RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 PRR19A6NJB7 356 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 AGAP14A8MT82 685 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 NTN3O00634 580 aaPredicted RBP9.61□□□□□ -0.87
YBX3-212ENST00000542002 PPM1DO15297 605 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 B4GAT1O43505 415 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 SGTAO43765 313 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 KIF5CO60282 957 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 SRP72O76094 671 aaKnown RBP9.61□□□□□ -0.87
YBX3-212ENST00000542002 CDK14O94921 469 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 CRTAMO95727 393 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 CDK4P11802 303 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 ACP5P13686 325 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 PSMA3P25788 255 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 ACTR1BP42025 376 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 TNNT3P45378 269 aaPredicted RBP9.61□□□□□ -0.87
YBX3-212ENST00000542002 RPIAP49247 311 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 ARSDP51689 593 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 PDX1P52945 283 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 CTSCP53634 463 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 ACTR1AP61163 376 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 CCL7P80098 99 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 B4GALNT1Q00973 533 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 ILF3Q12906 894 aaKnown RBP eCLIP9.61□□□□□ -0.87
YBX3-212ENST00000542002 C14orf28Q4W4Y0 310 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 GPRC6AQ5T6X5 926 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 CRTC3Q6UUV7 619 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 XKR5Q6UX68 686 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 UNQ6494/PRO21346Q6UXR6 183 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 TMPRSS9Q7Z410 1059 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 GALNT15Q8N3T1 639 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 CCDC89Q8N998 374 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 Q8N9G6 341 aaPredicted RBP9.61□□□□□ -0.87
YBX3-212ENST00000542002 MAPK15Q8TD08 544 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 ACTRT1Q8TDG2 376 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 GLMNQ92990 594 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 ZNF778Q96MU6 729 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 PPP1R2P1Q96PQ5 205 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 RMI1Q9H9A7 625 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 CASS4Q9NQ75 786 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 PRDM8Q9NQV8 689 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 SCHIP1Q9P0W5 487 aaPredicted RBP9.61□□□□□ -0.87
YBX3-212ENST00000542002 PAK5Q9P286 719 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 LRIT1Q9P2V4 623 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 APPL1Q9UKG1 709 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 CLCA2Q9UQC9 943 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 PCDHB1Q9Y5F3 818 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.61□□□□□ -0.87
YBX3-212ENST00000542002 CELSR3Q9NYQ7 3312 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 PLXNB3Q9ULL4 1909 aa9.6□□□□□ -0.87
YBX3-212ENST00000542002 ZFHX4Q86UP3 3567 aa9.6□□□□□ -0.87
YBX3-212ENST00000542002 PRAMEF33A0A0G2JMD5 474 aa9.6□□□□□ -0.87
YBX3-212ENST00000542002 PMS2P1A4D2B8 440 aa9.6□□□□□ -0.87
YBX3-212ENST00000542002 OR51F1A6NGY5 319 aa9.6□□□□□ -0.87
YBX3-212ENST00000542002 PSMD3O43242 534 aa9.6□□□□□ -0.87
YBX3-212ENST00000542002 VEGFDO43915 354 aa9.6□□□□□ -0.87
YBX3-212ENST00000542002 PPFIA2O75334 1257 aa9.6□□□□□ -0.87
YBX3-212ENST00000542002 PRAMEF1O95521 474 aa9.6□□□□□ -0.87
YBX3-212ENST00000542002 APRTP07741 180 aa9.6□□□□□ -0.87
YBX3-212ENST00000542002 GLB1P16278 677 aa9.6□□□□□ -0.87
YBX3-212ENST00000542002 FDFT1P37268 417 aa9.6□□□□□ -0.87
YBX3-212ENST00000542002 COILP38432 576 aaPredicted RBP9.6□□□□□ -0.87
YBX3-212ENST00000542002 TERF1P54274 439 aa9.6□□□□□ -0.87
YBX3-212ENST00000542002 OR1D5P58170 312 aa9.6□□□□□ -0.87
YBX3-212ENST00000542002 GNG11P61952 73 aa9.6□□□□□ -0.87
YBX3-212ENST00000542002 NFATC2Q13469 925 aa9.6□□□□□ -0.87
YBX3-212ENST00000542002 LRP8Q14114 963 aa9.6□□□□□ -0.87
YBX3-212ENST00000542002 CYP1B1Q16678 543 aa9.6□□□□□ -0.87
YBX3-212ENST00000542002 PLA2G4EQ3MJ16 856 aa9.6□□□□□ -0.87
YBX3-212ENST00000542002 ZDHHC20Q5W0Z9 365 aa9.6□□□□□ -0.87
YBX3-212ENST00000542002 IYDQ6PHW0 289 aa9.6□□□□□ -0.87
YBX3-212ENST00000542002 GSTA5Q7RTV2 222 aa9.6□□□□□ -0.87
YBX3-212ENST00000542002 PHYKPLQ8IUZ5 450 aa9.6□□□□□ -0.87
YBX3-212ENST00000542002 PIANPQ8IYJ0 282 aa9.6□□□□□ -0.87
YBX3-212ENST00000542002 CACTIN-AS1Q8N1I8 211 aa9.6□□□□□ -0.87
YBX3-212ENST00000542002 BEND7Q8N7W2 519 aaPredicted RBP9.6□□□□□ -0.87
YBX3-212ENST00000542002 DDHD1Q8NEL9 900 aa9.6□□□□□ -0.87
YBX3-212ENST00000542002 MDM1Q8TC05 714 aa9.6□□□□□ -0.87
YBX3-212ENST00000542002 MAIP1Q8WWC4 291 aa9.6□□□□□ -0.87
YBX3-212ENST00000542002 MAGOHBQ96A72 148 aaKnown RBP9.6□□□□□ -0.87
YBX3-212ENST00000542002 SGF29Q96ES7 293 aa9.6□□□□□ -0.87
YBX3-212ENST00000542002 CDKN2AIPNLQ96HQ2 116 aa9.6□□□□□ -0.87
YBX3-212ENST00000542002 ABCG4Q9H172 646 aa9.6□□□□□ -0.87
YBX3-212ENST00000542002 ASB8Q9H765 288 aa9.6□□□□□ -0.87
YBX3-212ENST00000542002 HOMER3Q9NSC5 361 aa9.6□□□□□ -0.87
YBX3-212ENST00000542002 KLC4Q9NSK0 619 aa9.6□□□□□ -0.87
YBX3-212ENST00000542002 NLE1Q9NVX2 485 aaPredicted RBP9.6□□□□□ -0.87
YBX3-212ENST00000542002 SLC2A6Q9UGQ3 507 aa9.6□□□□□ -0.87
YBX3-212ENST00000542002 FEZ2Q9UHY8 353 aaPredicted RBP9.6□□□□□ -0.87
YBX3-212ENST00000542002 DMXL2Q8TDJ6 3036 aa9.59□□□□□ -0.87
YBX3-212ENST00000542002 OR2AG2A6NM03 316 aa9.59□□□□□ -0.87
YBX3-212ENST00000542002 ERI2A8K979 691 aaKnown RBP9.59□□□□□ -0.87
YBX3-212ENST00000542002 NUDT21O43809 227 aaKnown RBP9.59□□□□□ -0.87
YBX3-212ENST00000542002 SNX2O60749 519 aa9.59□□□□□ -0.87
YBX3-212ENST00000542002 AVILO75366 819 aa9.59□□□□□ -0.87
YBX3-212ENST00000542002 POP7O75817 140 aaKnown RBP9.59□□□□□ -0.87
YBX3-212ENST00000542002 RPLP0P05388 317 aaKnown RBP9.59□□□□□ -0.87
YBX3-212ENST00000542002 PROS1P07225 676 aa9.59□□□□□ -0.87
YBX3-212ENST00000542002 BRAFP15056 766 aa9.59□□□□□ -0.87
YBX3-212ENST00000542002 PNLIPP16233 465 aa9.59□□□□□ -0.87
YBX3-212ENST00000542002 ZNF7P17097 686 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms