RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 CDC20Q12834 499 aa23.68■■□□□ 1.38
LEMD3-203ENST00000541171 PCSK7Q16549 785 aa23.68■■□□□ 1.38
LEMD3-203ENST00000541171 H2AFVQ71UI9 128 aa23.68■■□□□ 1.38
LEMD3-203ENST00000541171 PLXDC1Q8IUK5 500 aa23.68■■□□□ 1.38
LEMD3-203ENST00000541171 CTNNBL1Q8WYA6 563 aaPredicted RBP23.68■■□□□ 1.38
LEMD3-203ENST00000541171 EFHD1Q9BUP0 239 aa23.68■■□□□ 1.38
LEMD3-203ENST00000541171 BRD8Q9H0E9 1235 aa23.68■■□□□ 1.38
LEMD3-203ENST00000541171 EPB41L1Q9H4G0 881 aa23.68■■□□□ 1.38
LEMD3-203ENST00000541171 TRIM39Q9HCM9 518 aa23.68■■□□□ 1.38
LEMD3-203ENST00000541171 ZNF71Q9NQZ8 489 aaPredicted RBP23.68■■□□□ 1.38
LEMD3-203ENST00000541171 NENFQ9UMX5 172 aa23.68■■□□□ 1.38
LEMD3-203ENST00000541171 DNAJC16Q9Y2G8 782 aa23.68■■□□□ 1.38
LEMD3-203ENST00000541171 BSNQ9UPA5 3926 aa23.68■■□□□ 1.38
LEMD3-203ENST00000541171 LRRD1A4D1F6 860 aa23.67■■□□□ 1.38
LEMD3-203ENST00000541171 MTA2O94776 668 aa23.67■■□□□ 1.38
LEMD3-203ENST00000541171 CASP14P31944 242 aa23.67■■□□□ 1.38
LEMD3-203ENST00000541171 UBE2IP63279 158 aaKnown RBP23.67■■□□□ 1.38
LEMD3-203ENST00000541171 IFI35P80217 286 aaPredicted RBP23.67■■□□□ 1.38
LEMD3-203ENST00000541171 PPIDQ08752 370 aaKnown RBP23.67■■□□□ 1.38
LEMD3-203ENST00000541171 ABHD18Q0P651 414 aa23.67■■□□□ 1.38
LEMD3-203ENST00000541171 MESDQ14696 234 aa23.67■■□□□ 1.38
LEMD3-203ENST00000541171 SEPT7Q16181 437 aaKnown RBP23.67■■□□□ 1.38
LEMD3-203ENST00000541171 INSCQ1MX18 579 aa23.67■■□□□ 1.38
LEMD3-203ENST00000541171 DEFB109BQ30KR1 87 aa23.67■■□□□ 1.38
LEMD3-203ENST00000541171 C16orf46Q6P387 395 aa23.67■■□□□ 1.38
LEMD3-203ENST00000541171 ADGRG6Q86SQ4 1221 aa23.67■■□□□ 1.38
LEMD3-203ENST00000541171 TRIM48Q8IWZ4 208 aa23.67■■□□□ 1.38
LEMD3-203ENST00000541171 IQCDQ96DY2 449 aa23.67■■□□□ 1.38
LEMD3-203ENST00000541171 AGAP3Q96P47 875 aa23.67■■□□□ 1.38
LEMD3-203ENST00000541171 SLC23A2Q9UGH3 650 aa23.67■■□□□ 1.38
LEMD3-203ENST00000541171 TUBD1Q9UJT1 453 aa23.67■■□□□ 1.38
LEMD3-203ENST00000541171 TMEM184BQ9Y519 407 aaPredicted RBP23.67■■□□□ 1.38
LEMD3-203ENST00000541171 ADGRG1Q9Y653 693 aa23.67■■□□□ 1.38
LEMD3-203ENST00000541171 SYCE3A1L190 88 aa23.66■■□□□ 1.38
LEMD3-203ENST00000541171 LILRA5A6NI73 299 aa23.66■■□□□ 1.38
LEMD3-203ENST00000541171 VIPP01282 170 aa23.66■■□□□ 1.38
LEMD3-203ENST00000541171 OAS2P29728 719 aaKnown RBP23.66■■□□□ 1.38
LEMD3-203ENST00000541171 ATP1A1-AS1Q5TC04 95 aa23.66■■□□□ 1.38
LEMD3-203ENST00000541171 PLD5Q8N7P1 536 aa23.66■■□□□ 1.38
LEMD3-203ENST00000541171 AVL9Q8NBF6 648 aa23.66■■□□□ 1.38
LEMD3-203ENST00000541171 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.66■■□□□ 1.38
LEMD3-203ENST00000541171 TGM7Q96PF1 710 aa23.66■■□□□ 1.38
LEMD3-203ENST00000541171 ZSCAN5AQ9BUG6 496 aa23.66■■□□□ 1.38
LEMD3-203ENST00000541171 GPR63Q9BZJ6 419 aa23.66■■□□□ 1.38
LEMD3-203ENST00000541171 TRIT1Q9H3H1 467 aaKnown RBP23.66■■□□□ 1.38
LEMD3-203ENST00000541171 OGFRQ9NZT2 677 aa23.66■■□□□ 1.38
LEMD3-203ENST00000541171 IFNKQ9P0W0 207 aa23.66■■□□□ 1.38
LEMD3-203ENST00000541171 PDZK1P1A8MUH7 402 aa23.65■■□□□ 1.38
LEMD3-203ENST00000541171 MTX2O75431 263 aa23.65■■□□□ 1.38
LEMD3-203ENST00000541171 DLGAP3O95886 979 aa23.65■■□□□ 1.38
LEMD3-203ENST00000541171 AMD1P17707 334 aa23.65■■□□□ 1.38
LEMD3-203ENST00000541171 SEPHS1P49903 392 aa23.65■■□□□ 1.38
LEMD3-203ENST00000541171 CLCNKAP51800 687 aa23.65■■□□□ 1.38
LEMD3-203ENST00000541171 NPNTQ6UXI9 565 aa23.65■■□□□ 1.38
LEMD3-203ENST00000541171 TMEM26Q6ZUK4 368 aa23.65■■□□□ 1.38
LEMD3-203ENST00000541171 B4GALNT4Q76KP1 1039 aa23.65■■□□□ 1.38
LEMD3-203ENST00000541171 TMC3Q7Z5M5 1100 aa23.65■■□□□ 1.38
LEMD3-203ENST00000541171 NT5DC3Q86UY8 548 aa23.65■■□□□ 1.38
LEMD3-203ENST00000541171 TRAM1L1Q8N609 369 aa23.65■■□□□ 1.38
LEMD3-203ENST00000541171 C9orf43Q8TAL5 461 aaPredicted RBP23.65■■□□□ 1.38
LEMD3-203ENST00000541171 STARD8Q92502 1023 aa23.65■■□□□ 1.38
LEMD3-203ENST00000541171 GLYATL1Q969I3 302 aa23.65■■□□□ 1.38
LEMD3-203ENST00000541171 C9orf72Q96LT7 481 aa23.65■■□□□ 1.38
LEMD3-203ENST00000541171 TRIB3Q96RU7 358 aa23.65■■□□□ 1.38
LEMD3-203ENST00000541171 MAK16Q9BXY0 300 aaKnown RBP23.65■■□□□ 1.38
LEMD3-203ENST00000541171 EPN3Q9H201 632 aa23.65■■□□□ 1.38
LEMD3-203ENST00000541171 ZNF711Q9Y462 761 aa23.65■■□□□ 1.38
LEMD3-203ENST00000541171 MRPS18BQ9Y676 258 aaKnown RBP23.65■■□□□ 1.38
LEMD3-203ENST00000541171 SLC30A1Q9Y6M5 507 aa23.65■■□□□ 1.38
LEMD3-203ENST00000541171 MAST4O15021 2626 aa23.65■■□□□ 1.38
LEMD3-203ENST00000541171 UBR5O95071 2799 aaPredicted RBP23.65■■□□□ 1.38
LEMD3-203ENST00000541171 MN1Q10571 1320 aaPredicted RBP23.64■■□□□ 1.38
LEMD3-203ENST00000541171 GOLGA6L19H0YKK7 550 aa23.64■■□□□ 1.37
LEMD3-203ENST00000541171 UBXN7O94888 489 aa23.64■■□□□ 1.37
LEMD3-203ENST00000541171 ZNF7P17097 686 aaPredicted RBP23.64■■□□□ 1.37
LEMD3-203ENST00000541171 XRCC1P18887 633 aaPredicted RBP23.64■■□□□ 1.37
LEMD3-203ENST00000541171 TCN2P20062 427 aa23.64■■□□□ 1.37
LEMD3-203ENST00000541171 SLC19A1P41440 591 aa23.64■■□□□ 1.37
LEMD3-203ENST00000541171 COLEC12Q5KU26 742 aa23.64■■□□□ 1.37
LEMD3-203ENST00000541171 LRRTM4Q86VH4 590 aa23.64■■□□□ 1.37
LEMD3-203ENST00000541171 IMP4Q96G21 291 aaKnown RBP23.64■■□□□ 1.37
LEMD3-203ENST00000541171 ULBP3Q9BZM4 244 aa23.64■■□□□ 1.37
LEMD3-203ENST00000541171 MAGEE1Q9HCI5 957 aa23.64■■□□□ 1.37
LEMD3-203ENST00000541171 RAD18Q9NS91 495 aa23.64■■□□□ 1.37
LEMD3-203ENST00000541171 SIDT1Q9NXL6 827 aaKnown RBP23.64■■□□□ 1.37
LEMD3-203ENST00000541171 ZNF624Q9P2J8 865 aaPredicted RBP23.64■■□□□ 1.37
LEMD3-203ENST00000541171 TRIM10Q9UDY6 481 aa23.64■■□□□ 1.37
LEMD3-203ENST00000541171 LCMT1Q9UIC8 334 aa23.64■■□□□ 1.37
LEMD3-203ENST00000541171 APOL1O14791 398 aa23.63■■□□□ 1.37
LEMD3-203ENST00000541171 CHUKO15111 745 aa23.63■■□□□ 1.37
LEMD3-203ENST00000541171 KMOO15229 486 aa23.63■■□□□ 1.37
LEMD3-203ENST00000541171 ANKRD34CP0C6C1 535 aa23.63■■□□□ 1.37
LEMD3-203ENST00000541171 ZNF28P17035 718 aa23.63■■□□□ 1.37
LEMD3-203ENST00000541171 RPL10P27635 214 aaKnown RBP23.63■■□□□ 1.37
LEMD3-203ENST00000541171 STAT5AP42229 794 aa23.63■■□□□ 1.37
LEMD3-203ENST00000541171 DCDC1P59894 354 aa23.63■■□□□ 1.37
LEMD3-203ENST00000541171 MC1RQ01726 317 aa23.63■■□□□ 1.37
LEMD3-203ENST00000541171 CDK18Q07002 472 aa23.63■■□□□ 1.37
LEMD3-203ENST00000541171 ESX1Q8N693 406 aa23.63■■□□□ 1.37
LEMD3-203ENST00000541171 SPATA22Q8NHS9 363 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms