RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 FBXO5Q9UKT4 447 aa9.26□□□□□ -0.93
DDX55-208ENST00000541259 OAS3Q9Y6K5 1087 aaKnown RBP9.26□□□□□ -0.93
DDX55-208ENST00000541259 EXOC1LA0A1B0GW35 172 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 A0A1W2PPC4 97 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 NUDT17P0C025 328 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 OGNP20774 298 aaKnown RBP9.25□□□□□ -0.93
DDX55-208ENST00000541259 HNRNPA2B1P22626 353 aaKnown RBP9.25□□□□□ -0.93
DDX55-208ENST00000541259 ACRV1P26436 265 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 TRIM23P36406 574 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 PTGER3P43115 390 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 B4GALNT1Q00973 533 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 ITGA9Q13797 1035 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 PDE1CQ14123 709 aaPredicted RBP9.25□□□□□ -0.93
DDX55-208ENST00000541259 STAT4Q14765 748 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 ZNF528Q3MIS6 628 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 GPR33Q49SQ1 333 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 TPRG1LQ5T0D9 272 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 GPRC6AQ5T6X5 926 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 MRNIPQ6NTE8 343 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 ZNF449Q6P9G9 518 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 CNSTQ6PJW8 725 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 ADAMTSL4Q6UY14 1074 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 PACS1Q6VY07 963 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 GCNT7Q6ZNI0 430 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 MARK2Q7KZI7 788 aaKnown RBP9.25□□□□□ -0.93
DDX55-208ENST00000541259 STRA8Q7Z7C7 330 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 SDCCAG8Q86SQ7 713 aaPredicted RBP9.25□□□□□ -0.93
DDX55-208ENST00000541259 HEATR4Q86WZ0 1026 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 NXPE1Q8N323 547 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 CADM4Q8NFZ8 388 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 CALML6Q8TD86 181 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 DTX3LQ8TDB6 740 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 EPS8L3Q8TE67 593 aaKnown RBP9.25□□□□□ -0.93
DDX55-208ENST00000541259 DCAKDQ8WVC6 231 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 BTN2A2Q8WVV5 523 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 GAB3Q8WWW8 586 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 GLYATL1Q969I3 302 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 HSPA12BQ96MM6 686 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 PAFAH2Q99487 392 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 FAM167BQ9BTA0 163 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 MCMBPQ9BTE3 642 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 APOOQ9BUR5 198 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 DUSP15Q9H1R2 295 aaPredicted RBP9.25□□□□□ -0.93
DDX55-208ENST00000541259 PLSCR2Q9NRY7 297 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 KCTD5Q9NXV2 234 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 CTNNAL1Q9UBT7 734 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 EIF2B4Q9UI10 523 aaKnown RBP9.25□□□□□ -0.93
DDX55-208ENST00000541259 CRYL1Q9Y2S2 319 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 OR1A2Q9Y585 309 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 PRSS21Q9Y6M0 314 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 ARHGEF17Q96PE2 2063 aaPredicted RBP9.25□□□□□ -0.93
DDX55-208ENST00000541259 DMDP11532 3685 aa9.25□□□□□ -0.93
DDX55-208ENST00000541259 CACNA1EQ15878 2313 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 TLDC2A0PJX2 215 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 SMIM23A6NLE4 172 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 MEI4A8MW99 385 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 FOXO6A8MYZ6 492 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 PRAMEF26H0Y7S4 382 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 DYNC1I1O14576 645 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 FPGTO14772 594 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 NDUFS3O75489 264 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 SASH3O75995 380 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 SLC25A14O95258 325 aaPredicted RBP9.24□□□□□ -0.93
DDX55-208ENST00000541259 CD27P26842 260 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 PMLP29590 882 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 FMO4P31512 558 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 AKT2P31751 481 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 MSH2P43246 934 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 SLCO1A2P46721 670 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 LEPRP48357 1165 aaKnown RBP9.24□□□□□ -0.93
DDX55-208ENST00000541259 POLD2P49005 469 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 PGGT1BP53609 377 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 CDK3Q00526 305 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 TYSND1Q2T9J0 566 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 KLHL38Q2WGJ6 581 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 PLK5Q496M5 336 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 KCTD16Q68DU8 428 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 ZNF549Q6P9A3 640 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 HDXQ7Z353 690 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 SLC26A11Q86WA9 606 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 LRRC6Q86X45 466 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 LMNTD2Q8IXW0 634 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 CYP4X1Q8N118 509 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 TMEM145Q8NBT3 493 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 DENND6BQ8NEG7 585 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 DDHD1Q8NEL9 900 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 ACVR1CQ8NER5 493 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 GDAP1Q8TB36 358 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 SLC44A1Q8WWI5 657 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 LPGAT1Q92604 370 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 CDKL2Q92772 493 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 ULK4Q96C45 1275 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 ATXN7L3BQ96GX2 97 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 COX14Q96I36 57 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 HIC2Q96JB3 615 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 SERAC1Q96JX3 654 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 SLC6A18Q96N87 628 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 VPS35Q96QK1 796 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 LRFN3Q9BTN0 628 aa9.24□□□□□ -0.93
DDX55-208ENST00000541259 DHRS4Q9BTZ2 278 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms