RNA–Protein interactions for RNA: ENST00000542040.1

TRPT1-212, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 2

Gene TRPT1, Length 914 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-212ENST00000542040 LOC285095A0A1B0GVY8 99 aa17.25■□□□□ 0.35
TRPT1-212ENST00000542040 GOLGA6L6A8MZA4 724 aa17.25■□□□□ 0.35
TRPT1-212ENST00000542040 STMND1H3BQB6 276 aa17.25■□□□□ 0.35
TRPT1-212ENST00000542040 CDK14O94921 469 aa17.25■□□□□ 0.35
TRPT1-212ENST00000542040 TJP3O95049 919 aa17.25■□□□□ 0.35
TRPT1-212ENST00000542040 NDUFA10O95299 355 aa17.25■□□□□ 0.35
TRPT1-212ENST00000542040 VIPP01282 170 aa17.25■□□□□ 0.35
TRPT1-212ENST00000542040 HOXB3P14651 431 aaPredicted RBP17.25■□□□□ 0.35
TRPT1-212ENST00000542040 ZNF8P17098 575 aaPredicted RBP17.25■□□□□ 0.35
TRPT1-212ENST00000542040 GEMP55040 296 aa17.25■□□□□ 0.35
TRPT1-212ENST00000542040 WNT3AP56704 352 aa17.25■□□□□ 0.35
TRPT1-212ENST00000542040 ITGA9Q13797 1035 aa17.25■□□□□ 0.35
TRPT1-212ENST00000542040 DCAF12Q5T6F0 453 aa17.25■□□□□ 0.35
TRPT1-212ENST00000542040 PLXDC1Q8IUK5 500 aa17.25■□□□□ 0.35
TRPT1-212ENST00000542040 SFTPA2Q8IWL1 248 aa17.25■□□□□ 0.35
TRPT1-212ENST00000542040 RBM12BQ8IXT5 1001 aaKnown RBP17.25■□□□□ 0.35
TRPT1-212ENST00000542040 GPR26Q8NDV2 337 aa17.25■□□□□ 0.35
TRPT1-212ENST00000542040 PTCD2Q8WV60 388 aaKnown RBP17.25■□□□□ 0.35
TRPT1-212ENST00000542040 PATE1Q8WXA2 126 aa17.25■□□□□ 0.35
TRPT1-212ENST00000542040 WDR24Q96S15 920 aa17.25■□□□□ 0.35
TRPT1-212ENST00000542040 NUDT22Q9BRQ3 303 aa17.25■□□□□ 0.35
TRPT1-212ENST00000542040 ZPBPQ9BS86 351 aa17.25■□□□□ 0.35
TRPT1-212ENST00000542040 TIMM29Q9BSF4 260 aa17.25■□□□□ 0.35
TRPT1-212ENST00000542040 KLC4Q9NSK0 619 aa17.25■□□□□ 0.35
TRPT1-212ENST00000542040 SAE1Q9UBE0 346 aaPredicted RBP17.25■□□□□ 0.35
TRPT1-212ENST00000542040 PRKAB1Q9Y478 270 aa17.25■□□□□ 0.35
TRPT1-212ENST00000542040 OAS3Q9Y6K5 1087 aaKnown RBP17.25■□□□□ 0.35
TRPT1-212ENST00000542040 CACNA1GO43497 2377 aa17.25■□□□□ 0.35
TRPT1-212ENST00000542040 PRAMEF33A0A0G2JMD5 474 aa17.24■□□□□ 0.35
TRPT1-212ENST00000542040 GOLGA6L9A6NEM1 432 aa17.24■□□□□ 0.35
TRPT1-212ENST00000542040 C2orf81A6NN90 581 aa17.24■□□□□ 0.35
TRPT1-212ENST00000542040 PRAMEF10O60809 474 aa17.24■□□□□ 0.35
TRPT1-212ENST00000542040 PIRTP0C851 137 aa17.24■□□□□ 0.35
TRPT1-212ENST00000542040 ITIH1P19827 911 aa17.24■□□□□ 0.35
TRPT1-212ENST00000542040 NFKB1P19838 968 aa17.24■□□□□ 0.35
TRPT1-212ENST00000542040 IDSP22304 550 aa17.24■□□□□ 0.35
TRPT1-212ENST00000542040 SPAM1P38567 509 aa17.24■□□□□ 0.35
TRPT1-212ENST00000542040 HALP42357 657 aa17.24■□□□□ 0.35
TRPT1-212ENST00000542040 RWDD2BP57060 319 aa17.24■□□□□ 0.35
TRPT1-212ENST00000542040 PDE1BQ01064 536 aa17.24■□□□□ 0.35
TRPT1-212ENST00000542040 NFATC2Q13469 925 aa17.24■□□□□ 0.35
TRPT1-212ENST00000542040 LDLRAP1Q5SW96 308 aa17.24■□□□□ 0.35
TRPT1-212ENST00000542040 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.24■□□□□ 0.35
TRPT1-212ENST00000542040 NKAIN2Q5VXU1 208 aa17.24■□□□□ 0.35
TRPT1-212ENST00000542040 CYB5D1Q6P9G0 228 aa17.24■□□□□ 0.35
TRPT1-212ENST00000542040 BBS12Q6ZW61 710 aa17.24■□□□□ 0.35
TRPT1-212ENST00000542040 GLT6D1Q7Z4J2 308 aa17.24■□□□□ 0.35
TRPT1-212ENST00000542040 KIAA1328Q86T90 577 aa17.24■□□□□ 0.35
TRPT1-212ENST00000542040 CDKL3Q8IVW4 592 aaPredicted RBP17.24■□□□□ 0.35
TRPT1-212ENST00000542040 SYCE1Q8N0S2 351 aa17.24■□□□□ 0.35
TRPT1-212ENST00000542040 UBL4BQ8N7F7 174 aa17.24■□□□□ 0.35
TRPT1-212ENST00000542040 NCSTNQ92542 709 aa17.24■□□□□ 0.35
TRPT1-212ENST00000542040 QKIQ96PU8 341 aaKnown RBP eCLIP17.24■□□□□ 0.35
TRPT1-212ENST00000542040 DDA1Q9BW61 102 aa17.24■□□□□ 0.35
TRPT1-212ENST00000542040 UCK1Q9HA47 277 aa17.24■□□□□ 0.35
TRPT1-212ENST00000542040 UBP1Q9NZI7 540 aa17.24■□□□□ 0.35
TRPT1-212ENST00000542040 CPNE7Q9UBL6 633 aa17.24■□□□□ 0.35
TRPT1-212ENST00000542040 TBC1D29Q9UFV1 150 aa17.24■□□□□ 0.35
TRPT1-212ENST00000542040 PCDHGA3Q9Y5H0 932 aa17.24■□□□□ 0.35
TRPT1-212ENST00000542040 PCDHA3Q9Y5H8 950 aa17.24■□□□□ 0.35
TRPT1-212ENST00000542040 RP1P56715 2156 aa17.23■□□□□ 0.35
TRPT1-212ENST00000542040 LAMA5O15230 3695 aa17.23■□□□□ 0.35
TRPT1-212ENST00000542040 KLHL33A6NCF5 533 aa17.23■□□□□ 0.35
TRPT1-212ENST00000542040 BTNL10A8MVZ5 291 aa17.23■□□□□ 0.35
TRPT1-212ENST00000542040 B4E171 279 aa17.23■□□□□ 0.35
TRPT1-212ENST00000542040 CHUKO15111 745 aa17.23■□□□□ 0.35
TRPT1-212ENST00000542040 CASC3O15234 703 aaKnown RBP17.23■□□□□ 0.35
TRPT1-212ENST00000542040 THRAP10827 490 aa17.23■□□□□ 0.35
TRPT1-212ENST00000542040 SFTPCP11686 197 aa17.23■□□□□ 0.35
TRPT1-212ENST00000542040 PECAM1P16284 738 aaPredicted RBP17.23■□□□□ 0.35
TRPT1-212ENST00000542040 ZNF7P17097 686 aaPredicted RBP17.23■□□□□ 0.35
TRPT1-212ENST00000542040 BPIP17213 487 aa17.23■□□□□ 0.35
TRPT1-212ENST00000542040 XRCC1P18887 633 aaPredicted RBP17.23■□□□□ 0.35
TRPT1-212ENST00000542040 CTNNA1P35221 906 aaKnown RBP17.23■□□□□ 0.35
TRPT1-212ENST00000542040 TSPAN7P41732 249 aa17.23■□□□□ 0.35
TRPT1-212ENST00000542040 CFHR1Q03591 330 aa17.23■□□□□ 0.35
TRPT1-212ENST00000542040 WASHC5Q12768 1159 aa17.23■□□□□ 0.35
TRPT1-212ENST00000542040 C16orf72Q14CZ0 275 aa17.23■□□□□ 0.35
TRPT1-212ENST00000542040 ADGRG6Q86SQ4 1221 aa17.23■□□□□ 0.35
TRPT1-212ENST00000542040 FAM129CQ86XR2 697 aa17.23■□□□□ 0.35
TRPT1-212ENST00000542040 ZNF567Q8N184 647 aa17.23■□□□□ 0.35
TRPT1-212ENST00000542040 SLC25A41Q8N5S1 370 aa17.23■□□□□ 0.35
TRPT1-212ENST00000542040 SPC24Q8NBT2 197 aa17.23■□□□□ 0.35
TRPT1-212ENST00000542040 IPMKQ8NFU5 416 aa17.23■□□□□ 0.35
TRPT1-212ENST00000542040 SGF29Q96ES7 293 aa17.23■□□□□ 0.35
TRPT1-212ENST00000542040 ZNF514Q96K75 400 aaPredicted RBP17.23■□□□□ 0.35
TRPT1-212ENST00000542040 BBC3Q96PG8 261 aaPredicted RBP17.23■□□□□ 0.35
TRPT1-212ENST00000542040 ARHGAP9Q9BRR9 750 aa17.23■□□□□ 0.35
TRPT1-212ENST00000542040 EFHD1Q9BUP0 239 aa17.23■□□□□ 0.35
TRPT1-212ENST00000542040 HEMGNQ9BXL5 484 aa17.23■□□□□ 0.35
TRPT1-212ENST00000542040 SLC39A1Q9NY26 324 aa17.23■□□□□ 0.35
TRPT1-212ENST00000542040 ST14Q9Y5Y6 855 aa17.23■□□□□ 0.35
TRPT1-212ENST00000542040 DNMT3AQ9Y6K1 912 aaPredicted RBP17.23■□□□□ 0.35
TRPT1-212ENST00000542040 MACROD2A1Z1Q3 448 aa17.22■□□□□ 0.35
TRPT1-212ENST00000542040 PMS2P1A4D2B8 440 aa17.22■□□□□ 0.35
TRPT1-212ENST00000542040 PDZK1P1A8MUH7 402 aa17.22■□□□□ 0.35
TRPT1-212ENST00000542040 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.22■□□□□ 0.35
TRPT1-212ENST00000542040 STX7O15400 261 aaKnown RBP17.22■□□□□ 0.35
TRPT1-212ENST00000542040 AMD1P17707 334 aa17.22■□□□□ 0.35
TRPT1-212ENST00000542040 MAPK9P45984 424 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms