V1B2P21281 511 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 OR1D2P34982 312 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 RPL5P46777 297 aaKnown RBP6.49□□□□□ -1.37
PTPRO-208ENST00000542557 TXNL4AP83876 142 aaKnown RBP6.49□□□□□ -1.37
PTPRO-208ENST00000542557 CDKL1Q00532 357 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 CACNG1Q06432 222 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 APOFQ13790 326 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 IKBKEQ14164 716 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 CWF19L1Q69YN2 538 aaKnown RBP6.49□□□□□ -1.37
PTPRO-208ENST00000542557 LAYNQ6UX15 382 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 CERS6Q6ZMG9 384 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 ERMP1Q7Z2K6 904 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 SYVN1Q86TM6 617 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 EGFL6Q8IUX8 553 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 SLC15A3Q8IY34 581 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 PACRGLQ8N7B6 248 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 SIDT2Q8NBJ9 832 aaKnown RBP6.49□□□□□ -1.37
PTPRO-208ENST00000542557 SPDYE1Q8NFV5 336 aaPredicted RBP6.49□□□□□ -1.37
PTPRO-208ENST00000542557 LINGO1Q96FE5 620 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 SLC30A3Q99726 388 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 SLC39A3Q9BRY0 314 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 ZBED2Q9BTP6 218 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 VN1R3Q9BXE9 311 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 CCM2LQ9NUG4 571 aaPredicted RBP6.49□□□□□ -1.37
PTPRO-208ENST00000542557 RIC8BQ9NVN3 520 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 ZIM2Q9NZV7 527 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms