RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 CYP27C1Q4G0S4 372 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 CBWD6Q4V339 395 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 CBWD3Q5JTY5 395 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 SH2D4BQ5SQS7 431 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 STRIP1Q5VSL9 837 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 SLC9A4Q6AI14 798 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 TTC19Q6DKK2 380 aaPredicted RBP5.53□□□□□ -1.52
DDB1-219ENST00000541513 PAOXQ6QHF9 649 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 TSSK4Q6SA08 328 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 C1orf229Q6ZS94 237 aaPredicted RBP5.53□□□□□ -1.52
DDB1-219ENST00000541513 CENPVQ7Z7K6 275 aaPredicted RBP5.53□□□□□ -1.52
DDB1-219ENST00000541513 AACSQ86V21 672 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 ZNF410Q86VK4 478 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 CCDC65Q8IXS2 484 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 PM20D2Q8IYS1 436 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 SPARTQ8N0X7 666 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 GPC2Q8N158 579 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 SLC24A4Q8NFF2 622 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 OR8K5Q8NH50 307 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 ZNF671Q8TAW3 534 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 MDM1Q8TC05 714 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.53□□□□□ -1.52
DDB1-219ENST00000541513 PPP2R3CQ969Q6 453 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 SNRNP40Q96DI7 357 aaKnown RBP5.53□□□□□ -1.52
DDB1-219ENST00000541513 ELMOD3Q96FG2 381 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 HES6Q96HZ4 224 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 BTBD6Q96KE9 485 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 GDAP1L1Q96MZ0 367 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 RAD9AQ99638 391 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 DPYSL5Q9BPU6 564 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 C17orf80Q9BSJ5 609 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 MRI1Q9BV20 369 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 CARD6Q9BX69 1037 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 OSBPL8Q9BZF1 889 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 NUAK2Q9H093 628 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 RNF32Q9H0A6 362 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 LRRC40Q9H9A6 602 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 DLL4Q9NR61 685 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 ASAH2Q9NR71 780 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 MRPS18AQ9NVS2 196 aaKnown RBP5.53□□□□□ -1.52
DDB1-219ENST00000541513 SMPD3Q9NY59 655 aaPredicted RBP5.53□□□□□ -1.52
DDB1-219ENST00000541513 DDX25Q9UHL0 483 aaKnown RBP5.53□□□□□ -1.52
DDB1-219ENST00000541513 RAPGEFL1Q9UHV5 662 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 DBNLQ9UJU6 430 aaKnown RBP5.53□□□□□ -1.52
DDB1-219ENST00000541513 RAB21Q9UL25 225 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 MTUS1Q9ULD2 1270 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 A4GNTQ9UNA3 340 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 MYO3BQ8WXR4 1341 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 SALL1Q9NSC2 1324 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 CDK5RAP2Q96SN8 1893 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 A0A0G2JNJ9 132 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 SH3D21A4FU49 640 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 TRIM49BA6NDI0 452 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 ZSCAN5BA6NJL1 495 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 SDR42E2A6NKP2 422 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 E9PBE3 544 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 POLR2DO15514 142 aaKnown RBP5.52□□□□□ -1.53
DDB1-219ENST00000541513 PJA2O43164 708 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 BUB1O43683 1085 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 ERLIN1O75477 346 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 RAD17O75943 681 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 WDR47O94967 919 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 KAT7O95251 611 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 TRUB2O95900 331 aaKnown RBP5.52□□□□□ -1.53
DDB1-219ENST00000541513 IL18BPO95998 194 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 ITGB1P05556 798 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 CELA2BP08218 269 aaPredicted RBP5.52□□□□□ -1.53
DDB1-219ENST00000541513 VIMP08670 466 aaKnown RBP5.52□□□□□ -1.53
DDB1-219ENST00000541513 HOXB5P09067 269 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 TPM1P09493 284 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 C8orf89P0DMQ9 161 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 HK1P19367 917 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 CDH3P22223 829 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 GABRB2P47870 512 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 EFNA5P52803 228 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 F2RL1P55085 397 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 UCP2P55851 309 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 HAND2P61296 217 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 CTAG1AP78358 180 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 SPIBQ01892 262 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 GFPT1Q06210 699 aaPredicted RBP5.52□□□□□ -1.53
DDB1-219ENST00000541513 CDK18Q07002 472 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 MTAPQ13126 283 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 RRP1BQ14684 758 aaKnown RBP5.52□□□□□ -1.53
DDB1-219ENST00000541513 CYP2A13Q16696 494 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 PTCHD3Q3KNS1 767 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 ZSCAN23Q3MJ62 389 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 CERCAMQ5T4B2 595 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 ANKRD40Q6AI12 368 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 NAPEPLDQ6IQ20 393 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 KIAA1324Q6UXG2 1013 aaKnown RBP5.52□□□□□ -1.53
DDB1-219ENST00000541513 MTSS1LQ765P7 747 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 CCDC80Q76M96 950 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 CENPQQ7L2Z9 268 aaPredicted RBP5.52□□□□□ -1.53
DDB1-219ENST00000541513 TAOK1Q7L7X3 1001 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 GSTA5Q7RTV2 222 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 SPATA21Q7Z572 469 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 MFN1Q8IWA4 741 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 MCEMP1Q8IX19 187 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 BATF2Q8N1L9 274 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms