RNA–Protein interactions for RNA: ENST00000540987.1

POLE-215, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 3

Gene POLE, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-215	ENST00000540987	FASLG	P48023	281 aa		13.47	□□□□□ -0.25
POLE-215	ENST00000540987	TLE3	Q04726	772 aa		13.47	□□□□□ -0.25
POLE-215	ENST00000540987	PTPRCAP	Q14761	206 aa		13.47	□□□□□ -0.25
POLE-215	ENST00000540987	C16orf72	Q14CZ0	275 aa		13.47	□□□□□ -0.25
POLE-215	ENST00000540987	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	13.47	□□□□□ -0.25
POLE-215	ENST00000540987	NKAIN2	Q5VXU1	208 aa		13.47	□□□□□ -0.25
POLE-215	ENST00000540987	RAB11FIP2	Q7L804	512 aa		13.47	□□□□□ -0.25
POLE-215	ENST00000540987	ZNF547	Q8IVP9	402 aa		13.47	□□□□□ -0.25
POLE-215	ENST00000540987	KLHDC8B	Q8IXV7	354 aa		13.47	□□□□□ -0.25
POLE-215	ENST00000540987	TXLNB	Q8N3L3	684 aa		13.47	□□□□□ -0.25
POLE-215	ENST00000540987	UBL4B	Q8N7F7	174 aa		13.47	□□□□□ -0.25
POLE-215	ENST00000540987	TMEM74	Q96NL1	305 aa		13.47	□□□□□ -0.25
POLE-215	ENST00000540987	TRIM39	Q9HCM9	518 aa		13.47	□□□□□ -0.25
POLE-215	ENST00000540987	THSD1	Q9NS62	852 aa		13.47	□□□□□ -0.25
POLE-215	ENST00000540987	HACD3	Q9P035	362 aa		13.47	□□□□□ -0.25
POLE-215	ENST00000540987	SLC23A2	Q9UGH3	650 aa		13.47	□□□□□ -0.25
POLE-215	ENST00000540987	LOXL2	Q9Y4K0	774 aa		13.47	□□□□□ -0.25
POLE-215	ENST00000540987	CACNA1G	O43497	2377 aa		13.47	□□□□□ -0.25
POLE-215	ENST00000540987	IGSF10	Q6WRI0	2623 aa		13.47	□□□□□ -0.25
POLE-215	ENST00000540987	IGHV1OR21-1	A0A087WYE8	117 aa		13.46	□□□□□ -0.25
POLE-215	ENST00000540987	RRP8	O43159	456 aa	Known RBP	13.46	□□□□□ -0.25
POLE-215	ENST00000540987	SNX2	O60749	519 aa		13.46	□□□□□ -0.25
POLE-215	ENST00000540987	ANXA9	O76027	345 aa		13.46	□□□□□ -0.25
POLE-215	ENST00000540987	TNFSF15	O95150	251 aa		13.46	□□□□□ -0.25
POLE-215	ENST00000540987	CPNE6	O95741	557 aa		13.46	□□□□□ -0.25
POLE-215	ENST00000540987	ITGA2B	P08514	1039 aa		13.46	□□□□□ -0.25
POLE-215	ENST00000540987	RBMS1	P29558	406 aa	Known RBP	13.46	□□□□□ -0.25
POLE-215	ENST00000540987	ETV5	P41161	510 aa		13.46	□□□□□ -0.25
POLE-215	ENST00000540987	CETN2	P41208	172 aa		13.46	□□□□□ -0.25
POLE-215	ENST00000540987	GPR3	P46089	330 aa		13.46	□□□□□ -0.25
POLE-215	ENST00000540987	GDF10	P55107	478 aa		13.46	□□□□□ -0.25
POLE-215	ENST00000540987	GSDMD	P57764	484 aa		13.46	□□□□□ -0.25
POLE-215	ENST00000540987	CFHR1	Q03591	330 aa		13.46	□□□□□ -0.25
POLE-215	ENST00000540987	EIF3I	Q13347	325 aa	Known RBP	13.46	□□□□□ -0.25
POLE-215	ENST00000540987	MSLN	Q13421	630 aa	Predicted RBP	13.46	□□□□□ -0.25
POLE-215	ENST00000540987	PEX6	Q13608	980 aa		13.46	□□□□□ -0.25
POLE-215	ENST00000540987	CHRNA6	Q15825	494 aa		13.46	□□□□□ -0.25
POLE-215	ENST00000540987	FAM151B	Q6UXP7	276 aa		13.46	□□□□□ -0.25
POLE-215	ENST00000540987	RANBP10	Q6VN20	620 aa		13.46	□□□□□ -0.25
POLE-215	ENST00000540987	ZNF574	Q6ZN55	896 aa	Predicted RBP	13.46	□□□□□ -0.25
POLE-215	ENST00000540987	LRRC69	Q6ZNQ3	347 aa		13.46	□□□□□ -0.25
POLE-215	ENST00000540987	MICALCL	Q6ZW33	695 aa		13.46	□□□□□ -0.25
POLE-215	ENST00000540987	C11orf96	Q7Z7L8	435 aa		13.46	□□□□□ -0.25
POLE-215	ENST00000540987	FBXO39	Q8N4B4	442 aa		13.46	□□□□□ -0.25
POLE-215	ENST00000540987	ZNF248	Q8NDW4	579 aa		13.46	□□□□□ -0.25
POLE-215	ENST00000540987	SLC35B2	Q8TB61	432 aa		13.46	□□□□□ -0.25
POLE-215	ENST00000540987	STRADB	Q9C0K7	418 aa		13.46	□□□□□ -0.25
POLE-215	ENST00000540987	PRDM8	Q9NQV8	689 aa		13.46	□□□□□ -0.25
POLE-215	ENST00000540987	KLC4	Q9NSK0	619 aa		13.46	□□□□□ -0.25
POLE-215	ENST00000540987	TMEM9	Q9P0T7	183 aa		13.46	□□□□□ -0.25
POLE-215	ENST00000540987	SCHIP1	Q9P0W5	487 aa	Predicted RBP	13.46	□□□□□ -0.25
POLE-215	ENST00000540987	PISD	Q9UG56	409 aa		13.46	□□□□□ -0.25
POLE-215	ENST00000540987	KCTD3	Q9Y597	815 aa		13.46	□□□□□ -0.25
POLE-215	ENST00000540987	ARL5A	Q9Y689	179 aa		13.46	□□□□□ -0.25
POLE-215	ENST00000540987	IGHV5-10-1	A0A0J9YXX1	117 aa		13.45	□□□□□ -0.26
POLE-215	ENST00000540987	GOLGA6L6	A8MZA4	724 aa		13.45	□□□□□ -0.26
POLE-215	ENST00000540987	GPR89A	B7ZAQ6	455 aa		13.45	□□□□□ -0.26
POLE-215	ENST00000540987	TMX2-CTNND1	H3BSU7	103 aa		13.45	□□□□□ -0.26
POLE-215	ENST00000540987	UGT1A9	O60656	530 aa		13.45	□□□□□ -0.26
POLE-215	ENST00000540987	STK10	O94804	968 aa	Known RBP	13.45	□□□□□ -0.26
POLE-215	ENST00000540987	GPR89B	P0CG08	455 aa		13.45	□□□□□ -0.26
POLE-215	ENST00000540987	F3	P13726	295 aa		13.45	□□□□□ -0.26
POLE-215	ENST00000540987	HOXB3	P14651	431 aa	Predicted RBP	13.45	□□□□□ -0.26
POLE-215	ENST00000540987	ZNF7	P17097	686 aa	Predicted RBP	13.45	□□□□□ -0.26
POLE-215	ENST00000540987	UGT1A6	P19224	532 aa		13.45	□□□□□ -0.26
POLE-215	ENST00000540987	ITIH1	P19827	911 aa		13.45	□□□□□ -0.26
POLE-215	ENST00000540987	UGT1A1	P22309	533 aa		13.45	□□□□□ -0.26
POLE-215	ENST00000540987	UGT1A4	P22310	534 aa		13.45	□□□□□ -0.26
POLE-215	ENST00000540987	UGT1A3	P35503	534 aa		13.45	□□□□□ -0.26
POLE-215	ENST00000540987	MLLT3	P42568	568 aa	Predicted RBP	13.45	□□□□□ -0.26
POLE-215	ENST00000540987	TNNT3	P45378	269 aa	Predicted RBP	13.45	□□□□□ -0.26
POLE-215	ENST00000540987	CLCNKA	P51800	687 aa		13.45	□□□□□ -0.26
POLE-215	ENST00000540987	BIRC2	Q13490	618 aa		13.45	□□□□□ -0.26
POLE-215	ENST00000540987	SPARCL1	Q14515	664 aa		13.45	□□□□□ -0.26
POLE-215	ENST00000540987	PHF19	Q5T6S3	580 aa		13.45	□□□□□ -0.26
POLE-215	ENST00000540987	DENND5A	Q6IQ26	1287 aa		13.45	□□□□□ -0.26
POLE-215	ENST00000540987	IYD	Q6PHW0	289 aa		13.45	□□□□□ -0.26
POLE-215	ENST00000540987	USP53	Q70EK8	1073 aa		13.45	□□□□□ -0.26
POLE-215	ENST00000540987	LRRTM4	Q86VH4	590 aa		13.45	□□□□□ -0.26
POLE-215	ENST00000540987	FAM71D	Q8N9W8	422 aa		13.45	□□□□□ -0.26
POLE-215	ENST00000540987	DTX3L	Q8TDB6	740 aa		13.45	□□□□□ -0.26
POLE-215	ENST00000540987	KCNE4	Q8WWG9	221 aa		13.45	□□□□□ -0.26
POLE-215	ENST00000540987	ATG4A	Q8WYN0	398 aa		13.45	□□□□□ -0.26
POLE-215	ENST00000540987	CCDC74B	Q96LY2	380 aa		13.45	□□□□□ -0.26
POLE-215	ENST00000540987	FERMT1	Q9BQL6	677 aa		13.45	□□□□□ -0.26
POLE-215	ENST00000540987	TIMM29	Q9BSF4	260 aa		13.45	□□□□□ -0.26
POLE-215	ENST00000540987	OSGEPL1	Q9H4B0	414 aa		13.45	□□□□□ -0.26
POLE-215	ENST00000540987	PRORY	Q9H606	182 aa		13.45	□□□□□ -0.26
POLE-215	ENST00000540987	UGT1A7	Q9HAW7	530 aa		13.45	□□□□□ -0.26
POLE-215	ENST00000540987	UGT1A10	Q9HAW8	530 aa		13.45	□□□□□ -0.26
POLE-215	ENST00000540987	UGT1A8	Q9HAW9	530 aa		13.45	□□□□□ -0.26
POLE-215	ENST00000540987	SARS2	Q9NP81	518 aa	Known RBP	13.45	□□□□□ -0.26
POLE-215	ENST00000540987	KCNK4	Q9NYG8	393 aa		13.45	□□□□□ -0.26
POLE-215	ENST00000540987	GUCA1B	Q9UMX6	200 aa		13.45	□□□□□ -0.26
POLE-215	ENST00000540987	GLYATL1P3	A0A0U1RQE8	302 aa		13.44	□□□□□ -0.26
POLE-215	ENST00000540987	C5orf60	A6NFR6	353 aa		13.44	□□□□□ -0.26
POLE-215	ENST00000540987	ARHGAP6	O43182	974 aa		13.44	□□□□□ -0.26
POLE-215	ENST00000540987	VEGFD	O43915	354 aa		13.44	□□□□□ -0.26
POLE-215	ENST00000540987	METTL18	O95568	372 aa		13.44	□□□□□ -0.26
POLE-215	ENST00000540987	ZNF140	P52738	457 aa	Predicted RBP	13.44	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms