RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 MED16Q9Y2X0 877 aa14.01□□□□□ -0.17
INO80E-203ENST00000540562 POLR3HQ9Y535 204 aaPredicted RBP14.01□□□□□ -0.17
INO80E-203ENST00000540562 PCDHB9Q9Y5E1 797 aa14.01□□□□□ -0.17
INO80E-203ENST00000540562 PCDHB5Q9Y5E4 795 aa14.01□□□□□ -0.17
INO80E-203ENST00000540562 ASPDHA6ND91 283 aa14□□□□□ -0.17
INO80E-203ENST00000540562 F5H5T6 163 aa14□□□□□ -0.17
INO80E-203ENST00000540562 K7ERQ8 282 aa14□□□□□ -0.17
INO80E-203ENST00000540562 GSNP06396 782 aa14□□□□□ -0.17
INO80E-203ENST00000540562 KCTD21Q4G0X4 260 aa14□□□□□ -0.17
INO80E-203ENST00000540562 FUBP1Q96AE4 644 aaKnown RBP14□□□□□ -0.17
INO80E-203ENST00000540562 RPF2Q9H7B2 306 aaKnown RBP14□□□□□ -0.17
INO80E-203ENST00000540562 HACD3Q9P035 362 aa14□□□□□ -0.17
INO80E-203ENST00000540562 VPS28Q9UK41 221 aa14□□□□□ -0.17
INO80E-203ENST00000540562 VPS4AQ9UN37 437 aa14□□□□□ -0.17
INO80E-203ENST00000540562 FCF1Q9Y324 198 aaKnown RBP14□□□□□ -0.17
INO80E-203ENST00000540562 A0A1W2PPW3 197 aa14□□□□□ -0.17
INO80E-203ENST00000540562 H3BNH8 94 aa14□□□□□ -0.17
INO80E-203ENST00000540562 EFNA1P20827 205 aaPredicted RBP14□□□□□ -0.17
INO80E-203ENST00000540562 PRKACGP22612 351 aa14□□□□□ -0.17
INO80E-203ENST00000540562 HOXC13P31276 330 aa14□□□□□ -0.17
INO80E-203ENST00000540562 RAD51Q06609 339 aa14□□□□□ -0.17
INO80E-203ENST00000540562 APOFQ13790 326 aa14□□□□□ -0.17
INO80E-203ENST00000540562 IMPG1Q17R60 797 aa14□□□□□ -0.17
INO80E-203ENST00000540562 NHSL2Q5HYW2 709 aa14□□□□□ -0.17
INO80E-203ENST00000540562 RTP2Q5QGT7 225 aa14□□□□□ -0.17
INO80E-203ENST00000540562 FRA10AC1Q70Z53 315 aa14□□□□□ -0.17
INO80E-203ENST00000540562 ERMP1Q7Z2K6 904 aa14□□□□□ -0.17
INO80E-203ENST00000540562 TMCO2Q7Z6W1 182 aaPredicted RBP14□□□□□ -0.17
INO80E-203ENST00000540562 ANKRD46Q86W74 232 aa14□□□□□ -0.17
INO80E-203ENST00000540562 CARM1Q86X55 608 aa14□□□□□ -0.17
INO80E-203ENST00000540562 CDC26Q8NHZ8 85 aa14□□□□□ -0.17
INO80E-203ENST00000540562 METTL6Q8TCB7 284 aa14□□□□□ -0.17
INO80E-203ENST00000540562 PTCD2Q8WV60 388 aaKnown RBP14□□□□□ -0.17
INO80E-203ENST00000540562 SLC39A13Q96H72 371 aa14□□□□□ -0.17
INO80E-203ENST00000540562 AARSD1Q9BTE6 412 aaKnown RBP14□□□□□ -0.17
INO80E-203ENST00000540562 BOCQ9BWV1 1114 aa14□□□□□ -0.17
INO80E-203ENST00000540562 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14□□□□□ -0.17
INO80E-203ENST00000540562 TMEM248Q9NWD8 314 aa14□□□□□ -0.17
INO80E-203ENST00000540562 SUN2Q9UH99 717 aa14□□□□□ -0.17
INO80E-203ENST00000540562 ZNF236Q9UL36 1845 aa14□□□□□ -0.17
INO80E-203ENST00000540562 KCNH1O95259 989 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 ZBTB11O95625 1053 aaPredicted RBP13.99□□□□□ -0.17
INO80E-203ENST00000540562 CAPN1P07384 714 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 G6PDP11413 515 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 DNAJB2P25686 324 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 HSPA7P48741 367 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 LCP2Q13094 533 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 INPP5AQ14642 412 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 SETMARQ53H47 684 aaPredicted RBP13.99□□□□□ -0.17
INO80E-203ENST00000540562 GALNT10Q86SR1 603 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 CLEC4FQ8N1N0 589 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 GABPB2Q8TAK5 448 aaPredicted RBP13.99□□□□□ -0.17
INO80E-203ENST00000540562 STAG3L4Q8TBR4 150 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 EGFL8Q99944 293 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 HAUS8Q9BT25 410 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 SLC2A11Q9BYW1 496 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 TRMT6Q9UJA5 497 aaKnown RBP13.99□□□□□ -0.17
INO80E-203ENST00000540562 FADS3Q9Y5Q0 445 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 PRKAR2AP13861 404 aaKnown RBP13.99□□□□□ -0.17
INO80E-203ENST00000540562 UGT1A1P22309 533 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 UGT1A4P22310 534 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 ADSLP30566 484 aaPredicted RBP13.99□□□□□ -0.17
INO80E-203ENST00000540562 CA5AP35218 305 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 UGT1A3P35503 534 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 UGT1A5P35504 534 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 CLCN2P51788 898 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 MERTKQ12866 999 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 MBTPS1Q14703 1052 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 GTDC1Q4AE62 458 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 LETMD1Q6P1Q0 360 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 GPR141Q7Z602 305 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 STK32CQ86UX6 486 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 PHACTR4Q8IZ21 702 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 MIPOL1Q8TD10 442 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 PLEKHG4BQ96PX9 1271 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 NSUN3Q9H649 340 aaKnown RBP13.99□□□□□ -0.17
INO80E-203ENST00000540562 CLK4Q9HAZ1 481 aaKnown RBP13.99□□□□□ -0.17
INO80E-203ENST00000540562 SCUBE2Q9NQ36 999 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 PNPLA3Q9NST1 481 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 DOLKQ9UPQ8 538 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 ZNF711Q9Y462 761 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 DLGAP1O14490 977 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 STX7O15400 261 aaKnown RBP13.99□□□□□ -0.17
INO80E-203ENST00000540562 RSL1D1O76021 490 aaKnown RBP13.99□□□□□ -0.17
INO80E-203ENST00000540562 CYP11A1P05108 521 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 IL7RP16871 459 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 CD247P20963 164 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 TPD52P55327 224 aaPredicted RBP13.99□□□□□ -0.17
INO80E-203ENST00000540562 HPCAP84074 193 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 PMS2P3Q13401 168 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 AFMIDQ63HM1 303 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 NANOGP8Q6NSW7 305 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 DCP1BQ8IZD4 617 aaKnown RBP13.99□□□□□ -0.17
INO80E-203ENST00000540562 BPIFB6Q8NFQ5 453 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 BRSK1Q8TDC3 778 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 THUMPD3Q9BV44 507 aaKnown RBP13.99□□□□□ -0.17
INO80E-203ENST00000540562 NANOGQ9H9S0 305 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 ZFYVE28Q9HCC9 887 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 NMRK2Q9NPI5 230 aa13.99□□□□□ -0.17
INO80E-203ENST00000540562 ATXN10Q9UBB4 475 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms