RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 CDKN1CP49918 316 aaPredicted RBP15.33■□□□□ 0.04
DDB1-218ENST00000540784 PLTPP55058 493 aa15.33■□□□□ 0.04
DDB1-218ENST00000540784 GUCY2DQ02846 1103 aa15.33■□□□□ 0.04
DDB1-218ENST00000540784 GTF2H3Q13889 308 aa15.33■□□□□ 0.04
DDB1-218ENST00000540784 ELOCQ15369 112 aa15.33■□□□□ 0.04
DDB1-218ENST00000540784 HIF1AQ16665 826 aa15.33■□□□□ 0.04
DDB1-218ENST00000540784 ANKRD20A4Q4UJ75 823 aa15.33■□□□□ 0.04
DDB1-218ENST00000540784 MSS51Q4VC12 460 aa15.33■□□□□ 0.04
DDB1-218ENST00000540784 PYCR3Q53H96 274 aa15.33■□□□□ 0.04
DDB1-218ENST00000540784 FASTKD1Q53R41 847 aaKnown RBP15.33■□□□□ 0.04
DDB1-218ENST00000540784 LYPLAL1Q5VWZ2 237 aa15.33■□□□□ 0.04
DDB1-218ENST00000540784 KCTD16Q68DU8 428 aa15.33■□□□□ 0.04
DDB1-218ENST00000540784 AFTPHQ6ULP2 937 aa15.33■□□□□ 0.04
DDB1-218ENST00000540784 SERPINA9Q86WD7 417 aa15.33■□□□□ 0.04
DDB1-218ENST00000540784 GALNT13Q8IUC8 556 aa15.33■□□□□ 0.04
DDB1-218ENST00000540784 NXPE1Q8N323 547 aa15.33■□□□□ 0.04
DDB1-218ENST00000540784 SDR16C5Q8N3Y7 309 aa15.33■□□□□ 0.04
DDB1-218ENST00000540784 FSTL5Q8N475 847 aaPredicted RBP15.33■□□□□ 0.04
DDB1-218ENST00000540784 DDHD1Q8NEL9 900 aa15.33■□□□□ 0.04
DDB1-218ENST00000540784 RHBDD1Q8TEB9 315 aa15.33■□□□□ 0.04
DDB1-218ENST00000540784 ART4Q93070 314 aa15.33■□□□□ 0.04
DDB1-218ENST00000540784 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.33■□□□□ 0.047e-10■■■■■ 41.2
DDB1-218ENST00000540784 DCUN1D1Q96GG9 259 aa15.33■□□□□ 0.04
DDB1-218ENST00000540784 SGSM3Q96HU1 749 aa15.33■□□□□ 0.04
DDB1-218ENST00000540784 FCRL3Q96P31 734 aaPredicted RBP15.33■□□□□ 0.04
DDB1-218ENST00000540784 COPS8Q99627 209 aa15.33■□□□□ 0.04
DDB1-218ENST00000540784 EBNA1BP2Q99848 306 aaKnown RBP15.33■□□□□ 0.04
DDB1-218ENST00000540784 NAT9Q9BTE0 207 aa15.33■□□□□ 0.04
DDB1-218ENST00000540784 ZCCHC2Q9C0B9 1178 aaKnown RBP15.33■□□□□ 0.04
DDB1-218ENST00000540784 TMEM168Q9H0V1 697 aa15.33■□□□□ 0.04
DDB1-218ENST00000540784 L2HGDHQ9H9P8 463 aa15.33■□□□□ 0.04
DDB1-218ENST00000540784 EPB41L5Q9HCM4 733 aa15.33■□□□□ 0.04
DDB1-218ENST00000540784 UCKL1Q9NWZ5 548 aa15.33■□□□□ 0.04
DDB1-218ENST00000540784 TRNAU1APQ9NX07 287 aaKnown RBP15.33■□□□□ 0.04
DDB1-218ENST00000540784 GRHL1Q9NZI5 618 aa15.33■□□□□ 0.04
DDB1-218ENST00000540784 CDV3Q9UKY7 258 aaKnown RBP15.33■□□□□ 0.04
DDB1-218ENST00000540784 DOLKQ9UPQ8 538 aa15.33■□□□□ 0.04
DDB1-218ENST00000540784 RPS6KL1Q9Y6S9 549 aa15.33■□□□□ 0.04
DDB1-218ENST00000540784 PTPRZ1P23471 2315 aaPredicted RBP15.33■□□□□ 0.04
DDB1-218ENST00000540784 CACNA1EQ15878 2313 aa15.32■□□□□ 0.04
DDB1-218ENST00000540784 SLC30A4O14863 429 aa15.32■□□□□ 0.04
DDB1-218ENST00000540784 FLRT2O43155 660 aa15.32■□□□□ 0.04
DDB1-218ENST00000540784 GRID2O43424 1007 aa15.32■□□□□ 0.04
DDB1-218ENST00000540784 SH3BP5O60239 455 aa15.32■□□□□ 0.04
DDB1-218ENST00000540784 DNAJC6O75061 913 aa15.32■□□□□ 0.04
DDB1-218ENST00000540784 POLBP06746 335 aa15.32■□□□□ 0.04
DDB1-218ENST00000540784 HOXD11P31277 338 aaPredicted RBP15.32■□□□□ 0.04
DDB1-218ENST00000540784 PPARGP37231 505 aaPredicted RBP15.32■□□□□ 0.04
DDB1-218ENST00000540784 GRK6P43250 576 aa15.32■□□□□ 0.04
DDB1-218ENST00000540784 TRADDQ15628 312 aa15.32■□□□□ 0.04
DDB1-218ENST00000540784 RSPO4Q2I0M5 234 aaPredicted RBP15.32■□□□□ 0.04
DDB1-218ENST00000540784 INAVAQ3KP66 663 aa15.32■□□□□ 0.04
DDB1-218ENST00000540784 KHDC1Q4VXA5 237 aaKnown RBP15.32■□□□□ 0.04
DDB1-218ENST00000540784 CERS6Q6ZMG9 384 aa15.32■□□□□ 0.04
DDB1-218ENST00000540784 KANSL1Q7Z3B3 1105 aa15.32■□□□□ 0.04
DDB1-218ENST00000540784 TMEM135Q86UB9 458 aa15.32■□□□□ 0.04
DDB1-218ENST00000540784 GKN2Q86XP6 184 aa15.32■□□□□ 0.04
DDB1-218ENST00000540784 CCNJLQ8IV13 435 aa15.32■□□□□ 0.04
DDB1-218ENST00000540784 PIANPQ8IYJ0 282 aa15.32■□□□□ 0.04
DDB1-218ENST00000540784 AGGF1Q8N302 714 aaeCLIP15.32■□□□□ 0.04
DDB1-218ENST00000540784 EID2Q8N6I1 236 aa15.32■□□□□ 0.04
DDB1-218ENST00000540784 ZNF548Q8NEK5 533 aaPredicted RBP15.32■□□□□ 0.04
DDB1-218ENST00000540784 SCG3Q8WXD2 468 aaKnown RBP15.32■□□□□ 0.04
DDB1-218ENST00000540784 LRRC39Q96DD0 335 aa15.32■□□□□ 0.04
DDB1-218ENST00000540784 LRRC61Q9BV99 259 aa15.32■□□□□ 0.04
DDB1-218ENST00000540784 CLPBQ9H078 707 aa15.32■□□□□ 0.04
DDB1-218ENST00000540784 ZDHHC3Q9NYG2 299 aa15.32■□□□□ 0.04
DDB1-218ENST00000540784 PRKAB1Q9Y478 270 aa15.32■□□□□ 0.04
DDB1-218ENST00000540784 KNL1Q8NG31 2342 aa15.32■□□□□ 0.04
DDB1-218ENST00000540784 FAM186AA6NE01 2351 aa15.31■□□□□ 0.04
DDB1-218ENST00000540784 TRBV5-4A0A0C4DH59 114 aa15.31■□□□□ 0.04
DDB1-218ENST00000540784 CFAP99D6REC4 459 aa15.31■□□□□ 0.04
DDB1-218ENST00000540784 LMO7DNF2Z398 122 aa15.31■□□□□ 0.04
DDB1-218ENST00000540784 CHUKO15111 745 aa15.31■□□□□ 0.04
DDB1-218ENST00000540784 YY2O15391 372 aa15.31■□□□□ 0.04
DDB1-218ENST00000540784 CD3EAPO15446 510 aaKnown RBP15.31■□□□□ 0.04
DDB1-218ENST00000540784 FFAR2O15552 330 aa15.31■□□□□ 0.04
DDB1-218ENST00000540784 BANF1O75531 89 aa15.31■□□□□ 0.04
DDB1-218ENST00000540784 USP1O94782 785 aa15.31■□□□□ 0.04
DDB1-218ENST00000540784 TTC4O95801 387 aa15.31■□□□□ 0.04
DDB1-218ENST00000540784 ANXA6P08133 673 aa15.31■□□□□ 0.04
DDB1-218ENST00000540784 PRSS56P0CW18 603 aa15.31■□□□□ 0.04
DDB1-218ENST00000540784 ALPPL2P10696 532 aa15.31■□□□□ 0.04
DDB1-218ENST00000540784 PGAM1P18669 254 aa15.31■□□□□ 0.04
DDB1-218ENST00000540784 ACRV1P26436 265 aa15.31■□□□□ 0.04
DDB1-218ENST00000540784 FOXN2P32314 431 aa15.31■□□□□ 0.04
DDB1-218ENST00000540784 ELK3P41970 407 aa15.31■□□□□ 0.04
DDB1-218ENST00000540784 ILF3Q12906 894 aaKnown RBP eCLIP15.31■□□□□ 0.04
DDB1-218ENST00000540784 PDIA2Q13087 525 aaKnown RBP15.31■□□□□ 0.04
DDB1-218ENST00000540784 TCEA2Q15560 299 aa15.31■□□□□ 0.04
DDB1-218ENST00000540784 HP1BP3Q5SSJ5 553 aaPredicted RBP15.31■□□□□ 0.04
DDB1-218ENST00000540784 PSAPL1Q6NUJ1 521 aa15.31■□□□□ 0.04
DDB1-218ENST00000540784 LVRNQ6Q4G3 990 aa15.31■□□□□ 0.04
DDB1-218ENST00000540784 MICALCLQ6ZW33 695 aa15.31■□□□□ 0.04
DDB1-218ENST00000540784 CENPUQ71F23 418 aa15.31■□□□□ 0.04
DDB1-218ENST00000540784 CHST15Q7LFX5 561 aaPredicted RBP15.31■□□□□ 0.04
DDB1-218ENST00000540784 TAF8Q7Z7C8 310 aa15.31■□□□□ 0.04
DDB1-218ENST00000540784 SDCCAG8Q86SQ7 713 aaPredicted RBP15.31■□□□□ 0.04
DDB1-218ENST00000540784 RASGEF1AQ8N9B8 481 aa15.31■□□□□ 0.04
DDB1-218ENST00000540784 GPBAR1Q8TDU6 330 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms