RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 PM20D1Q6GTS8 502 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 ERAP2Q6P179 960 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 MZT2AQ6P582 158 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 RBM43Q6ZSC3 357 aaKnown RBP5.54□□□□□ -1.52
CPSF7-220ENST00000541963 MICALCLQ6ZW33 695 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 TTC30AQ86WT1 665 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 ARHGEF19Q8IW93 802 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 SCML4Q8N228 414 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 GPT2Q8TD30 523 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 ZNF483Q8TF39 744 aaPredicted RBP5.54□□□□□ -1.52
CPSF7-220ENST00000541963 SLC35F5Q8WV83 523 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 ZNF606Q8WXB4 792 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 IRGQQ8WZA9 623 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 SECISBP2LQ93073 1101 aaKnown RBP5.54□□□□□ -1.52
CPSF7-220ENST00000541963 TMEM125Q96AQ2 219 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 WWC2-AS2Q96NR7 200 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 CRACR2AQ9BSW2 395 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 ALOXE3Q9BYJ1 711 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 STK33Q9BYT3 514 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 ULBP1Q9BZM6 244 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 TSPYL1Q9H0U9 437 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 NMUR1Q9HB89 426 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 ABCC13Q9NSE7 274 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 MRPS18AQ9NVS2 196 aaKnown RBP5.54□□□□□ -1.52
CPSF7-220ENST00000541963 RASAL2Q9UJF2 1139 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 DNAJC12Q9UKB3 198 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 SLC8A2Q9UPR5 921 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 CNTN6Q9UQ52 1028 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 NFE2L3Q9Y4A8 694 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 TRGV11A0A075B6L2 103 aa5.53□□□□□ -1.52
CPSF7-220ENST00000541963 TBC1D3BA6NDS4 549 aa5.53□□□□□ -1.52
CPSF7-220ENST00000541963 SHISA7A6NL88 538 aa5.53□□□□□ -1.52
CPSF7-220ENST00000541963 AHRRA9YTQ3 701 aa5.53□□□□□ -1.52
CPSF7-220ENST00000541963 CAPN9O14815 690 aa5.53□□□□□ -1.52
CPSF7-220ENST00000541963 DCLK1O15075 740 aa5.53□□□□□ -1.52
CPSF7-220ENST00000541963 CREB3O43889 395 aa5.53□□□□□ -1.52
CPSF7-220ENST00000541963 FAM20BO75063 409 aa5.53□□□□□ -1.52
CPSF7-220ENST00000541963 COQ9O75208 318 aa5.53□□□□□ -1.52
CPSF7-220ENST00000541963 PIAS2O75928 621 aa5.53□□□□□ -1.52
CPSF7-220ENST00000541963 NCR1O76036 304 aa5.53□□□□□ -1.52
CPSF7-220ENST00000541963 NDUFA10O95299 355 aa5.53□□□□□ -1.52
CPSF7-220ENST00000541963 PAPSS2O95340 614 aaPredicted RBP5.53□□□□□ -1.52
CPSF7-220ENST00000541963 TBX18O95935 607 aa5.53□□□□□ -1.52
CPSF7-220ENST00000541963 LMNAP02545 664 aaKnown RBP5.53□□□□□ -1.52
CPSF7-220ENST00000541963 TNFRSF4P43489 277 aa5.53□□□□□ -1.52
CPSF7-220ENST00000541963 ZNF132P52740 706 aa5.53□□□□□ -1.52
CPSF7-220ENST00000541963 MRPS21P82921 87 aaKnown RBP5.53□□□□□ -1.52
CPSF7-220ENST00000541963 ZXDBP98169 803 aa5.53□□□□□ -1.52
CPSF7-220ENST00000541963 MYL5Q02045 173 aa5.53□□□□□ -1.52
CPSF7-220ENST00000541963 DMTNQ08495 405 aa5.53□□□□□ -1.52
CPSF7-220ENST00000541963 ADIGQ0VDE8 80 aa5.53□□□□□ -1.52
CPSF7-220ENST00000541963 TUBB3Q13509 450 aa5.53□□□□□ -1.52
CPSF7-220ENST00000541963 CD300EQ496F6 205 aaPredicted RBP5.53□□□□□ -1.52
CPSF7-220ENST00000541963 INO80DQ53TQ3 878 aaPredicted RBP5.53□□□□□ -1.52
CPSF7-220ENST00000541963 BSPRYQ5W0U4 402 aa5.53□□□□□ -1.52
CPSF7-220ENST00000541963 PLAG1Q6DJT9 500 aa5.53□□□□□ -1.52
CPSF7-220ENST00000541963 PMF1Q6P1K2 205 aa5.53□□□□□ -1.52
CPSF7-220ENST00000541963 RHBDF2Q6PJF5 856 aa5.53□□□□□ -1.52
CPSF7-220ENST00000541963 TTLL10Q6ZVT0 673 aa5.53□□□□□ -1.52
CPSF7-220ENST00000541963 TRMT11Q7Z4G4 463 aaKnown RBP5.53□□□□□ -1.52
CPSF7-220ENST00000541963 SCD5Q86SK9 330 aa5.53□□□□□ -1.52
CPSF7-220ENST00000541963 ZNF354CQ86Y25 554 aa5.53□□□□□ -1.52
CPSF7-220ENST00000541963 KRT73Q86Y46 540 aa5.53□□□□□ -1.52
CPSF7-220ENST00000541963 UNC45BQ8IWX7 931 aa5.53□□□□□ -1.52
CPSF7-220ENST00000541963 TFAP2BQ92481 460 aa5.53□□□□□ -1.52
CPSF7-220ENST00000541963 DDX50Q9BQ39 737 aaKnown RBP5.53□□□□□ -1.52
CPSF7-220ENST00000541963 MIS12Q9H081 205 aa5.53□□□□□ -1.52
CPSF7-220ENST00000541963 PRMT8Q9NR22 394 aaPredicted RBP5.53□□□□□ -1.52
CPSF7-220ENST00000541963 SPHK2Q9NRA0 654 aa5.53□□□□□ -1.52
CPSF7-220ENST00000541963 SAMSN1Q9NSI8 373 aaKnown RBP5.53□□□□□ -1.52
CPSF7-220ENST00000541963 TMEM51Q9NW97 253 aa5.53□□□□□ -1.52
CPSF7-220ENST00000541963 DEC1Q9P2X7 70 aa5.53□□□□□ -1.52
CPSF7-220ENST00000541963 PRDM4Q9UKN5 801 aa5.53□□□□□ -1.52
CPSF7-220ENST00000541963 RAB23Q9ULC3 237 aa5.53□□□□□ -1.52
CPSF7-220ENST00000541963 HBS1LQ9Y450 684 aaKnown RBP5.53□□□□□ -1.52
CPSF7-220ENST00000541963 TESMINQ9Y4I5 508 aa5.53□□□□□ -1.52
CPSF7-220ENST00000541963 CUL9Q8IWT3 2517 aa5.53□□□□□ -1.52
CPSF7-220ENST00000541963 BDP1A6H8Y1 2624 aa5.53□□□□□ -1.52
CPSF7-220ENST00000541963 HELZP42694 1942 aaKnown RBP5.52□□□□□ -1.53
CPSF7-220ENST00000541963 BECN2A8MW95 431 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 TULP2O00295 520 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 HOXC11O43248 304 aaPredicted RBP5.52□□□□□ -1.53
CPSF7-220ENST00000541963 KAT7O95251 611 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 LATS1O95835 1130 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 EGFP01133 1207 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 CSTBP04080 98 aaKnown RBP5.52□□□□□ -1.53
CPSF7-220ENST00000541963 HMBSP08397 361 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 CCDC172P0C7W6 258 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 CORO1AP31146 461 aaKnown RBP5.52□□□□□ -1.53
CPSF7-220ENST00000541963 HOXA6P31267 233 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 GPD2P43304 727 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 RGS7P49802 495 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 DGKEP52429 567 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 ITGA8P53708 1063 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 DAOAP59103 153 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 TPM4P67936 248 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 MTA1Q13330 715 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 RAPGEF1Q13905 1077 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 BOP1Q14137 746 aaKnown RBP5.52□□□□□ -1.53
CPSF7-220ENST00000541963 NRN1LQ496H8 165 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms