RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 ALCAMQ13740 583 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 SHBQ15464 509 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 HSPB2Q16082 182 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 KRT24Q2M2I5 525 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 USP41Q3LFD5 358 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 MIDNQ504T8 468 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 CCDC92Q53HC0 331 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-217ENST00000541578 KIAA1755Q5JYT7 1200 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 KRT39Q6A163 491 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 ISM2Q6H9L7 571 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 MFSD6Q6ZSS7 791 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 BHLHA9Q7RTU4 235 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 ADCK2Q7Z695 626 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 PALB2Q86YC2 1186 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 ZDHHC17Q8IUH5 632 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 NUP93Q8N1F7 819 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 LRRC57Q8N9N7 239 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 OR8K5Q8NH50 307 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 HUS1BQ8NHY5 278 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 ZNF622Q969S3 477 aaKnown RBP eCLIP4.26□□□□□ -1.73
SNHG1-217ENST00000541578 RRNAD1Q96FB5 475 aaKnown RBP4.26□□□□□ -1.73
SNHG1-217ENST00000541578 NLRP4Q96MN2 994 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 OR2A14Q96R47 310 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 FIZ1Q96SL8 496 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 FERMT1Q9BQL6 677 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 THUMPD3Q9BV44 507 aaKnown RBP4.26□□□□□ -1.73
SNHG1-217ENST00000541578 OPA3Q9H6K4 179 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 XAB2Q9HCS7 855 aaKnown RBP4.26□□□□□ -1.73
SNHG1-217ENST00000541578 SELENONQ9NZV5 590 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 MSRB1Q9NZV6 116 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 COPG2Q9UBF2 871 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 ANAPC2Q9UJX6 822 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 AGO2Q9UKV8 859 aaKnown RBP4.26□□□□□ -1.73
SNHG1-217ENST00000541578 SLC4A4Q9Y6R1 1079 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 ADAMTS13Q76LX8 1427 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 ADGRL3Q9HAR2 1447 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 NWD2Q9ULI1 1742 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 RPGRIP1LQ68CZ1 1315 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 PTPN23Q9H3S7 1636 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 TCRBV21S2A2A0A5A6 115 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 FAM90A8PA6NJQ4 464 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 B4DGG1 531 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 ZNF814B7Z6K7 855 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 H0Y626 953 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 OGG1O15527 345 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 JRKO75564 520 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 PSMD10O75832 226 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 NEURL1O76050 574 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 FAM90A13PP0C7W8 464 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 FAM90A24PP0C7X0 464 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 CBSLP0DN79 551 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 VPREB1P12018 145 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 ATP6V1B1P15313 513 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 CD58P19256 250 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 CBSP35520 551 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 ALDH7A1P49419 539 aaKnown RBP4.25□□□□□ -1.73
SNHG1-217ENST00000541578 ARSEP51690 589 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 TMPRSS3P57727 454 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 TMF1P82094 1093 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 SCN1BQ07699 218 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 CAPSQ13938 189 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 PLEKHO1Q53GL0 409 aaPredicted RBP4.25□□□□□ -1.73
SNHG1-217ENST00000541578 ZNF628Q5EBL2 1059 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 PRAMEF19Q5SWL8 479 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 TBC1D9BQ66K14 1250 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 RAPH1Q70E73 1250 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 PLPPR4Q7Z2D5 763 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 HAPLN4Q86UW8 402 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 DENND6AQ8IWF6 608 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 UNC45BQ8IWX7 931 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 ZDHHC23Q8IYP9 409 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 CEP57L1Q8IYX8 460 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 SCYL3Q8IZE3 742 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 SLC25A41Q8N5S1 370 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 PARP16Q8N5Y8 322 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 ZBTB2Q8N680 514 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 HORMAD2Q8N7B1 307 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 ARL10Q8N8L6 244 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.25□□□□□ -1.73
SNHG1-217ENST00000541578 BEST2Q8NFU1 509 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 TSPAN14Q8NG11 270 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 OR4N2Q8NGD1 307 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 OR14L1PQ8NHC6 308 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 KAT2AQ92830 837 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 SLC25A28Q96A46 364 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 CLMNQ96JQ2 1002 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 SLITRK1Q96PX8 696 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 FNBP1Q96RU3 617 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 SEPT5Q99719 369 aaPredicted RBP4.25□□□□□ -1.73
SNHG1-217ENST00000541578 PCGF1Q9BSM1 259 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 MRPL9Q9BYD2 267 aaKnown RBP4.25□□□□□ -1.73
SNHG1-217ENST00000541578 LHPPQ9H008 270 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 FAM234AQ9H0X4 552 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 RNF146Q9NTX7 359 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 ZBTB40Q9NUA8 1239 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 DECR2Q9NUI1 292 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 WDR35Q9P2L0 1181 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 MTRRQ9UBK8 725 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 PLEKHB1Q9UF11 243 aaPredicted RBP4.25□□□□□ -1.73
SNHG1-217ENST00000541578 NDRG3Q9UGV2 375 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms