RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 PABPC1P11940 636 aaKnown RBP9.08□□□□□ -0.96
THBS3-211ENST00000541990 TCF3P15923 654 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 GPX3P22352 226 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 PCSK1P29120 753 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 ALDH4A1P30038 563 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 RPS9P46781 194 aaKnown RBP9.08□□□□□ -0.96
THBS3-211ENST00000541990 HK2P52789 917 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 NKX2-5P52952 324 aaPredicted RBP9.08□□□□□ -0.96
THBS3-211ENST00000541990 PLA2G16P53816 162 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 FOXA1P55317 472 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 TSPY1Q01534 308 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 POLD3Q15054 466 aaPredicted RBP9.08□□□□□ -0.96
THBS3-211ENST00000541990 KIF19Q2TAC6 998 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 BTBD8Q5XKL5 378 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 KIAA1841Q6NSI8 718 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 BHLHA9Q7RTU4 235 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 STARD8Q92502 1023 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 CELF6Q96J87 481 aaKnown RBP9.08□□□□□ -0.96
THBS3-211ENST00000541990 IL12RB2Q99665 862 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 ACBD6Q9BR61 282 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 DGCR6LQ9BY27 220 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 ALOXE3Q9BYJ1 711 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 GIN1Q9NXP7 522 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.08□□□□□ -0.96
THBS3-211ENST00000541990 KLQ9UEF7 1012 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 ITGB1BP2Q9UKP3 347 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 KIAA1257Q9ULG3 409 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 ANKRD6Q9Y2G4 727 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 TRAF6Q9Y4K3 522 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 EEF2KO00418 725 aaKnown RBP9.08□□□□□ -0.96
THBS3-211ENST00000541990 KDM1AO60341 852 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 GFAPP14136 432 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 STMN1P16949 149 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 SLC6A2P23975 617 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 PSMA4P25789 261 aaKnown RBP9.08□□□□□ -0.96
THBS3-211ENST00000541990 KCNC1P48547 511 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 DAOAP59103 153 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 GRB7Q14451 532 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 SF3B4Q15427 424 aaKnown RBP eCLIP9.08□□□□□ -0.962e-6■■■■□ 19.9
THBS3-211ENST00000541990 PLA2G4EQ3MJ16 856 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 GTF2IRD2BQ6EKJ0 949 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 FAM171BQ6P995 826 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 USP51Q70EK9 711 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 PIWIL4Q7Z3Z4 852 aaKnown RBP9.08□□□□□ -0.96
THBS3-211ENST00000541990 NANOGNBQ7Z5D8 188 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 GTF2IRD2Q86UP8 949 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 THEM5Q8N1Q8 247 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 PACRGLQ8N7B6 248 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 ZFP90Q8TF47 636 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 SMARCD1Q96GM5 515 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 CENPNQ96H22 339 aaPredicted RBP9.08□□□□□ -0.96
THBS3-211ENST00000541990 SH3YL1Q96HL8 342 aaPredicted RBP9.08□□□□□ -0.96
THBS3-211ENST00000541990 TMEM74Q96NL1 305 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 KCNA7Q96RP8 456 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 YME1L1Q96TA2 773 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 PKMYT1Q99640 499 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 SLC30A3Q99726 388 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 C9orf16Q9BUW7 83 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 ATXN3LQ9H3M9 355 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 SLAMF8Q9P0V8 285 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 RAD54BQ9Y620 910 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 SLC30A1Q9Y6M5 507 aa9.08□□□□□ -0.96
THBS3-211ENST00000541990 NUP205Q92621 2012 aa9.07□□□□□ -0.96
THBS3-211ENST00000541990 NRG2O14511 850 aaPredicted RBP9.07□□□□□ -0.96
THBS3-211ENST00000541990 NDUFB5O43674 189 aa9.07□□□□□ -0.96
THBS3-211ENST00000541990 NOL3O60936 208 aaKnown RBP9.07□□□□□ -0.96
THBS3-211ENST00000541990 SEC14L2O76054 403 aa9.07□□□□□ -0.96
THBS3-211ENST00000541990 HTR1AP08908 422 aa9.07□□□□□ -0.96
THBS3-211ENST00000541990 MBL2P11226 248 aaPredicted RBP9.07□□□□□ -0.96
THBS3-211ENST00000541990 GJA1P17302 382 aa9.07□□□□□ -0.96
THBS3-211ENST00000541990 TCEA1P23193 301 aaKnown RBP9.07□□□□□ -0.96
THBS3-211ENST00000541990 RFC2P35250 354 aa9.07□□□□□ -0.96
THBS3-211ENST00000541990 CHRNA4P43681 627 aa9.07□□□□□ -0.96
THBS3-211ENST00000541990 WDR5P61964 334 aaKnown RBP9.07□□□□□ -0.96
THBS3-211ENST00000541990 ADARB1P78563 741 aaKnown RBP9.07□□□□□ -0.96
THBS3-211ENST00000541990 CLCQ05315 142 aa9.07□□□□□ -0.96
THBS3-211ENST00000541990 GRSF1Q12849 480 aaKnown RBP eCLIP9.07□□□□□ -0.96
THBS3-211ENST00000541990 MAPRE2Q15555 327 aa9.07□□□□□ -0.96
THBS3-211ENST00000541990 MAPK11Q15759 364 aa9.07□□□□□ -0.96
THBS3-211ENST00000541990 IMPG1Q17R60 797 aa9.07□□□□□ -0.96
THBS3-211ENST00000541990 FUT11Q495W5 492 aa9.07□□□□□ -0.96
THBS3-211ENST00000541990 FBXO48Q5FWF7 155 aa9.07□□□□□ -0.96
THBS3-211ENST00000541990 ARHGAP36Q6ZRI8 547 aa9.07□□□□□ -0.96
THBS3-211ENST00000541990 LARP4Q71RC2 724 aaKnown RBP eCLIP9.07□□□□□ -0.96
THBS3-211ENST00000541990 NECAB2Q7Z6G3 386 aa9.07□□□□□ -0.96
THBS3-211ENST00000541990 TAC4Q86UU9 113 aa9.07□□□□□ -0.96
THBS3-211ENST00000541990 SCAIQ8N9R8 606 aa9.07□□□□□ -0.96
THBS3-211ENST00000541990 DNAJB14Q8TBM8 379 aa9.07□□□□□ -0.96
THBS3-211ENST00000541990 SLC22A17Q8WUG5 538 aa9.07□□□□□ -0.96
THBS3-211ENST00000541990 ANKRD49Q8WVL7 239 aa9.07□□□□□ -0.96
THBS3-211ENST00000541990 EXT2Q93063 718 aa9.07□□□□□ -0.96
THBS3-211ENST00000541990 ITPKCQ96DU7 683 aa9.07□□□□□ -0.96
THBS3-211ENST00000541990 TDRD1Q9BXT4 1180 aaKnown RBP9.07□□□□□ -0.96
THBS3-211ENST00000541990 KLHL25Q9H0H3 589 aa9.07□□□□□ -0.96
THBS3-211ENST00000541990 CWH43Q9H720 699 aa9.07□□□□□ -0.96
THBS3-211ENST00000541990 AKTIPQ9H8T0 292 aa9.07□□□□□ -0.96
THBS3-211ENST00000541990 MRPL40Q9NQ50 206 aaKnown RBP9.07□□□□□ -0.96
THBS3-211ENST00000541990 EXD2Q9NVH0 621 aa9.07□□□□□ -0.96
THBS3-211ENST00000541990 GMIPQ9P107 970 aa9.07□□□□□ -0.96
THBS3-211ENST00000541990 TMEM98Q9Y2Y6 226 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms